mRNA_P-wetherbeei_contig83.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig83.5.1
Unique NamemRNA_P-wetherbeei_contig83.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: D8LM34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM34_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 4.100e-96
Identity = 200/392 (51.02%), Postives = 252/392 (64.29%), Query Frame = 3
Query:   30 DESMHHWFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVCPLALSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAGGRGDDREGDAAEEDEMNAAAEVEAEDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFATLERAPEPAVRANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRIKAAE 1205
            D  M  WF AAEQAI  +F L+  PEA    VVR++  +TL     ++    P AL+RLCFV GH+ALK+LVY+E L   ++  RA                       XXXXXXX     TA                    E+   AE  AEDE+R  E++E EIVGRNLLGA GPL+ RLVADE G +GHPL+RES+VLAL KFM +S AFCER+L LLF TLER+ + AVRANI+VALGDLAFRFPNA+EP+NP +Y RL+D S  VRANA+MVLTHL+LNDM+KVKG VS +A C+ D+EPRIQ  A++FF + S+RG +P+YN +PDIVG LS   T           + P +++ IM FL+ +V+KDK  E LAEKLC R+ A+E
Sbjct:  922 DAEMKSWFAAAEQAIAVLFHLNRAPEALGAAVVRRIAADTL-----SSDSASPHALARLCFVLGHLALKLLVYSEDLAGNLERARAKVK--------------PPTKEKXXXXXXXXXXXATA-------------------QELGLNAEASAEDEQRLTELVEKEIVGRNLLGAFGPLLVRLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERSNDTAVRANIIVALGDLAFRFPNALEPWNPHIYNRLKDDSPGVRANAIMVLTHLILNDMVKVKGQVSALAVCMVDEEPRIQDAAKVFFNKYSERGTNPVYNVLPDIVGRLSLDET-----------LDPHEYQEIMDFLMQYVKKDKLTELLAEKLCARLAASE 1264          
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: A0A836CLB4_9STRA (Non-SMC mitotic condensation complex subunit 1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB4_9STRA)

HSP 1 Score: 316 bits (810), Expect = 3.710e-87
Identity = 266/600 (44.33%), Postives = 333/600 (55.50%), Query Frame = 3
Query:   12 PGAEGGDESMHHWFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVCPLALSRLCFVA----------------------GHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAGGRGDDREGDAAEEDEMNAAAEVEAEDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFATLERAPEPA------VRANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRIKAAEEGGSGTGXXXXXKDESGSAVEXXXXXXXXXXXXXXEGGSATRNSXXXXXXXXXXXXXXXXXXGLFGSFKDGSPGGGGAGYEQQQRDMAYCLTQLKLTDKLLKTLVALLPSYKAA-------LRDDDVHKSFAGIAARAKKSTKAELKELGEELEKQVEIHHQGEAEEAGTSRRA 1706
            P AEG    M  WF AAE A+GA+FR +PRPEAAC  VVR    +TL     AAA   PL+L RLCF+A                      GH AL++LVY E L  R+K  RA    +G     XXXXXXXXX          DA+                 G          +AE +A+D+R F ++++ EIVGRNLLG  GPL+AR+VA+E G +GHPLLRESAVLAL K+M VS A CER+L LLF  L  A   A      +R+ IVVALGDLAFRFPNA+EP+  RMY  LRD +  VR +AL+VLTHL+LNDM+KVKG VSEIA  + D  PR++  A+LFF ELSKRG++PIYN +PDIV  LS+              + P  FR IM FLL F++KD+ AEGL +KLC R+ AA +           +D +    +  XXXXXXXXXXXX         XXXXXXXXXXXXXXXX                      ++RD        ++T+K +K L   + +YK A       L D +V+  F  +AARAKK  K EL+   EE E  +   H G A+  G + RA
Sbjct:  941 PNAEG---DMDAWFAAAEAALGALFRHAPRPEAACAGVVRAAAAQTLCLDTGAAAA-SPLSLMRLCFIAXXXXXXXXXXXXXXXXXXXXIVGHAALRLLVYAEDLASRIK--RARGDGSGXXXXXXXXXXXXXXKLKGAAAQQGDASDGDXXXXXXXXXXXXXTG--------GTSAEQDADDDRMFQDLVDREIVGRNLLGLFGPLLARIVANEDGAFGHPLLRESAVLALAKYMCVSAAACERYLPLLFTALAAAAPAAAARGAQLRSTIVVALGDLAFRFPNALEPWGARMYACLRDSAPRVRGDALLVLTHLILNDMVKVKGQVSEIALRLRDALPRLRDAAKLFFTELSKRGDNPIYNLLPDIVSRLSQEP-----------DLPPGGFREIMGFLLSFIKKDRQAEGLLDKLCARVAAAADA------PQQRRDLAYCLAQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL---------------------RRRDXXXXXXXXQVTEKGVKRLAESIATYKDAFGGAEDALGDAEVYGHFQALAARAKKFAKPELRAAVEEWEAAMAQLHAGGADNEGAATRA 1488          
