mRNA_P-wetherbeei_contig8265.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8265.2.1
Unique NamemRNA_P-wetherbeei_contig8265.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A539E3U1_9ACTN (Histone deacetylase superfamily protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E3U1_9ACTN)

HSP 1 Score: 372 bits (956), Expect = 5.880e-127
Identity = 178/246 (72.36%), Postives = 197/246 (80.08%), Query Frame = 1
Query:   13 MSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRG 750
            M VVYT  HL H P  E+  S  H+PFEH GRAE I+  L  D  F+F  P   G  PI AVHD GL+RFLG AWAE+QL    TR+V PDVF+R  +RNKMS+  EP SINGRLGWWCFETTT LTEGT+ AA  AVDTALT TQ+VLDG   AYGLCRPPGHHA++++YGGYCFFNNAAIAAH +ASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPF IG+ADETG+GRG
Sbjct:    1 MKVVYTPAHLLHDPHSEIHTSGTHSPFEHIGRAETIKETLAADGSFSFTAPTEWGTEPIAAVHDPGLLRFLGTAWAEYQLYMPATREVVPDVFFRNPLRNKMSELGEPESINGRLGWWCFETTTPLTEGTYTAARGAVDTALTTTQIVLDGDRWAYGLCRPPGHHAATSLYGGYCFFNNAAIAAHHVASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFTIGYADETGTGRG 246          
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A7X9KHM5_9ACTN (Histone deacetylase family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KHM5_9ACTN)

HSP 1 Score: 369 bits (946), Expect = 1.110e-126
Identity = 174/246 (70.73%), Postives = 199/246 (80.89%), Query Frame = 1
Query:   13 MSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRG 750
            M VVYT  HL H P VE E S++H+PFEH GRAE IR  L+ D+RF F  P   G APIEAVH+ GLV FL E WA ++  +   R+V PDVFYRPA+R+KMS GREP +INGR+G+WCFETTT LTE T+ AA  AVDTALT  QLVLDG  SAYGLCRPPGHHA++ +YGGYCFFNNAA+AAH +A+TTG KVT+LDVDYHHGNGTQ+IFYDRDDVQYVSLHGDPARAYP  IGFADETG+GRG
Sbjct:    1 MKVVYTPAHLLHDPHVEFETSQVHSPFEHIGRAEAIRETLQADSRFQFLTPGEWGTAPIEAVHNPGLVTFLAEGWALYEAQHPGVREVVPDVFYRPALRDKMSQGREPQAINGRVGYWCFETTTPLTETTYQAARGAVDTALTTAQLVLDGESSAYGLCRPPGHHATADLYGGYCFFNNAAVAAHHVAATTGAKVTILDVDYHHGNGTQQIFYDRDDVQYVSLHGDPARAYPSSIGFADETGTGRG 246          
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A6I3WW05_9ACTN (Histone deacetylase family protein n=2 Tax=root TaxID=1 RepID=A0A6I3WW05_9ACTN)

HSP 1 Score: 364 bits (935), Expect = 8.230e-124
Identity = 169/245 (68.98%), Postives = 197/245 (80.41%), Query Frame = 1
Query:   13 MSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGR 747
            M VVYT  HL+H P   +E SR+ +P+EH GR E I   L  D RF    P   G +PI AVHD GL+RFL  AWAE+Q+A G T DV PDVFYRPA+R+ M++GREP S+NGRLGWWCFETTT LT GT+ AA +AVDTAL+ATQLVL G  SAYGLCRPPGHHA++T+YGGYC+FNNAAIAA+ +A+TTGTKVTVLDVDYHHGNGTQEIFY RDDVQYVSLHGDP  AYP+ +G+ADETG+GR
Sbjct:    1 MKVVYTPLHLQHDPQTGIEQSRLMSPWEHVGRGEAIHATLRDDTRFQLVAPTEWGTSPIAAVHDPGLLRFLSTAWAEYQVAAGPTADVVPDVFYRPALRHGMTEGREPVSVNGRLGWWCFETTTPLTNGTYTAALAAVDTALSATQLVLGGERSAYGLCRPPGHHATTTLYGGYCYFNNAAIAANHVAATTGTKVTVLDVDYHHGNGTQEIFYSRDDVQYVSLHGDPTNAYPYTVGYADETGAGR 245          
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A0R2PYW9_9ACTN (Hist_deacetyl domain-containing protein n=1 Tax=Acidimicrobium sp. BACL19 MAG-120924-bin39 TaxID=1655566 RepID=A0A0R2PYW9_9ACTN)

