mRNA_P-wetherbeei_contig824.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig824.1.1
Unique NamemRNA_P-wetherbeei_contig824.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: A0A835YVJ5_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVJ5_9STRA)

HSP 1 Score: 108 bits (271), Expect = 8.820e-28
Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 1
Query:    1 DAFSAILTRDFAYNKPDGRVAAAIATAWRVPPSHLLFVGDHRDDLACGRDAGCLTCLVANDENRFLLAEEPG-LADFSVENLAELPAIV 264
            + F+ +LTRDFA+NKPD RVA AI  AWR+PP+ + FVGDH DD+ACGR AGC+TCLV  +EN    AE+ G L D ++  L+ELPA++
Sbjct:  100 ELFAPVLTRDFAHNKPDARVALAIVRAWRLPPAAVAFVGDHVDDMACGRGAGCVTCLVRCEENDAFYAEDGGALVDHAIAALSELPALL 188          
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: A0A7C5EQN1_9BACT (HAD family hydrolase n=2 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C5EQN1_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 8.340e-15
Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = 1
Query:    4 AFSAILTRDFAYNKPDGRVAAAIATAWRVPPSHLLFVGDHRDDLACGRDAGCLTCLVANDENRFLLAEEPGLADFSVENLAEL 252
            AF  +L RDF   KPD      I   W +PP ++L VGD+RDD+ACGR AGC TCL+  + N    +E    AD +V  LA+L
Sbjct:  152 AFDPVLARDFGPVKPDPAPVRFICERWGLPPRNVLLVGDYRDDIACGRAAGCATCLLLRESNSQYRSE----ADLAVNRLADL 230          
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: G0VJ52_NAUCC (Uncharacterized protein n=1 Tax=Naumovozyma castellii (strain ATCC 76901 / BCRC 22586 / CBS 4309 / NBRC 1992 / NRRL Y-12630) TaxID=1064592 RepID=G0VJ52_NAUCC)

HSP 1 Score: 68.2 bits (165), Expect = 5.700e-12
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 1
Query:    7 FSAILTRDFAYNKPDGRVAAAIATAWRVPPSHLLFVGDHRDDLACGRDAGCLTCLVANDENRFLLAEEPGLADFSVENLAELPAIV 264
            F  I+TRDF   KP+      IA   +V P+ ++ VGD  DD+  GR AGC+T L+ N  N++LL +   L D SV++LA++  I+
Sbjct:  130 FEYIVTRDFRPAKPNPDPLLHIAKQLKVHPNEIMMVGDSFDDMRSGRSAGCVTMLLNNHVNKYLLQDHQDLIDNSVDSLADIIGII 215          
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: A0A261Y6V6_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y6V6_9FUNG)

HSP 1 Score: 65.5 bits (158), Expect = 6.840e-11
Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 1
Query:    4 AFSAILTRDFAYNKPDGRVAAAIATAWRVPPSHLLFVGDHRDDLACGRDAGCLTCLVAN--DENRFLLAEEPGLADFSVENLAELPAIV 264
            AF  ++TR F   KP       IA  W + P  +L VGD +DD+ CGR+AG +TC + N   E+  L  E+ G  D  ++ ++++  I+
Sbjct:  135 AFDPVITRKFKPTKPSPAPLLHIAKQWNMHPQEILMVGDGKDDMKCGREAGSVTCFMENKGQESAALECEKNGWVDLKIQRISQIKDIL 223          
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: UPI001068E6EC (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068E6EC)

HSP 1 Score: 61.6 bits (148), Expect = 1.800e-9
Identity = 34/82 (41.46%), Postives = 44/82 (53.66%), Query Frame = 1
Query:    7 FSAILTRDFAYNKPDGRVAAAIATAWRVPPSHLLFVGDHRDDLACGRDAGCLTCLVANDENRFLLAEEPGLADFSVENLAEL 252
            FS ILTRDF   KPD      I   W++   + + VGDH  D+ CG+ AG +T L+ ND N    A    +AD +V  L EL
Sbjct:  137 FSHILTRDFKPVKPDPAPVLHICKEWKIQCCNTVVVGDHLQDIKCGKAAGAVTVLINNDSN----ASFKEIADHNVNTLMEL 214          
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: UPI0009E18C45 (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E18C45)