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: A0A7S4MY57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MY57_9STRA)

HSP 1 Score: 303 bits (775), Expect = 8.890e-84
Identity = 185/395 (46.84%), Postives = 228/395 (57.72%), Query Frame = 3
Query:   48 WFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVCP-LALSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAGGRGDDREGDA----------AEEDEMNAAAEVEAEDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFATLERAP--EPAVRANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRI 1193
            WF AAEQAI AIF + P PE AC  V+R L   T           C  L L+RL FV GH+ALK+LVYTE L   ++   AA   A                         ++A K    KK  G                   A E E+  A E EAE ER+  E+ E EIVGR L+GA GPL+ R+V +E G++   +L +SA LALCKFM +S AFCE+HL LLF+ L  AP  +  +RAN VVALGDLAFRFPNA+EPY P +Y  LRD S  VR + LMVLTHL+LNDM+KVKG V EIA C+ D+E RI+ MA+L F ELSKR N+PIYN +PDIV  LS+     D             FR+IM+FLL F++KD+  E L +KLC R 
Sbjct:  628 WFSAAEQAIDAIFVVWPEPEHACADVIRVLEASTFGVGGGDRNSTCSSLRLARLFFVLGHIALKLLVYTENLSGAVRRANAAKTLA-----------------------KQESADKAKVAKKNKGXXXXXXXXXXXXXXXXXXXAMEAELGLAQEAEAETERQVAEISEKEIVGRGLIGAFGPLLVRVVGNEGGIFNSEILMQSATLALCKFMCISSAFCEKHLPLLFSALANAPSEDTTLRANTVVALGDLAFRFPNAIEPYTPHLYACLRDTSTRVRRHTLMVLTHLILNDMVKVKGQVCEIAMCLQDNEARIRDMARLLFFELSKRSNNPIYNLLPDIVSQLSQMGLKRD------------DFRSIMSFLLSFIKKDRQTEMLVDKLCQRF 987          
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: A0A7S2A7H4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7H4_TRICV)

HSP 1 Score: 286 bits (733), Expect = 5.670e-83
Identity = 177/387 (45.74%), Postives = 217/387 (56.07%), Query Frame = 3
Query:   48 WFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVCP-LALSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAG--GRGDDREGDAAEEDEMNAAAEVEAEDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFATLERAP--EPAVRANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRI 1193
            WF AAEQAI AIF + P PE AC  ++R L   T    N      C  L L+R  FV GH+ALK+LVYTE L   ++   AA   A                         + A K   +KK+G   RG+D                     E+R  E+ E EIVGR L+GA GPL+ R+V +E G++   +L +SA LALCK MS+S  FCE+HL LLF  L  AP  +  +RAN VVALGDLAFRFPNAVEPY PR+Y  LRD S  VR + LMVLTHL+LNDMIKVKG V EIA          + MA+L F ELSKR N+PIYN +PDIV  LS+              V  + FR IM+FLLGF++K++  E L EKLC R 
Sbjct:    2 WFSAAEQAINAIFVIWPEPEHACADIIRVLEASTFGVSNGEMKSSCSSLRLARFFFVLGHIALKLLVYTENLSGLVRRANAAKTLA-----------------------KQENADKAKAQKKSGKANRGEDSXXXXXXXXXXXXXXXXXXXTEQRVAEISEKEIVGRGLIGAFGPLLVRVVGNEGGLFSSEILMQSATLALCKVMSISSTFCEKHLPLLFTALANAPSHDTTLRANTVVALGDLAFRFPNAVEPYTPRLYACLRDKSTRVRRHTLMVLTHLILNDMIKVKGQVCEIAXXXXXXXXXXRDMARLLFFELSKRSNNPIYNLLPDIVSQLSQM------------GVLKDDFRNIMSFLLGFIKKERQIEMLVEKLCHRF 353          
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: A0A7S2DPP1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPP1_9STRA)

HSP 1 Score: 287 bits (734), Expect = 1.000e-82
Identity = 192/540 (35.56%), Postives = 273/540 (50.56%), Query Frame = 3
Query:   48 WFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVCPLALSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAGGRGDDREGDAAEEDEM-------NAAAEVEAEDERRFGEVIEHEIVG-RNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFAT-LERAPEPAVRANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRIKAAEEGGSGTGXXXXXKDESGSAVEXXXXXXXXXXXXXXEGGSATRNSXXXXXXXXXXXXXXXXXXGLFGSFKDGSPGGGGAGYEQQQRDMAYCLTQLKLTDKLLKTLVALLPSYKAALRDDDVHKSFAGIAARAKKSTKAELKELGEE 1640