HSP 1 Score: 363 bits (932), Expect = 3.290e-123
Identity = 172/249 (69.08%), Postives = 194/249 (77.91%), Query Frame = 1
Query:    4 AAPMSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRG 750
            A  M VVY+  HL H P  E+E+S  H+PFEHTGRAE I+  L  D +FAFR P  HG+ PI AVHD GLV+FL EAWAE+Q   G  R+V PD+FYR  +RN+M D  EP S+  RLGWWCFETTT LTEGT+ AA +AVDTALTAT +VL G  +AYGLCRPPGHHA+  +YGGYCFFNNAAIAAH I + TG KVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDP RAYP+  G ADETGSGRG
Sbjct:    4 AGEMQVVYSPQHLLHDPATEIESSTSHSPFEHTGRAETIKASLLADPQFAFRAPSDHGVEPITAVHDAGLVKFLSEAWAEYQQVVGPRREVVPDLFYRHELRNEMGDSEEPESVVARLGWWCFETTTPLTEGTYAAARAAVDTALTATDVVLGGERAAYGLCRPPGHHATRDLYGGYCFFNNAAIAAHEIVARTGGKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPRRAYPYFTGHADETGSGRG 252          
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A094PBA7_9ACTN (Hist_deacetyl domain-containing protein n=6 Tax=root TaxID=1 RepID=A0A094PBA7_9ACTN)

HSP 1 Score: 360 bits (923), Expect = 5.470e-122
Identity = 171/246 (69.51%), Postives = 195/246 (79.27%), Query Frame = 1
Query:   13 MSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRG 750
            M VVYT  HL H P  E+E   +H+PFEH GR E IR VL  D+RF F+ P + G  PI AVHD+GL RFL  AW E+Q A G  R+V P+VFY  A+RNKMS G EP+SI+GRLGWWCFETTT LTEGT+ AA  AVDTA+TA QLVLDG  SAYGLCRPPGHHA++++YGGYCFFNNAAI AH +AST G KV VLDVDYHHGNGTQEIFYDRDDV YVSLHGDPARAYP+ IG+ADE G+G+G
Sbjct:    1 MKVVYTPAHLLHDPHTEIEKGTVHSPFEHIGRGEIIREVLSADSRFDFQLPTQWGTDPINAVHDSGLERFLTTAWQEYQDAIGPCREVTPEVFYSQALRNKMSLGTEPASISGRLGWWCFETTTPLTEGTYEAARGAVDTAMTAMQLVLDGEKSAYGLCRPPGHHATTSLYGGYCFFNNAAIVAHHVASTRGVKVVVLDVDYHHGNGTQEIFYDRDDVMYVSLHGDPARAYPYTIGYADEVGAGKG 246          
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A6I2VWJ8_9ACTN (Histone deacetylase family protein n=3 Tax=root TaxID=1 RepID=A0A6I2VWJ8_9ACTN)

HSP 1 Score: 357 bits (916), Expect = 6.330e-121
Identity = 168/246 (68.29%), Postives = 192/246 (78.05%), Query Frame = 1
Query:   13 MSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRG 750
            M VVYT  HL H P  E+E   +H+PFEH GR E IR VL  D+RF    P   G+  I AVH+ GL RF   AW E+Q   G TR+V P+VFYRP++R+KM+DG EP SI GRLGWWCFETTT LTEGT+ AA  AVDTA+TA QLVLDG  +AYGLCRPPGHHA++ +YGGYCFFNNAAI AH +ASTTG KV VLDVDYHHGNGTQEIFYDRDDV YVSLHGDP+RAYP+ IG+ADETG+GRG
Sbjct:    1 MKVVYTPAHLLHDPHSEIEKGTVHSPFEHIGRGEVIREVLSADSRFEMMSPSEWGIDVINAVHNPGLHRFFTTAWQEYQDIIGPTREVTPEVFYRPSLRHKMADGVEPVSITGRLGWWCFETTTPLTEGTYAAARGAVDTAMTAMQLVLDGERAAYGLCRPPGHHATTDLYGGYCFFNNAAIVAHHVASTTGVKVAVLDVDYHHGNGTQEIFYDRDDVMYVSLHGDPSRAYPYTIGYADETGTGRG 246          
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A4P5S0L1_9ACTN (Acetylpolyamine amidohydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5S0L1_9ACTN)

