mRNA_P-wetherbeei_contig826.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig826.2.2
Unique NamemRNA_P-wetherbeei_contig826.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: A0A0P1AC50_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AC50_PLAHL)

HSP 1 Score: 222 bits (565), Expect = 3.610e-61
Identity = 130/360 (36.11%), Postives = 185/360 (51.39%), Query Frame = 3
Query:   15 CDTMSEVASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALRVAAKGNVKSSIADVAWS-HADSSNGLIAAAMTSGAVAIWDINQAARMAQAASHPTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTKPQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFVPLAVLE 1091
            C   S  AS+    PL +L LSP+    A+GGRDV+K+VA+   G  +++ LRV  K ++  S  D+ W  H+D    L+A A T+GAV IW++ +                                                                        +RVL  H+RAVNR+ WH +D NIL+S SQD T+++WDKRG  V   LT++PKS+ VRD + SP HP++FAAAF+NG++QVWD RK  QPELK  AH   +++IDWHP     +A+G RDR VK W L      D +     P  T+  +  VGRV WRP  V  IAT+    D+   ++D+++PF+P+A ++
Sbjct:    4 CTAASVRASMEFNGPLNALSLSPNNRLVAVGGRDVLKVVALEASGFTEKRNLRVVGKPSLNFSTNDIRWHPHSDY---LLATAATNGAVVIWNLEREGYK-----------------------------------------------------------------YVQERVLNGHRRAVNRICWHTSDWNILISGSQDGTVKLWDKRGGKV--MLTYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNAQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVKIWGLR-----DVRQ----PKQTIQTIASVGRVAWRPTFVTHIATSASLVDNSIHVWDIKRPFIPIASMK 284          
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: A0A6A3M4F6_9STRA (ANAPC4_WD40 domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3M4F6_9STRA)

HSP 1 Score: 218 bits (554), Expect = 7.070e-61
Identity = 129/358 (36.03%), Postives = 186/358 (51.96%), Query Frame = 3
Query:   18 DTMSEVASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALRVAAKGNVKSSIADVAWSHADSSNGLIAAAMTSGAVAIWDINQAARMAQAASHPTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTKPQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFVPLAVLE 1091
            +  S  AS+    PL +L  SP+    A+GGRDV+K+VA+   G  +++ LRVA K ++  S  D+ W H  S + L+A A T+GAV IW++ +     +   H                                                              +RVL  H+RAVNR+ WH  D N+L+S SQD T+++WDKRG  V    T++PKS+ VRD + SP HP++FAAAF+NG++QVWD RK  QPELK  AH   +++IDWHP     +A+G RDR VK W+L     GD +     P  T+  +  VGRV WRP  V  IAT+    D+   ++D ++PF+P+A ++
Sbjct:    3 EQRSVRASMDFNGPLNALSTSPNNRLIAVGGRDVLKVVALEAAGFSEKRNLRVAGKPSLNFSTNDIRW-HPQSDS-LLATAATNGAVVIWNLER-----EGYKHV------------------------------------------------------------QERVLNGHRRAVNRICWHTTDWNVLISGSQDGTVKLWDKRGGKVVS--TYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNSQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVKIWEL-----GDVRQ----PKQTIQTIASVGRVAWRPTCVTHIATSASLMDNSIHVWDTKRPFIPVASMK 282          
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: A0A835YP21_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP21_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.490e-60