            WF AAEQ++ AIF ++  PE  C  +++   +   ++   A   V    LSRLCF+ G V+L++L+YTE+  R++K  +                               +A  K      +G  GDD +  + +E+ M       NA AE++   E+R  ++IE+ IVG  +LL A  P++ R+VA+E+G +   L++E+A LALCK+M VSG+ CER+L L+    L   P P+VR+N++VA+GDLA RFPN +EPY   +Y +L D  A VR  +LMVLTHL+LNDMIKVKG VSE+A C+ DD+   + +A++FF ELSKR N+PIYN +PD+V  LS+ +            V    FR IMTFL+ FV  DKH+  L EKLC R  + +E                                                                                   +DMAYCL QL++ DK+L  L AL  +YK  L D+DV++SF  +A +AKK  K E KEL  E
Sbjct:    1 WFQAAEQSLTAIFHIAAEPEQVCERLIKSAERSVFVKEPGAGPQVRAARLSRLCFLVGEVSLQLLLYTEEQARQLKRLK-----------------------------NKEAEGKQHEGGMSGDCGDDGKAGSKDEESMEEQLGMSNAEAEMDCF-EQRVADMIENHIVGGSSLLAAFEPMLVRVVANEKGQFSGRLIQEAATLALCKYMCVSGSVCERYLPLVLTNCLLEHPLPSVRSNVMVAMGDLASRFPNKIEPYTHHLYAKLHDDDAKVRTRSLMVLTHLILNDMIKVKGQVSEMACCLEDDDESTKDLARIFFTELSKRNNNPIYNLMPDLVSRLSKRDR-----------VDTPAFRRIMTFLMNFVTSDKHSASLVEKLCSRFSSCDE-------------------------------------------------------------------------------VTHAQDMAYCLAQLRMNDKVLHRLDALFRTYKDQLFDEDVYQSFKQLALKAKKLPKQEDKELAAE 420          
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: B5Y4W4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y4W4_PHATC)

HSP 1 Score: 293 bits (750), Expect = 6.260e-80
Identity = 172/388 (44.33%), Postives = 228/388 (58.76%), Query Frame = 3
Query:   48 WFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVC-PLALSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAGGRGDDREGDAAEEDEMNAAAEVEAEDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFATLERAP--EPAVRANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTP---EKFRAIMTFLLGFVEKDKHAEGLAEKLCVRI 1193
            WF AAEQ I A+F + P PE AC  ++  + + T     +  A  C PL L+R   V G +AL++LVYTE L   ++   A  +                           + A +  G+K     GDD       E E+  AAEVEAE+ER+  ++ E+EI+GR L+    PL+ R+V ++ G +   +L +S  LALCKFM VS +FCE+HL LLF  L  AP  +  +RAN VVALGDLAFRFPN VEPY PR+Y  LRD S  VR + LMVLTHL+LNDM+KVKG V EIA C+ DD+PRI+ M++L F ELSKR N+PIYN +PDI+  L               S+ P   E FR IM+FLLG+++K++  E L EKLC+R 
Sbjct:  787 WFSAAEQTIKALFVICPEPEKACSDIILGMHETT-----FRGADQCHPLRLARFFHVLGQIALELLVYTESLSGSVRRANARKS-----------------------LKKQEQADQAKGKKIGSNSGDDDI-----EAELGMAAEVEAENERKLADISENEILGRGLVSVFAPLLVRVVGNDGGKFQSEVLMQSCTLALCKFMCVSSSFCEKHLSLLFKALANAPAEDTIMRANTVVALGDLAFRFPNEVEPYTPRLYACLRDSSTKVRRHTLMVLTHLILNDMVKVKGQVCEIALCLRDDDPRIRDMSRLLFHELSKRSNNPIYNLLPDIISQL---------------SLLPNRKEDFRGIMSFLLGYIKKERQNEMLTEKLCLRF 1126          
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: A0A7S4AWZ3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AWZ3_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.520e-78
Identity = 169/385 (43.90%), Postives = 225/385 (58.44%), Query Frame = 3
Query:   48 WFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVC-PLALSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAGGRGDDREGDAAEEDEMNAAAEVEAEDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFATLERAPEPAV--RANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRI 1193
            WF  AEQ IGA+F +SP PE +C  ++R +  +TL     +    C PL L+R   V GH+A+K+LVYTE L   ++   A  +                           + A K    + +   G D + +A    E+   AE+EAE+ER+  E+ E EIVGR LL   GPL+ R+V +E   +   +LR+++ LALCKFM VS +FCE HL ++F  L  AP+  V  RAN V+ALGDLAFRFPN VEPY PR+Y  LRD S  VR + LMVLTHL+LNDMIKVKG V EIA C+ D + RI+  ++L F ELSKR N+P+YN +PDI+  LS      D             FR+I++FLLG+++KDK  E L EKLC R 