HSP 1 Score: 354 bits (908), Expect = 1.040e-119
Identity = 169/247 (68.42%), Postives = 194/247 (78.54%), Query Frame = 1
Query:   13 MSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRGA 753
            M VVYT  HL H+P VE+E S  H+PFE+  RAEKIR VL  D  F F  P + G API AVHD GL+RFL  AW+++Q   G   +V PD+FYRPA R  MS G+EP S+ G+LGWWCFETTT LT GT+ AA  AVDTALTATQLVL G   +YGLCRPPGHHA+S++YGGYCFFNNAAIAAH IA+TTGTKV VLDVDYHHGNGTQEIFYDR+DV YVSLHGDP RAYP+ +G ADETG+G+GA
Sbjct:    1 MKVVYTPAHLLHNPSVEIEKSTTHSPFENISRAEKIREVLSADTAFDFISPTQWGTAPINAVHDPGLLRFLTTAWSDYQRDVGAAPEVVPDMFYRPAQRRGMSQGQEPDSVTGKLGWWCFETTTPLTSGTYEAARGAVDTALTATQLVLSGDKYSYGLCRPPGHHATSSLYGGYCFFNNAAIAAHHIATTTGTKVAVLDVDYHHGNGTQEIFYDREDVLYVSLHGDPNRAYPYYLGHADETGTGKGA 247          
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A6I3EYT7_9ACTN (Histone deacetylase family protein n=2 Tax=root TaxID=1 RepID=A0A6I3EYT7_9ACTN)

HSP 1 Score: 353 bits (906), Expect = 2.090e-119
Identity = 168/246 (68.29%), Postives = 196/246 (79.67%), Query Frame = 1
Query:   13 MSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRG 750
            M VV+TA HL H P VE E+S    PFEH GRAE IR  L+ D RF  + P + G API AVH+ GL+RFL E W  +   + + R+V PDVF  P +R+KMS GREP++I GR+G+WCFETTT LT+ T+ AA  AVDTALTAT LVL+G  SAYGLCRPPGHHA++ +YGGYCFFNNAAIAAH +A+TTGTKVTVLDVDYHHGNGTQ+IFYDRDDVQYVSLHGDPARAYP+ +GFADETGSGRG
Sbjct:    1 MKVVHTAAHLLHDPQVEYESSIAQTPFEHIGRAEAIRATLQADPRFVVQHPTQWGTAPIAAVHNPGLIRFLAEGWDLYTAEHPDVREVVPDVFALPGLRSKMSLGREPTAIGGRVGYWCFETTTPLTQTTYTAALGAVDTALTATSLVLNGERSAYGLCRPPGHHATTDLYGGYCFFNNAAIAAHHVATTTGTKVTVLDVDYHHGNGTQQIFYDRDDVQYVSLHGDPARAYPYSVGFADETGSGRG 246          
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A4P5QZ88_9ACTN (Acetylpolyamine amidohydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5QZ88_9ACTN)

HSP 1 Score: 348 bits (893), Expect = 1.970e-117
Identity = 165/246 (67.07%), Postives = 187/246 (76.02%), Query Frame = 1
Query:   13 MSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRG 750
            M VVYT  HL H P  E+E S  H+PFEHTGRAE I++ L  D RF FR P  HG  PI+A+HD GL+ FL  AWAE+Q   G+ R+V PD FYR  IRN+M   +EP +I  RLGWWCFETTT LT+GT+ AA +AVDTALTAT  VL G  + YGLCRPPGHHA+  +YGGYCFFNNAAIAAH I   TG KVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDP RAYP+  G ADETG+G+G
Sbjct:    1 MQVVYTPKHLLHDPATEIEASTTHSPFEHTGRAETIKSALAADPRFTFREPTDHGTEPIKAIHDEGLIDFLSVAWAEYQKVVGDRREVVPDFFYRDEIRNQMGATKEPEAITARLGWWCFETTTPLTKGTYEAARAAVDTALTATDAVLGGERAVYGLCRPPGHHATRDLYGGYCFFNNAAIAAHDIVRRTGGKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPRRAYPYFTGHADETGTGKG 246          
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Match: A0A0R2QDZ7_9ACTN (Hist_deacetyl domain-containing protein n=18 Tax=root TaxID=1 RepID=A0A0R2QDZ7_9ACTN)