Identity = 86/124 (69.35%), Postives = 106/124 (85.48%), Query Frame = 3
Query:  513 SDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVK 884
            S+RV+ EHQR VNRVAWHP++  +LLSCS DN++++WD+RGR+  C +TFRP+S+ VRD QFSP  P RFAAAF+NG LQVWDRRK  QP+LK+MAHSQP+MAIDWHP R+W IATGSRDRTV+
Sbjct:   98 SERVMVEHQRTVNRVAWHPSEPALLLSCSMDNSIKLWDRRGRTHHCAVTFRPRSEAVRDVQFSPFQPHRFAAAFENGQLQVWDRRKVSQPQLKIMAHSQPIMAIDWHPMRDWVIATGSRDRTVR 221          
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: A0A225WIZ9_9STRA (ANAPC4_WD40 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WIZ9_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.110e-59
Identity = 129/352 (36.65%), Postives = 183/352 (51.99%), Query Frame = 3
Query:   36 ASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALRVAAKGNVKSSIADVAWSHADSSNGLIAAAMTSGAVAIWDINQAARMAQAASHPTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTKPQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFVPLAVLE 1091
            AS+    PL +L  SP+    A+GGRDV+K+VA+   G  +++ LRVA K ++  S  D+ W H  S   L+A A T+GAV IW++ +     +   H                                                              +RVL  H+RAVNR+ WH  D N+L+S SQD T+++WDKRG  V    T++PKS+ VRD + SP HP++FAAAF+NG++QVWD RK  QPELK  AH   +++IDWHP     IA+G RDR VK W+L     GD +     P  T+  +  VGRV WRP  V  IAT+    D+   ++D ++PF+P+A ++
Sbjct:   11 ASMDFNGPLNALSTSPNNRLIAVGGRDVLKVVALEASGFTEKRNLRVAGKPSLNFSTNDIRW-HPQSDY-LLATAATNGAVVIWNLER-----EGYKHV------------------------------------------------------------QERVLNGHRRAVNRICWHTTDWNVLISGSQDGTVKLWDKRGGKVVS--TYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNSQPELKFTAHKGLVLSIDWHPTDANVIASGGRDRYVKIWEL-----GDVRQ----PKQTIQTIASVGRVAWRPTCVTHIATSASLMDNSIHVWDTKRPFIPVASMK 284          
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: A0A5D6XR99_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR99_9STRA)

HSP 1 Score: 216 bits (549), Expect = 5.730e-59
Identity = 129/353 (36.54%), Postives = 184/353 (52.12%), Query Frame = 3
Query:   36 ASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALRVAAKGNVKSSIADVAWS-HADSSNGLIAAAMTSGAVAIWDINQAARMAQAASHPTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTKPQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFVPLAVLE 1091
            AS+    PL +L  SP+  F A+GGRDV+K+VA+   G  +++ LRV  K ++  S  D+ W  HADS   ++A A T+GAV IW++ +     +   H                                                              +RVL  H+RAVNR+ WH  D N+L+S SQD T+++WDKRG+  +   T++PKS+ VRD + SP  P RFAAAF+NG++QVWD RK  QP+LK  AH   ++A+DWHP R   +A+G RDR VK WDL      D K     P  T+  +  VGRV WRP     IAT+    D+   ++DV++PF+P+A ++
Sbjct:    8 ASIDFSGPLNALSTSPNNRFVAVGGRDVLKVVALETAGFAEKRNLRVG-KASLNFSTNDIRWHPHADS---VLATAATNGAVVIWNLQR-----EGFKHV------------------------------------------------------------QERVLTGHRRAVNRICWHTTDWNVLISGSQDGTIKIWDKRGKVTN---TYQPKSESVRDVRMSPFDPHRFAAAFENGIVQVWDIRKNAQPQLKFTAHKGLVLALDWHPTRPHVLASGGRDRYVKIWDLD-----DLKQ----PKQTIQTIASVGRVLWRPNCPDHIATSASLMDNSVHVWDVQRPFIPIASMK 279          