Sbjct:  848 WFSTAEQVIGALFVVSPAPEVSCAEIIRGMHHQTL--GGSSRVEECHPLRLARFFHVLGHIAMKLLVYTEALSGSVRRANAKKS-----------------------LKKQEEADKAKQRRSSESNGPDEDIEA----ELGMEAELEAENERQVAEIAEKEIVGRGLLSIFGPLLVRVVGNEGNKFNSEILRQTSTLALCKFMCVSSSFCEEHLPVIFTGLANAPKDDVTLRANTVIALGDLAFRFPNEVEPYTPRIYSCLRDDSTKVRRHTLMVLTHLILNDMIKVKGQVCEIALCLRDPDQRIRDTSRLLFHELSKRSNNPVYNLLPDIISQLSLIELVKD------------DFRSILSFLLGYIKKDKQNEMLIEKLCQRF 1191          
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: A0A6G0XYQ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYQ8_9STRA)

HSP 1 Score: 288 bits (738), Expect = 2.830e-78
Identity = 165/392 (42.09%), Postives = 232/392 (59.18%), Query Frame = 3
Query:   30 DESMHHWFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAA---AGVCPLA-LSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAGGRGDDREGDAAEEDEMNAAAEVEAEDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFATLERAPEPAVRANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRI 1193
            DE+   WF AA+QAI A+F +   PE  C  ++      T L P         VC  + LS+  F+ GHVA++M VY E L   +K                                  +A  K+  +K       D E  ++ E+E+   AE+EAE++     + +HE+VGRNLLGA GP++ RLVA+E G++   L++E++ +ALCKFM +SG FC+++L L+F  L+   +P+VR+NIVVALGDL+FRFPN VEP+   +Y RLRD    VR N +MVLTHL+LNDM+KVKG +SEIA  + D++ RI  +A+LFF ELSKRGN+PIYN +PD +G L           S+  +++ + F+ I  FLLGF++KDK AE L EKLC R 
Sbjct:  755 DETNLEWFDAAQQAIEALFHVCQYPEQPCGDIIA--AWSTALFPTDEEDQEEAVCSASELSKFVFILGHVAIRMAVYVESLASSVK----------------------------------EARHKSQKDKN------DVEKPSSMEEELGMNAEIEAEEDEFLHSLTQHELVGRNLLGAYGPILIRLVANEEGIFDDDLIKEASTVALCKFMCISGDFCDKNLPLIFTKLKECQQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDIDVNVRKNTIMVLTHLILNDMVKVKGQISEIALSLVDEDKRICDLAKLFFHELSKRGNNPIYNMLPDTIGRL-----------STSSNLSKKSFQEITKFLLGFIQKDKQAESLVEKLCQRF 1093          
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: A0A7S1BZ39_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZ39_9STRA)

HSP 1 Score: 287 bits (735), Expect = 7.100e-78
Identity = 171/393 (43.51%), Postives = 229/393 (58.27%), Query Frame = 3
Query:   30 DESMHHWFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVCPLALSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAGGRGDDREGDAAE---EDEMNAAAEVEAEDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFATLERAP--EPAVRANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRI 1193
            DE    WF AAEQAI AIF +   PE A   ++  +   TL       +    + LSR  FV GH+A+K+LVY+E L   +++                                 +AA   A ++KA     ++ G+ +E   EDE+  +AE EA+ E +  E+ E EIVGR+ LGA GPL+ R++++  G +   LL+++  LALCKFM VS +FCE+HL LL   L +AP  +  +RAN +VALGDLAFRFPNA EPY PR+Y  LRD S  VR + LMVLTHL+LNDM+KVKG V EIA C+ D+E RI+ M++L F ELSKR ++PIYN +PDI+  LS+     D             FR IM+FLL F+EKDK  E L EK+C R 
Sbjct:  837 DECTLSWFSAAEQAIDAIFTVCHEPEKASAEIIVGMESNTLGNRTTCNS----IRLSRFFFVVGHIAMKLLVYSEALSSSVQI--------------------------------GNAAKNLAKQQKARKEKKNKSGNKSESNLEDELGVSAEAEADTELKVAEIAEKEIVGRSFLGAFGPLIVRVISNNDGSFSSSLLQQTTTLALCKFMCVSNSFCEKHLPLLCTALVKAPAEDTTLRANTIVALGDLAFRFPNAFEPYTPRIYACLRDKSIKVRRHTLMVLTHLILNDMVKVKGQVCEIAMCLEDEESRIRDMSRLLFNELSKRSHNPIYNLLPDIMSKLSKMELRND------------SFRRIMSFLLKFIEKDKQNEMLVEKICQRF 1181          
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Match: A0A067CDW8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDW8_SAPPC)