HSP 1 Score: 342 bits (877), Expect = 6.240e-115
Identity = 156/246 (63.41%), Postives = 193/246 (78.46%), Query Frame = 1
Query:   13 MSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARFAFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRPAIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQLVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVTVLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRG 750
            + VVY+  HL H+P+VE+E S  H+PFEHTGRAEKIR  L  D  F F  P   G  PI  +H+ GL++FL  AWA++Q    E+R+V PD+F++  +R  M D  EP S+NG+LGWWCFETTT LT GT+ AA  AVD A++AT++VLDGA ++YGLCRPPGHHA++ +YGGYCFFNNAAIAAH +ASTTGTKVTVLDVDYHHGNGTQ+IFY+RDDVQ+VSLHGDP RAYP+  G+ DE GSG+G
Sbjct:    3 VKVVYSPAHLLHNPEVEIERSSAHSPFEHTGRAEKIRETLAADKAFDFVSPTEWGTEPITKIHNPGLLKFLSTAWADYQRDVKESREVVPDMFFKSNLRQNMGDRVEPESVNGKLGWWCFETTTPLTMGTYEAARGAVDVAMSATKIVLDGAKNSYGLCRPPGHHATTDLYGGYCFFNNAAIAAHHVASTTGTKVTVLDVDYHHGNGTQQIFYERDDVQFVSLHGDPVRAYPYFTGYEDEVGSGKG 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8265.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A539E3U1_9ACTN5.880e-12772.36Histone deacetylase superfamily protein n=1 Tax=Ac... [more]
A0A7X9KHM5_9ACTN1.110e-12670.73Histone deacetylase family protein (Fragment) n=1 ... [more]
A0A6I3WW05_9ACTN8.230e-12468.98Histone deacetylase family protein n=2 Tax=root Ta... [more]
A0A0R2PYW9_9ACTN3.290e-12369.08Hist_deacetyl domain-containing protein n=1 Tax=Ac... [more]
A0A094PBA7_9ACTN5.470e-12269.51Hist_deacetyl domain-containing protein n=6 Tax=ro... [more]
A0A6I2VWJ8_9ACTN6.330e-12168.29Histone deacetylase family protein n=3 Tax=root Ta... [more]
A0A4P5S0L1_9ACTN1.040e-11968.42Acetylpolyamine amidohydrolase n=1 Tax=Actinomycet... [more]
A0A6I3EYT7_9ACTN2.090e-11968.29Histone deacetylase family protein n=2 Tax=root Ta... [more]
A0A4P5QZ88_9ACTN1.970e-11767.07Acetylpolyamine amidohydrolase n=1 Tax=Actinomycet... [more]
A0A0R2QDZ7_9ACTN6.240e-11563.41Hist_deacetyl domain-containing protein n=18 Tax=r... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8265contigP-wetherbeei_contig8265:2103..2855 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1342301.JASD01000008_gene3368
Preferred nameaphA
PFAMsHist_deacetyl
Model size753
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.58e-66
EggNOG OGsCOG0123@1|root,COG0123@2|Bacteria,1MU7P@1224|Proteobacteria,2TRRH@28211|Alphaproteobacteria,3ZXBK@60136|Sulfitobacter
DescriptionHistone deacetylase domain
Cds size753
COG categoryBQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187030.4140284-CDS-P-wetherbeei_contig8265:2102..28551683187030.4140284-CDS-P-wetherbeei_contig8265:2102..2855Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8265 2103..2855 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8265.2.1prot_P-wetherbeei_contig8265.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8265 2103..2855 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8265.2.1