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: G4YXX7_PHYSP (ANAPC4_WD40 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YXX7_PHYSP)

HSP 1 Score: 215 bits (547), Expect = 9.470e-59
Identity = 127/352 (36.08%), Postives = 183/352 (51.99%), Query Frame = 3
Query:   36 ASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALRVAAKGNVKSSIADVAWSHADSSNGLIAAAMTSGAVAIWDINQAARMAQAASHPTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTKPQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFVPLAVLE 1091
            AS+    PL +L  SP+    A+GGRDV+K+VA+   G  +++ LRVA K ++  S  D+ W H  S   L+A A T+GAV IW++ +     +   H                                                              +RVL  H+R+VNR+ WH  D N+L+S SQD T+++WDKRG  V    T++PKS+ VRD + SP HP++FAAAF+NG++QVWD RK  QPELK  AH   +++IDWHP     +A+G RDR VK W+L     GD +     P  T+  +  VGRV WRP  V  IAT+    D+   ++D ++PF+P+A ++
Sbjct:   11 ASMDFSGPLNALSTSPNNRLIAVGGRDVLKVVALEAAGFSEKRNLRVAGKPSLNFSTNDIRW-HPQSDY-LLATAATNGAVVIWNLER-----EGYKHV------------------------------------------------------------QERVLNGHRRSVNRICWHTTDWNVLISGSQDGTVKLWDKRGGKVVS--TYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNSQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVKIWEL-----GDVRQ----PKQTIQTIASVGRVAWRPTCVTHIATSASLMDNSIHVWDTKRPFIPVASMK 284          
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: M4BGE8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGE8_HYAAE)

HSP 1 Score: 213 bits (541), Expect = 4.150e-58
Identity = 125/352 (35.51%), Postives = 181/352 (51.42%), Query Frame = 3
Query:   36 ASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALRVAAKGNVKSSIADVAWSHADSSNGLIAAAMTSGAVAIWDINQAARMAQAASHPTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTKPQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFVPLAVLE 1091
            AS+    PL +L  SP+    A+GGRDV+K+VA+   G  +++ LRV  K ++  S  D+ W H  S+  L+A A T+GAV IW++ +         H                                                              +RVL  H+RAVNR+ WH  D N+L+S SQD T+++WDKRG  V    T++PKS+ VRD + SP HP++FAAAF+NG++QVWD RK  QPELK  AH   ++ +DWHP     +A+G RDR VK W+L+     D +     P  T+  +  VGRV WRP  V  IAT+    D+   ++D ++PF+P+A ++
Sbjct:    7 ASMDFNGPLNALSTSPNNRLIAVGGRDVLKVVALEASGFTEKRNLRVVGKPSLNFSTNDIRW-HPHSAY-LLATAATNGAVGIWNLER-----DGYKHV------------------------------------------------------------QERVLNGHRRAVNRICWHTTDWNVLISGSQDGTVKLWDKRGGKVVS--TYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNTQPELKFTAHKGLVLTVDWHPTNANVLASGGRDRYVKIWELA-----DVRQ----PKQTIQTIASVGRVSWRPAGVMHIATSASLMDNSIHMWDTKRPFIPVASMK 280          
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: A0A3M6VR55_9STRA (ANAPC4_WD40 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VR55_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.930e-57
Identity = 126/353 (35.69%), Postives = 181/353 (51.27%), Query Frame = 3
Query:   36 ASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALRVAAKGNVKSSIADVAWS-HADSSNGLIAAAMTSGAVAIWDINQAARMAQAASHPTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTKPQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFVPLAVLE 1091