HSP 1 Score: 285 bits (730), Expect = 2.180e-77
Identity = 161/390 (41.28%), Postives = 226/390 (57.95%), Query Frame = 3
Query:   30 DESMHHWFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVCPLA--LSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAXXXXXXXXXXXXXXXXXXXDAASKTAGEKKAGGRGDDREGDAAEEDEMNAAAEVEAEDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLALCKFMSVSGAFCERHLDLLFATLERAPEPAVRANIVVALGDLAFRFPNAVEPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCDDEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGGSVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRI 1193
            +++   WF AA+QAI A+F +   PE  C  V+         + +    G    A  L++  F+ GH+A++M VY E +   +K  R+                                   +A E +            + E+E+   AE+EA DE    E+ +HEIVG NLLGA GP++ RLVA+E G +   +++E+A +ALCKFM +S  FCE++L L+F  L+ + +P+VR NIVVALGDL+FRFPN VEP+   +Y RLRD    VR N +MVLTHL+LNDM+KVKG +SEIA C+ DDE RI+ +A+LFF ELSKRGN+PIYN +PD +G LS    T+D        ++ E FR I  FL+GF++KDK  E L +K+C R 
Sbjct:  763 EDTNADWFDAAQQAIEALFHVCQYPEEPCGDVIATWSAMIFPKTDEDMEGAACTATELAKFVFLLGHIAIRMAVYVESVASSVKEARSKI-------------------------------KPSADEPQQ-----------SMEEELGMTAEIEAHDEEMLQELTQHEIVGTNLLGAYGPILVRLVANEDGCFDDEMIKETATVALCKFMCISSDFCEKNLPLVFTKLKESEQPSVRCNIVVALGDLSFRFPNLVEPWTSHIYARLRDIDTNVRKNTIMVLTHLILNDMVKVKGQISEIALCLVDDEARIKDLAKLFFHELSKRGNNPIYNMLPDTIGRLS----TSD--------LSKESFREITKFLIGFIQKDKQNESLVDKMCQRF 1098          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig83.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM34_ECTSI4.100e-9651.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLB4_9STRA3.710e-8744.33Non-SMC mitotic condensation complex subunit 1-dom... [more]
A0A7S4MY57_9STRA8.890e-8446.84Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2A7H4_TRICV5.670e-8345.74Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2DPP1_9STRA1.000e-8235.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B5Y4W4_PHATC6.260e-8044.33Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4AWZ3_9STRA1.520e-7843.90Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A6G0XYQ8_9STRA2.830e-7842.09Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S1BZ39_9STRA7.100e-7843.51Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A067CDW8_SAPPC2.180e-7741.28Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig83contigP-wetherbeei_contig83:4518..8525 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LM34
Preferred nameNCAPD2
PFAMsCnd1,Cnd1_N,Cohesin_HEAT
Model size2795
Max annot lvl2759|Eukaryota
KEGG koko:K06677
KEGG Pathwayko04111,map04111
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000785,GO:0000793,GO:0000794,GO:0000796,GO:0000797,GO:0000799,GO:0000819,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006342,GO:0006355,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007076,GO:0007127,GO:0007129,GO:0007130,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010032,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010948,GO:0016043,GO:0016458,GO:0019219,GO:0019222,GO:0022402,GO:0022414,GO:0022607,GO:0030261,GO:0030466,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0035327,GO:0040029,GO:0042393,GO:0043007,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043570,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0045120,GO:0045132,GO:0045143,GO:0045786,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051445,GO:0051447,GO:0051726,GO:0060255,GO:0061982,GO:0065007,GO:0070013,GO:0070058,GO:0070192,GO:0070193,GO:0071103,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0098687,GO:0098813,GO:0140013,GO:0140014,GO:1901360,GO:1902679,GO:1903046,GO:1903047,GO:1903341,GO:1903342,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2001141
