mRNA_P-wetherbeei_contig835.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: A0A7S2W251_9STRA (Glycine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W251_9STRA) HSP 1 Score: 370 bits (949), Expect = 3.180e-118 Identity = 182/276 (65.94%), Postives = 212/276 (76.81%), Query Frame = 1
Query: 19 EDIAQFLTNSEDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADKSVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCDICAQHPADVSGALKVDAIIRSGISRFTDEVGRLWAKLADYYIRLGQLERARDVYEEAIN 846
EDI + L + E + +EEEI+RNP+ L +W RYL K+ A + R L ERAL LPRSYKLWRQYL ER A + KSV D I+VN +ERALVHLHKMPR+WLDY L LQRGT TRR +DRALQAL +TQH +W YL+WV+ F ETAV++YRRYLM D REE+VDYL S G + EAA+QLA CVNDD+FVS GHSKHQMWMRLCD+CA+HP +V G LKVDAIIRSG++RFTDEVGRLW KLADYYIRLGQ ERARDV+EE IN
Sbjct: 1 EDITRILEDEEAIRYEEEISRNPFILNSWLRYLDFKKRARPRERFFLFERALRCLPRSYKLWRQYLQERQAQIKGKSVTDKRNTILVNTYERALVHLHKMPRIWLDYCELLMNLQRGTRTRRTFDRALQALPVTQHDRIWSLYLQWVQDFAVKETAVKIYRRYLMYDPQHREEFVDYLVSVGHYDEAAQQLAECVNDDNFVSPGGHSKHQMWMRLCDMCAKHPEEV-GTLKVDAIIRSGLARFTDEVGRLWCKLADYYIRLGQFERARDVFEEGIN 275
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: K8YQA2_NANGC (Pre-mRNA-splicing factor SYF1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQA2_NANGC) HSP 1 Score: 327 bits (837), Expect = 2.120e-101 Identity = 162/279 (58.06%), Postives = 200/279 (71.68%), Query Frame = 1
Query: 13 LGEDIAQFLTNSEDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADK-SVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCDICAQHPADVSGALKVDAIIRSGISRFTDEVGRLWAKLADYYIRLGQLERARDVYEEAIN 846
+ ++I L + +D EFEEEIARNP+ LK+W RYL AK A R +++ERAL FLP SYKLW YL ER V + V P QI++N FERALVHL +MPR+WLDY L +++ T TRRA+D ALQ+L ITQH +W YL W + G ETA+RV+RRYL D ++RE YVD++E G EAA LA CVNDD+F S G SKH +WMRLCD+CA+HP +S LKVDAIIRSG++RFTDE G+LW KLADYYIR GQ ERARDVYEEA++
Sbjct: 15 VSDEIRALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLHTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALS 293
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: A0A7S3YB58_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YB58_HETAK) HSP 1 Score: 290 bits (743), Expect = 1.060e-95 Identity = 137/216 (63.43%), Postives = 162/216 (75.00%), Query Frame = 1
Query: 22 DIAQFLTNSEDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADKSVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCD 669
DI FL + D E+EEEI+RNPY LK+WWRYL K+ A K R +++ERAL FLP S+KLW YL ER AV DKSV DPA ++V NA+ERALV LHKMPR+WLDY A L QRGT RRA+DRAL+AL +TQHHLVW YL W + FG+ E+ +RVYRR+LM D RE+YVDYL S G WGEAA QLARCVNDD FV G +KH++WMRLCD
Sbjct: 26 DIKSFLESEADFEYEEEISRNPYALKSWWRYLDHKKNARPKTRYVVYERALKFLPGSFKLWHSYLKERTLAVEDKSVLDPAREVVANAYERALVTLHKMPRVWLDYCALLVAAQRGTRARRAFDRALRALPVTQHHLVWEHYLAWAQGFGSPESCIRVYRRFLMYDPQGREDYVDYLASIGEWGEAAAQLARCVNDDEFVGTKGTTKHKLWMRLCD 241
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: K1Q7X3_CRAGI (Pre-mRNA-splicing factor SYF1 n=3 Tax=Crassostrea TaxID=6564 RepID=K1Q7X3_CRAGI) HSP 1 Score: 302 bits (773), Expect = 4.140e-93 Identity = 148/265 (55.85%), Postives = 190/265 (71.70%), Query Frame = 1
Query: 49 EDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADKSVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCDICAQHPADVSGALKVDAIIRSGISRFTDEVGRLWAKLADYYIRLGQLERARDVYEEAI 843
+DL FEEEI RNPY +K+W RYL+ K+ A R N+++ERAL LP SYKLW YL R V + ++DPA + V+NA ERALV +HKMPR+W+DY FL R T TRR +DRAL+AL ITQHH +WP+YL++VR + ETA+RVYRR+L L EEY+DYL G EAA +L +NDDSFVS AG SKHQ+W LCD+ A++P V+ +LK++ IIR G+ R+TD++G LW +ADYYIR G ERARD+YEEAI