            AS+    PL +L  SP+    A+GGRDV+K+VA+   G  +++ LRV  K ++  S  D+ W  H+D    L+A A T+GAV IW++ +         H                                                              +RVL  H+RAVNR+ WH  D N+L+S SQD T+++WDKRG  V    T++PKS+ VRD + SP H ++FAAAF+NG++QVWD RK  QPELK  AH   +++IDWHP     +A+G RDR VK W+L     GD +     P  T+  +  VGRV WRP  V  IAT+    D+   ++D ++PF+P+A ++
Sbjct:   13 ASMDFNGPLNALSTSPNNHLIAVGGRDVLKVVALEAAGFTEKRNLRVIGKPSLNFSTNDIRWHPHSDY---LLATAATNGAVVIWNLER-----DGYKHV------------------------------------------------------------QERVLNGHRRAVNRICWHTTDWNVLISGSQDGTVKLWDKRGGKVVS--TYQPKSESVRDVRASPFHSNKFAAAFENGIVQVWDMRKNTQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVKIWEL-----GDVRQ----PKQTIQTIASVGRVAWRPTCVTHIATSASLMDNSIHVWDTKKPFIPVASMK 286          
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: A0A024GBD5_9STRA (Uncharacterized protein n=7 Tax=Albugo candida TaxID=65357 RepID=A0A024GBD5_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.190e-57
Identity = 126/351 (35.90%), Postives = 185/351 (52.71%), Query Frame = 3
Query:   36 ASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALRVAAKGNVKSSIADVAWSHADSSNGLIAAAMTSGAVAIWDINQAARMAQAASHPTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTKPQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFVPLAVL 1088
            +S+    PL +L +SP+    A+GGRDV++I+A+   G  +++ LR A K ++  S  D+ W H  S N L+A A T+G V IW++ +         H  G                                                          S+RVL  H+RAVNR+ WHP D N+L+S SQD T+++WDKRG++ +    ++P+S+ VRD +FS   P+RFAAAF+NG++Q+WD RK   PELK  AH   ++++DWHP R   +A+G RDR VK WDLS     D K Q   P  T+  +  VGRV WRP    QIAT+    D++  ++D ++P +PLA +
Sbjct:   18 SSVDFNGPLNALAISPNNKLVAVGGRDVLRIMALEAMGFSEKRNLR-AGKSSLNFSTNDIRW-HPQS-NHLLATAATNGVVVIWNLQK-----DGYKHVQGTFCDRNRHCIDSV---------------------------------------------SERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGKAGN---VYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDM---DMKQQ---PHQTIQTIASVGRVAWRPNCSDQIATSASLMDNNIHLWDTQRPCIPLASM 306          
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Match: A0A425CG90_9STRA (Trimethylguanosine synthase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CG90_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.850e-57
Identity = 126/353 (35.69%), Postives = 181/353 (51.27%), Query Frame = 3
Query:   36 ASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALRVAAKGNVKSSIADVAWS-HADSSNGLIAAAMTSGAVAIWDINQAARMAQAASHPTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMWDKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKAHQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTKPQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFVPLAVLE 1091
            AS+    PL +L  SP+    A+GGRDV+K+VA+   G  +++ LRV  K ++  S  D+ W  H+D    L+A A T+GAV IW++ +         H                                                              +RVL  H+RAVNR+ WH  D N+L+S SQD T+++WDKRG  V    T++PKS+ VRD + SP H ++FAAAF+NG++QVWD RK  QPELK  AH   +++IDWHP     +A+G RDR VK W+L     GD +     P  T+  +  VGRV WRP  V  IAT+    D+   ++D ++PF+P+A ++