Exons5
Evalue1.46e-105
EggNOG OGsCOG5098@1|root,KOG0414@2759|Eukaryota
Descriptionmitotic chromosome condensation
Cds size2388
COG categoryD
BRITEko00000,ko00001,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig83.5.1prot_P-wetherbeei_contig83.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig83 4887..8487 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187032.0332634-UTR-P-wetherbeei_contig83:4517..48861683187032.0332634-UTR-P-wetherbeei_contig83:4517..4886Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig83 4518..4886 -
1683187032.0979502-UTR-P-wetherbeei_contig83:8487..85251683187032.0979502-UTR-P-wetherbeei_contig83:8487..8525Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig83 8488..8525 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187032.0461717-CDS-P-wetherbeei_contig83:4886..57081683187032.0461717-CDS-P-wetherbeei_contig83:4886..5708Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig83 4887..5708 -
1683187032.0581954-CDS-P-wetherbeei_contig83:5998..64871683187032.0581954-CDS-P-wetherbeei_contig83:5998..6487Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig83 5999..6487 -
1683187032.067436-CDS-P-wetherbeei_contig83:6743..69021683187032.067436-CDS-P-wetherbeei_contig83:6743..6902Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig83 6744..6902 -
1683187032.0764117-CDS-P-wetherbeei_contig83:7255..81431683187032.0764117-CDS-P-wetherbeei_contig83:7255..8143Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig83 7256..8143 -
1683187032.0867224-CDS-P-wetherbeei_contig83:8457..84871683187032.0867224-CDS-P-wetherbeei_contig83:8457..8487Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig83 8458..8487 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig83.5.1

>prot_P-wetherbeei_contig83.5.1 ID=prot_P-wetherbeei_contig83.5.1|Name=mRNA_P-wetherbeei_contig83.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=796bp
MHHWFGAAEQAIGAIFRLSPRPEAACCTVVRQLVQETLLRPNYAAAGVCP
LALSRLCFVAGHVALKMLVYTEQLERRMKLTRAAAANAGGGSTAAANAGG
GSTAANNQGGDGTDAASKTAGEKKAGGRGDDREGDAAEEDEMNAAAEVEA
EDERRFGEVIEHEIVGRNLLGALGPLVARLVADERGVYGHPLLRESAVLA
LCKFMSVSGAFCERHLDLLFATLERAPEPAVRANIVVALGDLAFRFPNAV
EPYNPRMYGRLRDGSAAVRANALMVLTHLVLNDMIKVKGHVSEIARCVCD
DEPRIQGMAQLFFRELSKRGNSPIYNFIPDIVGHLSRGNTTADGSGSSGG
SVTPEKFRAIMTFLLGFVEKDKHAEGLAEKLCVRIKAAEEGGSGTGGGGG
GKDESGSAVEDGSGKDAGAGEDSGEGGSATRNSGGSATQSGGGASQSSGE
GGLFGSFKDGSPGGGGAGYEQQQRDMAYCLTQLKLTDKLLKTLVALLPSY
KAALRDDDVHKSFAGIAARAKKSTKAELKELGEELEKQVEIHHQGEAEEA
GTSRRAQQAAAIAGKRAGAAKAAAAATPRRPPCASTTASTRKTGGKADGP
KASSIGAGGGGRKEVALGAGDNDDDSNADEDAAMSPPPPCAAKSGGRGGA
EATVKRGVLTAAKARANNNGSSGGTAAKKATGTSRAPRAAAASGGRKPAA
GTSRGGGVHSNYFDGSSSDKEEEESGGGSAEAGSADERSTADSDDSSSSS
DSEKENGGCNAGRGKKKGKKAAAGTDRASAAVAACRGPRGVAIEG*
back to top

mRNA from alignment at P-wetherbeei_contig83:4518..8525-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig83.5.1 ID=mRNA_P-wetherbeei_contig83.5.1|Name=mRNA_P-wetherbeei_contig83.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4008bp|location=Sequence derived from alignment at P-wetherbeei_contig83:4518..8525- (Phaeothamnion wetherbeei SAG_119_79)