Sbjct: 20 DDLPFEEEILRNPYSVKSWLRYLEYKKEAPRSTVNLIYERALKELPGSYKLWYNYLKLRRRQVKGRCLNDPAIEDVINAHERALVFMHKMPRIWIDYCQFLVDYSRITKTRRTFDRALRALPITQHHRIWPRYLKFVRLYDLPETAIRVYRRHLKLQKENTEEYIDYLMKIGWLDEAANKLVDIINDDSFVSRAGKSKHQLWNELCDLVAKNPDKVT-SLKIEPIIRQGLKRYTDQIGVLWNSMADYYIRGGHFERARDIYEEAI 283
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: UPI000154AAA9 (XPA binding protein 2, isoform CRA_c n=2 Tax=Boreoeutheria TaxID=1437010 RepID=UPI000154AAA9) HSP 1 Score: 287 bits (734), Expect = 2.620e-92 Identity = 148/265 (55.85%), Postives = 185/265 (69.81%), Query Frame = 1
Query: 49 EDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADKSVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCDICAQHPADVSGALKVDAIIRSGISRFTDEVGRLWAKLADYYIRLGQLERARDVYEEAI 843
EDL +EEEI RN + +K W RY++ K+GA + N L+ERAL LP SYKLW +YL R A V + V DPA + V N ERA V +HKMPRLWLDY FL R T TRR +DRAL+AL ITQH +WP YL ++R+ ETAVR YRR+L L EEY++YL+SS EAA++LA VND+ FVS AG S +Q+W LCD+ +Q+P V +L VDAIIR G++RFTD++G+LW LADYYIR G E+ARDVYEEAI
Sbjct: 20 EDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQ-SLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAI 283
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: A0A139WI48_TRICA (Pre-mRNA-splicing factor SYF1-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WI48_TRICA) HSP 1 Score: 286 bits (732), Expect = 3.860e-92 Identity = 141/271 (52.03%), Postives = 188/271 (69.37%), Query Frame = 1
Query: 31 QFLTNSEDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADKSVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCDICAQHPADVSGALKVDAIIRSGISRFTDEVGRLWAKLADYYIRLGQLERARDVYEEAI 843
+ + EDL +EEEI RNPY +K W RY++ K+ A + NI++ERAL LP SYKLW YL R V ++ + DPA + V NAFER+LV +HKMPR+W+DY +FL + T TR+ +DRAL+AL +TQHH +WP YL +V+ ETAVR++RRYL L EEYV+YL G EAA LA+ VND++FVS G SKHQ+W LC++ +++P +V +L VDAIIR G+ R+TD++G LW LA YY+R G ERARD+YEEAI
Sbjct: 15 EIIFTDEDLPYEEEILRNPYSVKHWLRYIEHKKKAPKHGVNIIYERALKELPGSYKLWYNYLRTRRLQVKNRCITDPAFEEVNNAFERSLVFMHKMPRIWMDYCSFLTDQCKITRTRKVFDRALRALPVTQHHRIWPLYLTFVKKHDISETAVRIFRRYLKLSPENAEEYVEYLTEVGRLDEAAVVLAKIVNDENFVSQHGKSKHQLWNELCELISKNPEEVH-SLNVDAIIRGGLRRYTDQLGHLWNSLATYYVRSGLFERARDIYEEAI 284
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: A0A7S0HW82_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HW82_9EUKA) HSP 1 Score: 283 bits (725), Expect = 1.140e-91 Identity = 140/270 (51.85%), Postives = 185/270 (68.52%), Query Frame = 1
Query: 37 LTNSEDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADKSVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCDICAQHPADVSGALKVDAIIRSGISRFTDEVGRLWAKLADYYIRLGQLERARDVYEEAIN 846
L + DL +EE+I RN Y LK WWRY++AK+ A K RN++ ERAL +LP SYK+W YL +R V + +DPA + + +ERALV +HKMPR+WLDY FL R T TR+ +DRAL+AL ITQH +W ++++ + ETAVRVYRRY+ + EEYVD+L S G GEAA +LA +N +SFVS G S+H++WM LCD+ +HP +V G L+V+AII SG+ FTDE G LW LADY+IR Q E+ARDVYEE I+
Sbjct: 9 LDDDTDLLYEEDILRNGYSLKYWWRYMEAKQRAPAKQRNMIAERALKYLPGSYKVWHHYLKDRRQQVLHRRPEDPAIENLNRTYERALVTMHKMPRIWLDYLEFLLGQHRTTVTRQKFDRALRALPITQHETIWKLFVQFAKECPIKETAVRVYRRYVQFEPEGAEEYVDFLLSIGRVGEAALKLAELLNRESFVSMRGKSRHKLWMELCDLVCKHPQEVKG-LRVEAIIHSGLRTFTDEAGHLWGALADYFIRQAQFEQARDVYEEGIS 277
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: A0A673G278_9TELE (XPA binding protein 2 n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673G278_9TELE) HSP 1 Score: 289 bits (739), Expect = 1.590e-91 Identity = 149/280 (53.21%), Postives = 189/280 (67.50%), Query Frame = 1
Query: 4 IPTLGEDIAQFLTNSEDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADKSVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCDICAQHPADVSGALKVDAIIRSGISRFTDEVGRLWAKLADYYIRLGQLERARDVYEEAI 843