Sbjct:   13 ASMDFNGPLNALSTSPNNHLIAVGGRDVLKVVALEAAGFTEKRNLRVIGKPSLNFSTNDIRWHPHSDY---LLATAATNGAVVIWNLER-----DGYKHV------------------------------------------------------------QERVLNGHRRAVNRICWHTTDWNVLISGSQDGTVKLWDKRGGKVVS--TYQPKSESVRDVRASPFHSNKFAAAFENGIVQVWDMRKNTQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVKIWEL-----GDVRQ----PKQTIQTIASVGRVAWRPTCVTHIATSASLMDNSIHVWDTKKPFIPVASMK 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig826.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P1AC50_PLAHL3.610e-6136.11Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A6A3M4F6_9STRA7.070e-6136.03ANAPC4_WD40 domain-containing protein n=1 Tax=Phyt... [more]
A0A835YP21_9STRA1.490e-6069.35WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A225WIZ9_9STRA1.110e-5936.65ANAPC4_WD40 domain-containing protein n=1 Tax=Phyt... [more]
A0A5D6XR99_9STRA5.730e-5936.54Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
G4YXX7_PHYSP9.470e-5936.08ANAPC4_WD40 domain-containing protein n=4 Tax=Phyt... [more]
M4BGE8_HYAAE4.150e-5835.51Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VR55_9STRA1.930e-5735.69ANAPC4_WD40 domain-containing protein n=1 Tax=Pero... [more]
A0A024GBD5_9STRA2.190e-5735.90Uncharacterized protein n=7 Tax=Albugo candida Tax... [more]
A0A425CG90_9STRA3.850e-5735.69Trimethylguanosine synthase n=1 Tax=Peronospora ef... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig826contigP-wetherbeei_contig826:2335..5055 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog115417.EPrPW00000015325
PFAMsWD40,Zn_ribbon_17
Model size1115
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons8
Evalue1.35e-59
EggNOG OGsKOG0269@1|root,KOG0269@2759|Eukaryota,1MF7Z@121069|Pythiales
DescriptionWD repeat
Cds size1092
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig826.2.2prot_P-wetherbeei_contig826.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig826 2358..5055 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187029.9889736-UTR-P-wetherbeei_contig826:2334..23571683187029.9889736-UTR-P-wetherbeei_contig826:2334..2357Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig826 2335..2357 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187029.9987326-CDS-P-wetherbeei_contig826:2357..24591683187029.9987326-CDS-P-wetherbeei_contig826:2357..2459Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig826 2358..2459 +
1683187030.0081918-CDS-P-wetherbeei_contig826:2649..27261683187030.0081918-CDS-P-wetherbeei_contig826:2649..2726Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig826 2650..2726 +
1683187030.0178504-CDS-P-wetherbeei_contig826:2916..30131683187030.0178504-CDS-P-wetherbeei_contig826:2916..3013Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig826 2917..3013 +
1683187030.0285125-CDS-P-wetherbeei_contig826:3220..35231683187030.0285125-CDS-P-wetherbeei_contig826:3220..3523Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig826 3221..3523 +