GGTGTCTGCCGCCGGGTGCCGAGGGCGGCGACGAGAGCATGCACCACTGG TTCGGCGCCGCCGAACAGGTGGGGGAGAGGGAAGCGGGATTGGTTGAGCC GTTTGGTTCTCCCTCGCTTCGTTGGGTTGGTAGGAGAGGGGACTGAAAAT TAGATATCCGCTCGCGAGACCAATCTTGGCAGTGCTGACATGTGGCGCGA TTGGACTGAATTATGGGTCGTGAACCCAGCAGCCGTTGCAGAACGAAGCG AGAATGCAGCTCGGCATCTGGATGCGGTCAGGCTGTGACTTCCCTTCTTG TTTCCTGGTCGTTTTCTGCTGCTGCTTGTCGGCCTCCTGTTGACCTCTGA CCTCGTGCCTCTTCCAACCAACTATACTGCAGGCCATCGGCGCCATCTTC CGACTGAGCCCGCGCCCCGAGGCGGCCTGCTGCACCGTCGTCCGCCAGCT CGTCCAGGAGACGCTGCTGCGCCCAAACTATGCTGCTGCCGGCGTCTGCC CGCTGGCACTGAGCCGGCTTTGCTTCGTCGCGGGCCACGTCGCCCTCAAG ATGCTCGTCTACACGGAGCAGCTGGAACGCCGCATGAAGCTCACCCGCGC CGCCGCCGCGAATGCCGGCGGCGGCAGCACCGCCGCCGCGAACGCCGGCG GCGGCAGCACCGCTGCAAACAACCAAGGCGGCGATGGCACTGATGCTGCG TCGAAGACGGCCGGCGAGAAGAAGGCGGGCGGCCGGGGGGACGACAGAGA GGGCGACGCGGCTGAGGAGGACGAGATGAACGCAGCGGCGGAGGTGGAAG CTGAGGACGAGCGGCGCTTTGGCGAGGTGATTGAGCACGAAATCGTTGGC CGCAACCTGCTGGGAGCGCTCGGTCCCCTGGTGGCGCGGCTGGTGGCGGA CGAGCGCGGCGTCTACGGCCACCCGCTGCTGCGAGAAAGCGCCGTGCTGG CGCTATGCAAGTTCATGAGCGTGTCAGGCGCATTCTGCGAGCGGCACCTT GACCTGCTTTTCGCCACGCTCGAGAGGGCGCCCGAGCCAGCGGTACGCGC CAACATCGTGGTGGCGCTGGGCGACTTGGCGTTCCGCTTTCCGAACGCTG TGGAGCCCTACAATCCGCGGATGTATGGGCGGCTCCGGGACGGGTCGGCG GCGGTGCGGGCCAACGCGCTCATGGTGCTGACGCACCTGGTGCTGAACGA CATGATCAAGGTGAAGGGGCACGTCAGCGAGATCGCGCGCTGCGTCTGCG ACGACGAGCCCCGCATCCAGGTAACATCATGAGCCAGGCGGTCGGCCTGA TGGCGGTCGAGTCTGGCGGTTGAGTCTGATGGCGGCGGCTGCGGTTATTG TTGTCCTTTTGCGGTGCCGGCAGTTGTTGCCCTTCTGCGGTACCGGCGGC GGTTGTCCCTTGGCTGTCCCGGGGGCGGTGGCGGCAGTAGCGCTTCGCTG CTGCCTGATGGCGCGGTTGAGCCCGTTCTGCCTCCATATTTCTCCTCTTT GTCTTCATTGCTTCAGTTGCGTCATGCGGACGTGCGCCTTCCTTGCCTGG CCAGCTGGTCGCTGTTGATCCGCAGTTTCTCCTGGCGTTCCGATCCTGTC CCTATTTGCTTCCCTCCTCCCAGGGCATGGCTCAGCTCTTCTTCCGGGAG CTGAGCAAGCGCGGCAACAGCCCCATCTACAACTTCATCCCCGACATCGT CGGACACCTCTCGCGGGGCAACACTACGGCCGACGGCTCTGGCAGCAGTG GCGGCAGCGTTACCCCGGAGAAATTCCGCGCCGTGAGTTTTGGGAGGCGG TTGCATAGGGTTTTCTGCTCTTGAGTTCGCTTTCTTGTTGCCGCTTCCTC TTAGTCTAAGAATAGATTTATTGGAGCACTTACTGTATCCAAGTCAGCGA GTTTCGGTAGGCGCTGGTTGTTTCTCTGAAATGTGGCGGCCAACAGCTCG TTTCTGATTACCGACCGGAAGGTGAAATCTATCTGCCGTGTCCACCTTGC CGTGAACATGCTGGGAACACTGCTGGGCCTGCGTGCAGATTATGACGTTC CTGCTGGGCTTCGTGGAGAAGGACAAGCACGCCGAGGGGCTCGCTGAAAA GCTCTGCGTCCGCATCAAGGCCGCTGAGGAAGGCGGCAGCGGCACTGGCG GCGGCGGAGGCGGCAAGGATGAAAGCGGCAGCGCTGTTGAGGACGGCAGC GGCAAGGACGCCGGTGCCGGCGAGGACAGCGGCGAGGGCGGCAGCGCGAC GAGGAACAGCGGCGGCAGCGCCACCCAGAGCGGCGGCGGGGCTAGTCAGA GCAGTGGCGAGGGCGGCCTGTTCGGCAGCTTCAAGGATGGCAGTCCCGGC GGCGGCGGGGCGGGGTACGAGCAGCAGCAGCGGGACATGGCGTACTGCCT GACACAGCTGAAGCTGACGGACAAGCTGCTCAAGACGCTCGTGGCGCTGC TGCCGTCCTACAAGGCGGCGCTGCGGGACGACGACGTCCACAAGAGCTTC GCGGGCATCGCCGCCCGCGCCAAGAAGGCGCGACGGGAAGGATTGCGGGG TCTCTTTGGTGGCGGGCAGCACGATGTTTCCTTTGCGTATTAGATGGAAT AGCTCCAAAGAGACTGCGTTTCTTCCTTCACATCTGCATTTCCATCTCAG TGGCGTAATTGTTGGTATCGCACGCCACTTTGGCCTTGTTTGCATTGCTG CCAGCTGTAAGACGTTCGCTGTTTCAATTCATTCCCCTGTGCTGACTGAC ATTTCTGCTTCTCCCTTTTCGAAAACCGTTGAGCAAAACGAATCCAAATC TCTGGGTTGAATCGCAGTCGACCAAGGCGGAGCTGAAGGAGCTCGGCGAG GAGCTCGAAAAGCAGGTCGAGATCCACCACCAGGGCGAAGCCGAGGAAGC TGGCACTTCCCGCCGCGCCCAGCAGGCCGCCGCCATCGCTGGCAAGCGCG CCGGCGCCGCAAAGGCGGCAGCAGCGGCGACGCCGCGCCGCCCGCCGTGC GCGTCGACGACGGCAAGCACGCGGAAGACGGGGGGCAAGGCCGACGGTCC CAAAGCCTCTTCCATCGGTGCCGGCGGCGGTGGCCGTAAGGAGGTGGCAT TGGGAGCCGGTGACAACGACGACGACTCCAACGCGGACGAAGATGCGGCG ATGTCGCCGCCTCCACCGTGTGCGGCGAAATCTGGCGGCAGGGGCGGCGC GGAGGCGACGGTTAAGCGGGGTGTCCTAACGGCGGCTAAAGCCCGAGCGA ACAACAACGGCAGCAGCGGCGGCACCGCCGCCAAGAAAGCCACGGGCACA AGCCGTGCCCCGCGCGCTGCTGCCGCCAGCGGCGGCCGCAAGCCGGCCGC TGGCACGAGCCGTGGCGGCGGCGTCCACAGCAACTACTTTGACGGATCGT