+PTL A L +DL +EEEI RNPY +K W RY++ K+ A + N+++ERAL LP SYKLW YL ER V K V DPA + V N ERALV +HKMPR+W+DY + + T +RR +DRAL+AL ITQH +WP YL + R ETA+RVYRRYL L EEY+DYL S G EAA +LA VND++FVS G S +Q+W LCD+ +Q+P V+ +LKV AIIR G++RFTD++G+LW LADYYIR G E+ARDVYEEAI
Sbjct: 1 MPTLSGK-ADVLFEDDDLPYEEEIIRNPYSVKCWMRYIEHKQNAQKSVLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERALVFMHKMPRIWIDYCQLMVSQCKITRSRRTFDRALRALPITQHPRIWPLYLRFARNLPLPETAIRVYRRYLKLSPENAEEYIDYLRSVGRLDEAAIRLAAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVT-SLKVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAI 278
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: K7FDD3_PELSI (XPA binding protein 2 n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FDD3_PELSI) HSP 1 Score: 291 bits (744), Expect = 4.440e-91 Identity = 147/265 (55.47%), Postives = 186/265 (70.19%), Query Frame = 1
Query: 49 EDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADKSVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCDICAQHPADVSGALKVDAIIRSGISRFTDEVGRLWAKLADYYIRLGQLERARDVYEEAI 843
EDL++EEEI RNP+ +K W RY++ K+ A R+ N+++ERAL LP SYKLW YL +R V ++ V DP + V N ERALV +HKMPR+WLDY FL R T TRR +DRAL+AL ITQHH +WP YL++VR + ETAVRVYRRYL L EEY++YL S EAA +LA VND+ FVS G S +Q+W LCD+ +Q+P V +L V AIIR G++RFTD++G+LW LADYYIR G E+ARDVYEEAI
Sbjct: 84 EDLQYEEEILRNPFSVKCWIRYIEFKQNAPRQVLNLIYERALKELPGSYKLWYNYLKQRRKQVKNRCVTDPGYEEVNNCHERALVFMHKMPRIWLDYCQFLMDQCRITRTRRTFDRALRALPITQHHRIWPLYLKFVRLYPLPETAVRVYRRYLKLSPENAEEYIEYLRSIDRLDEAALRLAVIVNDERFVSKEGKSNYQLWHELCDLISQNPDKVK-SLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAI 347
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Match: D7G3C6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C6_ECTSI) HSP 1 Score: 287 bits (735), Expect = 5.510e-91 Identity = 154/279 (55.20%), Postives = 174/279 (62.37%), Query Frame = 1
Query: 10 TLGEDIAQFLTNSEDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARNILHERALHFLPRSYKLWRQYLGERVAAVADKSVDDPACQIVVNAFERALVHLHKMPRLWLDYTAFLARLQRGTATRRAYDRALQALAITQHHLVWPQYLEWVRAFGALETAVRVYRRYLMLDGARREEYVDYLESSGLWGEAARQLARCVNDDSFVSAAGHSKHQMWMRLCDICAQHPADVSGALKVDAIIRSGISRFTDEVGRLWAKLADYYIRLGQLERARDVYEEAIN 846
+LG+DI +FL N +D+EFEEEI+RNPY+LK+WWRYL AK GA RK RNI+HERAL FLP SYKLW QYL ER AAV K + DPACQIVVNA ERAL+ WP YLEW + FG ETAVRV+RRYLM D A RE+YVDYLE+ G W EAA+QL CVND+ F+S +VDAIIRSG+SRFTDEVGRLW KLADYYIRLGQ ERARDVYEEAIN
Sbjct: 11 SLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERALI--------------------------------------------WPPYLEWAKGFGVRETAVRVFRRYLMFDPAHREDYVDYLETEGQWEEAAKQLGICVNDEDFLSP---------------------------QVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAIN 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig835.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig835.2.1 >prot_P-wetherbeei_contig835.2.1 ID=prot_P-wetherbeei_contig835.2.1|Name=mRNA_P-wetherbeei_contig835.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=282bp MIPTLGEDIAQFLTNSEDLEFEEEIARNPYKLKAWWRYLQAKRGASRKARback to top mRNA from alignment at P-wetherbeei_contig835:97..942- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig835.2.1 ID=mRNA_P-wetherbeei_contig835.2.1|Name=mRNA_P-wetherbeei_contig835.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=846bp|location=Sequence derived from alignment at P-wetherbeei_contig835:97..942- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig835:97..942- >mRNA_P-wetherbeei_contig835.2.1 ID=mRNA_P-wetherbeei_contig835.2.1|Name=mRNA_P-wetherbeei_contig835.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=846bp|location=Sequence derived from alignment at P-wetherbeei_contig835:97..942- (Phaeothamnion wetherbeei SAG_119_79)back to top |