1683187030.0387383-CDS-P-wetherbeei_contig826:3841..39911683187030.0387383-CDS-P-wetherbeei_contig826:3841..3991Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig826 3842..3991 +
1683187030.0490928-CDS-P-wetherbeei_contig826:4269..43911683187030.0490928-CDS-P-wetherbeei_contig826:4269..4391Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig826 4270..4391 +
1683187030.062069-CDS-P-wetherbeei_contig826:4628..47821683187030.062069-CDS-P-wetherbeei_contig826:4628..4782Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig826 4629..4782 +
1683187030.0720005-CDS-P-wetherbeei_contig826:4968..50551683187030.0720005-CDS-P-wetherbeei_contig826:4968..5055Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig826 4969..5055 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig826.2.2

>prot_P-wetherbeei_contig826.2.2 ID=prot_P-wetherbeei_contig826.2.2|Name=mRNA_P-wetherbeei_contig826.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=364bp
MSEVASLPLGQPLLSLCLSPDLFFAAIGGRDVMKIVAITPDGIFDRKALR
VAAKGNVKSSIADVAWSHADSSNGLIAAAMTSGAVAIWDINQAARMAQAA
SHPTGGGGGNGSGPSGSRGVRALGKGVGARFGIGIALGGSGATAGGGGGG
GGGVGGVTLGGLQSDRVLAEHQRAVNRVAWHPADANILLSCSQDNTLRMW
DKRGRSVSCQLTFRPKSDGVRDAQFSPAHPDRFAAAFDNGMLQVWDRRKA
HQPELKLMAHSQPLMAIDWHPRREWTIATGSRDRTVKAWDLSCFGWGDTK
PQSALPTHTVHCVQPVGRVKWRPQHVYQIATAPGTGDSDTFIYDVRQPFV
PLAVLEPATGRSRP
back to top

mRNA from alignment at P-wetherbeei_contig826:2335..5055+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig826.2.2 ID=mRNA_P-wetherbeei_contig826.2.2|Name=mRNA_P-wetherbeei_contig826.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2721bp|location=Sequence derived from alignment at P-wetherbeei_contig826:2335..5055+ (Phaeothamnion wetherbeei SAG_119_79)
TCCAGTTTTACGGATGCGATACGATGAGCGAAGTCGCTTCGCTGCCGCTG GGGCAGCCTCTGCTTTCGCTATGCTTGTCTCCTGACCTCTTTTTCGCTGC CATCGGGGGGCGCGATGTCATGAAGGTAAGTATGGCTTTGATGCAGTGCA AGAGAAGCACGAGGAGCGATAATATGCTGTAGATGTCGCGAAGGTGTATC AACGCTGACTTGCTATTAGAAAGAAGGATATACGTGCAGGACAAAGAGAG AAAATTTCAATCCACGTTTTGGACCTCACAGCGATTGCCCTCACGGCCCT GCAATTGCCCCACAGATCGTTGCAATCACGCCCGATGGCATCTTCGATCG TAAAGCGCTCAGGGTCGCCGCGAAGGGGAACGTCAAGTCGAGGTATCGAT TCTTTCTTCCGTTCCCTTCGCTTCTTCAAAGCTACTTCCTTTGATATCGT CGAATCGGGCTTTCGGCGATCGTCGTCGCTTGCAGTGCTTTTCACGGCGT CATTTATGTTGCTCTGTCTCAGCGACGTTCTCCAAACGTTAGTGACTCCT TGTTTGCATCATGTTGTTTGTCCTGGTGGCAGCATTGCCGACGTTGCGTG GTCTCACGCCGACTCATCGAACGGGCTCATAGCGGCGGCCATGACCAGCG GTGCGGTCGCCATTTGGGACATCAATCAGGTCAGGATGGAGTGCAGCCAT TCGCATCGACTATTGGCCCGTATTTTCGTCCCCGCCTTTCACATTTTGGT AGATCCACCAGCCCACTTTCTGTAATAATCGAACTTTGCGTCTTCGCTGC TGCAAGCTGTGATTCTGAATTATGCCGAAAAGAGATTTTCTCAATGCCCC ACGAACCTGCCGGTATTCATTTGCCGTGACCTATAGGCTGCGCGAATGGC CCAGGCCGCAAGCCATCCCACAGGTGGTGGTGGCGGCAATGGGAGCGGCC CCAGCGGTAGCAGGGGAGTCCGCGCCCTCGGCAAGGGCGTCGGAGCGCGC TTCGGCATCGGCATTGCTCTGGGCGGCAGCGGCGCGACGGCTGGAGGCGG TGGCGGCGGCGGCGGCGGTGTCGGCGGAGTAACGCTTGGCGGCCTCCAGA GCGACCGCGTATTGGCGGAGCACCAGCGGGCGGTGAATCGCGTGGCATGG CATCCTGCGGACGCCAACATTCTTCTTAGCTGCTCTCAAGTGAGGGATTT