CGTCGGACAAAGAAGAGGAGGAGAGCGGCGGCGGCTCGGCAGAGGCGGGG AGCGCCGACGAACGCAGCACCGCCGACAGCGACGACAGCAGCAGCAGCAG TGATTCGGAGAAGGAGAACGGGGGCTGCAACGCTGGGCGGGGCAAGAAGA AAGGCAAGAAAGCAGCGGCGGGCACCGACCGTGCATCCGCGGCGGTGGCG GCGTGCCGCGGGCCCCGAGGCGTGGCGATTGAGGGGTAGCTGGCCGGTTA TTCAGCGGTGTGGCACTCGCTCTTTTTGCGGGGTAGCTGGCCAGCTGTGT GGCCGTATAGCGCTTGCTCTTTTAGGTAGTCGACCATGTTTCCGGCTGCT AGAAGGAAAATGACCGCACAGTGTATTAGGGGGCAGTGGGGAACGATGAA CGATGCTCCGCTTTGATGTACAGGGAGGGACTCGAAATTTTAAGGTGCTA GGTTTTATATGCATGCGCGCACATTGCGCAACGGTGGAGCGGCAGGAAAT GGGCGGCATCCAAGCGAGGCCGGATAAGCAGGGACATCTATGTCGTGGGA AAAGAATTCAGCAACGGCCTTTGCATATTGACACGGTTAATGTATTTCCT CTCCCTCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig83:4518..8525-

>mRNA_P-wetherbeei_contig83.5.1 ID=mRNA_P-wetherbeei_contig83.5.1|Name=mRNA_P-wetherbeei_contig83.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2388bp|location=Sequence derived from alignment at P-wetherbeei_contig83:4518..8525- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACCACTGGTTCGGCGCCGCCGAACAGGCCATCGGCGCCATCTTCCG
ACTGAGCCCGCGCCCCGAGGCGGCCTGCTGCACCGTCGTCCGCCAGCTCG
TCCAGGAGACGCTGCTGCGCCCAAACTATGCTGCTGCCGGCGTCTGCCCG
CTGGCACTGAGCCGGCTTTGCTTCGTCGCGGGCCACGTCGCCCTCAAGAT
GCTCGTCTACACGGAGCAGCTGGAACGCCGCATGAAGCTCACCCGCGCCG
CCGCCGCGAATGCCGGCGGCGGCAGCACCGCCGCCGCGAACGCCGGCGGC
GGCAGCACCGCTGCAAACAACCAAGGCGGCGATGGCACTGATGCTGCGTC
GAAGACGGCCGGCGAGAAGAAGGCGGGCGGCCGGGGGGACGACAGAGAGG
GCGACGCGGCTGAGGAGGACGAGATGAACGCAGCGGCGGAGGTGGAAGCT
GAGGACGAGCGGCGCTTTGGCGAGGTGATTGAGCACGAAATCGTTGGCCG
CAACCTGCTGGGAGCGCTCGGTCCCCTGGTGGCGCGGCTGGTGGCGGACG
AGCGCGGCGTCTACGGCCACCCGCTGCTGCGAGAAAGCGCCGTGCTGGCG
CTATGCAAGTTCATGAGCGTGTCAGGCGCATTCTGCGAGCGGCACCTTGA
CCTGCTTTTCGCCACGCTCGAGAGGGCGCCCGAGCCAGCGGTACGCGCCA
ACATCGTGGTGGCGCTGGGCGACTTGGCGTTCCGCTTTCCGAACGCTGTG
GAGCCCTACAATCCGCGGATGTATGGGCGGCTCCGGGACGGGTCGGCGGC
GGTGCGGGCCAACGCGCTCATGGTGCTGACGCACCTGGTGCTGAACGACA
TGATCAAGGTGAAGGGGCACGTCAGCGAGATCGCGCGCTGCGTCTGCGAC
GACGAGCCCCGCATCCAGGGCATGGCTCAGCTCTTCTTCCGGGAGCTGAG
CAAGCGCGGCAACAGCCCCATCTACAACTTCATCCCCGACATCGTCGGAC
ACCTCTCGCGGGGCAACACTACGGCCGACGGCTCTGGCAGCAGTGGCGGC
AGCGTTACCCCGGAGAAATTCCGCGCCATTATGACGTTCCTGCTGGGCTT
CGTGGAGAAGGACAAGCACGCCGAGGGGCTCGCTGAAAAGCTCTGCGTCC
GCATCAAGGCCGCTGAGGAAGGCGGCAGCGGCACTGGCGGCGGCGGAGGC
GGCAAGGATGAAAGCGGCAGCGCTGTTGAGGACGGCAGCGGCAAGGACGC
CGGTGCCGGCGAGGACAGCGGCGAGGGCGGCAGCGCGACGAGGAACAGCG
GCGGCAGCGCCACCCAGAGCGGCGGCGGGGCTAGTCAGAGCAGTGGCGAG
GGCGGCCTGTTCGGCAGCTTCAAGGATGGCAGTCCCGGCGGCGGCGGGGC
GGGGTACGAGCAGCAGCAGCGGGACATGGCGTACTGCCTGACACAGCTGA
AGCTGACGGACAAGCTGCTCAAGACGCTCGTGGCGCTGCTGCCGTCCTAC
AAGGCGGCGCTGCGGGACGACGACGTCCACAAGAGCTTCGCGGGCATCGC
CGCCCGCGCCAAGAAGTCGACCAAGGCGGAGCTGAAGGAGCTCGGCGAGG
AGCTCGAAAAGCAGGTCGAGATCCACCACCAGGGCGAAGCCGAGGAAGCT
GGCACTTCCCGCCGCGCCCAGCAGGCCGCCGCCATCGCTGGCAAGCGCGC
CGGCGCCGCAAAGGCGGCAGCAGCGGCGACGCCGCGCCGCCCGCCGTGCG
CGTCGACGACGGCAAGCACGCGGAAGACGGGGGGCAAGGCCGACGGTCCC
AAAGCCTCTTCCATCGGTGCCGGCGGCGGTGGCCGTAAGGAGGTGGCATT
GGGAGCCGGTGACAACGACGACGACTCCAACGCGGACGAAGATGCGGCGA
TGTCGCCGCCTCCACCGTGTGCGGCGAAATCTGGCGGCAGGGGCGGCGCG
GAGGCGACGGTTAAGCGGGGTGTCCTAACGGCGGCTAAAGCCCGAGCGAA
CAACAACGGCAGCAGCGGCGGCACCGCCGCCAAGAAAGCCACGGGCACAA
GCCGTGCCCCGCGCGCTGCTGCCGCCAGCGGCGGCCGCAAGCCGGCCGCT
GGCACGAGCCGTGGCGGCGGCGTCCACAGCAACTACTTTGACGGATCGTC
GTCGGACAAAGAAGAGGAGGAGAGCGGCGGCGGCTCGGCAGAGGCGGGGA
GCGCCGACGAACGCAGCACCGCCGACAGCGACGACAGCAGCAGCAGCAGT
GATTCGGAGAAGGAGAACGGGGGCTGCAACGCTGGGCGGGGCAAGAAGAA
AGGCAAGAAAGCAGCGGCGGGCACCGACCGTGCATCCGCGGCGGTGGCGG
CGTGCCGCGGGCCCCGAGGCGTGGCGATTGAGGGGTAG
back to top