>prot_P-wetherbeei_contig8265.2.1 ID=prot_P-wetherbeei_contig8265.2.1|Name=mRNA_P-wetherbeei_contig8265.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
MAAPMSVVYTADHLRHSPDVEVENSRIHAPFEHTGRAEKIRTVLEGDARF
AFRGPDRHGLAPIEAVHDTGLVRFLGEAWAEFQLANGETRDVFPDVFYRP
AIRNKMSDGREPSSINGRLGWWCFETTTALTEGTFVAACSAVDTALTATQ
LVLDGAPSAYGLCRPPGHHASSTMYGGYCFFNNAAIAAHRIASTTGTKVT
VLDVDYHHGNGTQEIFYDRDDVQYVSLHGDPARAYPFVIGFADETGSGRG
A
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mRNA from alignment at P-wetherbeei_contig8265:2103..2855+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8265.2.1 ID=mRNA_P-wetherbeei_contig8265.2.1|Name=mRNA_P-wetherbeei_contig8265.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig8265:2103..2855+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGCCCCGATGTCCGTCGTCTACACCGCCGATCACCTGCGTCACAG CCCGGACGTCGAAGTCGAGAACTCGCGGATCCACGCCCCGTTCGAGCACA CCGGTCGTGCCGAGAAGATCCGTACGGTGCTGGAAGGTGATGCCCGGTTC GCCTTCCGCGGGCCGGATCGGCACGGCCTGGCGCCGATCGAAGCGGTGCA CGACACCGGGCTCGTGCGGTTCCTCGGCGAGGCGTGGGCCGAGTTCCAGC TGGCCAACGGCGAGACGCGCGACGTGTTCCCCGACGTGTTCTATCGACCG GCGATCCGCAACAAGATGAGCGACGGACGTGAGCCGTCCAGCATCAACGG CCGGCTCGGCTGGTGGTGCTTCGAGACGACGACCGCGCTGACCGAGGGCA CGTTCGTCGCCGCGTGCAGCGCGGTGGACACCGCGCTCACGGCCACGCAG CTCGTGCTCGACGGCGCCCCGTCGGCGTACGGCCTGTGCCGGCCGCCGGG TCACCACGCCAGCTCGACGATGTACGGCGGCTACTGCTTCTTCAACAACG CGGCGATCGCCGCGCACCGGATCGCCAGCACCACCGGCACGAAGGTGACG GTGCTCGACGTCGACTACCACCACGGCAACGGGACGCAGGAGATCTTCTA CGACCGTGACGACGTGCAGTACGTGTCGCTCCACGGCGACCCGGCGCGCG CCTACCCGTTCGTGATCGGCTTCGCCGACGAGACCGGCAGCGGCAGGGGA GCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8265:2103..2855+

>mRNA_P-wetherbeei_contig8265.2.1 ID=mRNA_P-wetherbeei_contig8265.2.1|Name=mRNA_P-wetherbeei_contig8265.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig8265:2103..2855+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGCCCCGATGTCCGTCGTCTACACCGCCGATCACCTGCGTCACAG
CCCGGACGTCGAAGTCGAGAACTCGCGGATCCACGCCCCGTTCGAGCACA
CCGGTCGTGCCGAGAAGATCCGTACGGTGCTGGAAGGTGATGCCCGGTTC
GCCTTCCGCGGGCCGGATCGGCACGGCCTGGCGCCGATCGAAGCGGTGCA
CGACACCGGGCTCGTGCGGTTCCTCGGCGAGGCGTGGGCCGAGTTCCAGC
TGGCCAACGGCGAGACGCGCGACGTGTTCCCCGACGTGTTCTATCGACCG
GCGATCCGCAACAAGATGAGCGACGGACGTGAGCCGTCCAGCATCAACGG
CCGGCTCGGCTGGTGGTGCTTCGAGACGACGACCGCGCTGACCGAGGGCA
CGTTCGTCGCCGCGTGCAGCGCGGTGGACACCGCGCTCACGGCCACGCAG
CTCGTGCTCGACGGCGCCCCGTCGGCGTACGGCCTGTGCCGGCCGCCGGG
TCACCACGCCAGCTCGACGATGTACGGCGGCTACTGCTTCTTCAACAACG
CGGCGATCGCCGCGCACCGGATCGCCAGCACCACCGGCACGAAGGTGACG
GTGCTCGACGTCGACTACCACCACGGCAACGGGACGCAGGAGATCTTCTA
CGACCGTGACGACGTGCAGTACGTGTCGCTCCACGGCGACCCGGCGCGCG
CCTACCCGTTCGTGATCGGCTTCGCCGACGAGACCGGCAGCGGCAGGGGA
GCG
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