GGACAAGATGGGGTGGGAAGATTGGGGTTAGTGTCAATGCCGTTCGCCTG CGGCTGCGGTAGTTGTAGCGTGGCGCCAGCGCCGCTGCCATTGGGATTGG AAGGGGTAGAAGAGGCAAATTCTTGCTGCCTTCTGTGTTCTTGTGCTGGC GACATCTGTCGAAATGGCTCGTGTTTTCTTCGTTAGCTGGGCGACCGGGC TTCACTGTTCTTTTCTTCTGCCCCTCGCAAACAAAACATGCGGCGGCGGC GGTGCGGCGGCGGTGCGGGTGGCGGTGCGGCGGCTCTGGCGGGGATTGTC GCGGCAGGACAACACGCTGCGGATGTGGGACAAGCGGGGGCGGTCGGTGA GTTGCCAGCTGACCTTCAGGCCCAAGAGCGACGGCGTCCGCGACGCGCAA TTCTCCCCAGCGCACCCCGATCGCTTCGCCGCAGCCTTCGACAACGGCAT GCTCCAGGTCAGACGATGAAAGGCTATTCTTCGCAGGATGAAAAGGCGGT TCCTTTCTTGTGTTACCTATTCTTCTTTCTTATCGTTAACTGTAGTCGAT ATCTGCCTCTGTGGGTCCAGGTTCCTTTCTTCAAGCGCCGGCTTCCATTT TTAAAATCCATCTCAATTCACCGGTTAATTCCGCCGTCTCTTTGCTGGCC CATTACTGGCCCAGCAGGCTTCTTGCTGGGGGCAAACGCCGGCTCCTCAT GATTCGCGCATGATAAAAACGCCCACCTGTTGCAGGTGTGGGACCGGCGG AAGGCGCACCAGCCGGAGCTGAAGCTGATGGCGCACAGCCAGCCGCTTAT GGCCATCGACTGGCACCCGCGCCGCGAGTGGACTATCGCGACCGGCTCTC GCGACAGGTCTGTCAGTTTGCAGCGCACACCTGCTGAGTCTCGGCCAGTT GGTGTTTTGTTGGAACTTATCTACTGCCTGCCGCCACTGCCATTAGCTGT TGGTGCCGCCTCGCCTTCAAGGCTTGGGCTACATTGCTCCTTAGCTGCCG CAACACATAGGCCGTAACTCTCATCTACGGGCCGCTGCTCTCAAGCATTT CTGTTGCCGCCGCCTCCCGCTGCCTTGGCCCCTATTCTCCACAGGACGGT AAAGGCGTGGGACCTGTCGTGCTTCGGGTGGGGCGACACCAAACCGCAGT CGGCGTTGCCGACGCACACCGTCCACTGCGTGCAGCCAGTGGGGCGCGTC AAGTGGCGGCCGCAGCACGTCTACCAGATCGCCACCGCCCCCGGCACGGT GCGTTCGGGTTCCGCGGCGGCCGCCCGCATGTGTGCCATGGCGCAGGGTT TTGCCTTCCGCTCGGCGTTTTGTGGTTGTAAGCATATTTTAAGTCAAACG TCTAGTAACGTACGACTGAACGCTACAATTCATCCGCACTCTTCACATCC CTTCCCTCCACTCCGCCCAAAAAACGTCGCGCAGGGCGACAGCGATACCT TCATCTACGATGTCCGCCAGCCGTTTGTTCCGCTGGCGGTGCTGGAGCCC GCCACCGGCCGCAGCCGCCCT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig826:2335..5055+

>mRNA_P-wetherbeei_contig826.2.2 ID=mRNA_P-wetherbeei_contig826.2.2|Name=mRNA_P-wetherbeei_contig826.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig826:2335..5055+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGAAGTCGCTTCGCTGCCGCTGGGGCAGCCTCTGCTTTCGCTATG
CTTGTCTCCTGACCTCTTTTTCGCTGCCATCGGGGGGCGCGATGTCATGA
AGATCGTTGCAATCACGCCCGATGGCATCTTCGATCGTAAAGCGCTCAGG
GTCGCCGCGAAGGGGAACGTCAAGTCGAGCATTGCCGACGTTGCGTGGTC
TCACGCCGACTCATCGAACGGGCTCATAGCGGCGGCCATGACCAGCGGTG
CGGTCGCCATTTGGGACATCAATCAGGCTGCGCGAATGGCCCAGGCCGCA
AGCCATCCCACAGGTGGTGGTGGCGGCAATGGGAGCGGCCCCAGCGGTAG
CAGGGGAGTCCGCGCCCTCGGCAAGGGCGTCGGAGCGCGCTTCGGCATCG
GCATTGCTCTGGGCGGCAGCGGCGCGACGGCTGGAGGCGGTGGCGGCGGC
GGCGGCGGTGTCGGCGGAGTAACGCTTGGCGGCCTCCAGAGCGACCGCGT
ATTGGCGGAGCACCAGCGGGCGGTGAATCGCGTGGCATGGCATCCTGCGG
ACGCCAACATTCTTCTTAGCTGCTCTCAAGACAACACGCTGCGGATGTGG
GACAAGCGGGGGCGGTCGGTGAGTTGCCAGCTGACCTTCAGGCCCAAGAG
CGACGGCGTCCGCGACGCGCAATTCTCCCCAGCGCACCCCGATCGCTTCG
CCGCAGCCTTCGACAACGGCATGCTCCAGGTGTGGGACCGGCGGAAGGCG
CACCAGCCGGAGCTGAAGCTGATGGCGCACAGCCAGCCGCTTATGGCCAT
CGACTGGCACCCGCGCCGCGAGTGGACTATCGCGACCGGCTCTCGCGACA
GGACGGTAAAGGCGTGGGACCTGTCGTGCTTCGGGTGGGGCGACACCAAA
CCGCAGTCGGCGTTGCCGACGCACACCGTCCACTGCGTGCAGCCAGTGGG
GCGCGTCAAGTGGCGGCCGCAGCACGTCTACCAGATCGCCACCGCCCCCG
GCACGGGCGACAGCGATACCTTCATCTACGATGTCCGCCAGCCGTTTGTT
CCGCTGGCGGTGCTGGAGCCCGCCACCGGCCGCAGCCGCCCT
back to top