HSP 1 Score: 60.1 bits (144), Expect = 8.610e-9
Identity = 31/82 (37.80%), Postives = 47/82 (57.32%), Query Frame = 1
Query:   19 LTRDFAYNKPDGRVAAAIATAWRVPPSHLLFVGDHRDDLACGRDAGCLTCLVANDENRFLLAEEPGLADFSVENLAELPAIV 264
            LTRDF   KPD      I   W V P  ++ VGDH +D+ CG+DAG +T L+ + +N     +    ADF+V++L E+  ++
Sbjct:  160 LTRDFTPPKPDPAPLLHICKEWGVHPRSVVMVGDHLNDIQCGKDAGSVTVLLNDSKN----GDFKKYADFNVDSLNEIVNLI 237          
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: A0A0G4HN13_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HN13_9ALVE)

HSP 1 Score: 58.9 bits (141), Expect = 2.880e-8
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 1
Query:    7 FSAILTRD-FAYNKPDGRVAAAIATAWRVPPSHLLFVGDHRDDLACGRDAGCLTCLVA-------NDENRFLLAEEPGLADFS 231
            F A+ +RD F   KP+  +   +   W + P+  +FVGD++DDL CGR+AG L+CL++       N    F  A  PGL +F+
Sbjct:  178 FDALFSRDCFEPVKPEPHIVHHLCDKWGISPAESIFVGDYKDDLLCGRNAGGLSCLISSGCPDRENAFREFADAIVPGLQEFA 260          
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: A0A7S1RR89_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RR89_ALECA)

HSP 1 Score: 55.5 bits (132), Expect = 9.480e-8
Identity = 29/55 (52.73%), Postives = 33/55 (60.00%), Query Frame = 1
Query:    4 AFSAILTRDFAY-NKPDGRVAAAIATAWRVPPSHLLFVGDHRDDLACGRDAGCLT 165
            AFS ILTRD    NKPD        + W + PS +L VGDH DD+ CGR AG LT
Sbjct:   25 AFSPILTRDSGLPNKPDPAPVLRCCSDWGLEPSSVLMVGDHVDDILCGRAAGSLT 79          
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: A0A6J1AXU9_9ROSI (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 n=2 Tax=Byttnerioideae TaxID=214909 RepID=A0A6J1AXU9_9ROSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.100e-7
Identity = 32/90 (35.56%), Postives = 53/90 (58.89%), Query Frame = 1
Query:    7 FSAILTRDFAYNKPDGRVAAAIATAWRVPPSHLLFVGDH-RDDLACGRDAGCLTCLVANDENRFLLAEEPGL---ADFSVENLAELPAIV 264
            F   L+R+F   KPD      I +AW V P+ ++ VGD  +DD+ACG+ AG +TCL+ ++  R++  +   L    DF V +L E+ +++
Sbjct:  150 FFPALSREFRPYKPDPAPLLHICSAWEVQPNEVMMVGDSLKDDVACGKQAGAVTCLL-DERGRYISQDFARLDLTPDFKVSSLNEVYSLL 238          
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Match: A0A6P5X2Y3_DURZI (haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5X2Y3_DURZI)

HSP 1 Score: 57.0 bits (136), Expect = 1.180e-7
Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 1
Query:    7 FSAILTRDFAYNKPDGRVAAAIATAWRVPPSHLLFVGDH-RDDLACGRDAGCLTCLVANDEN 189
            FS  L+R+F   KPD      I + W V P+ ++ VGD+ +DD+ACG+ AG LTCL+  DEN
Sbjct:  160 FSPALSREFCPCKPDPAPLLHICSTWGVQPNEVMMVGDNLKDDVACGKQAGALTCLL--DEN 219          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig824.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVJ5_9STRA8.820e-2857.30HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7C5EQN1_9BACT8.340e-1545.78HAD family hydrolase n=2 Tax=Lentisphaerae bacteri... [more]
G0VJ52_NAUCC5.700e-1240.70Uncharacterized protein n=1 Tax=Naumovozyma castel... [more]
A0A261Y6V6_9FUNG6.840e-1134.83Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
UPI001068E6EC1.800e-941.46haloacid dehalogenase-like hydrolase domain-contai... [more]
UPI0009E18C458.610e-937.80haloacid dehalogenase-like hydrolase domain-contai... [more]
A0A0G4HN13_9ALVE2.880e-837.35Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S1RR89_ALECA9.480e-852.73Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A6J1AXU9_9ROSI1.100e-735.56haloacid dehalogenase-like hydrolase domain-contai... [more]
A0A6P5X2Y3_DURZI1.180e-746.77haloacid dehalogenase-like hydrolase domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig824contigP-wetherbeei_contig824:82..345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog27288.XP_003677878.1
PFAMsHAD_2,Hydrolase,Hydrolase_like
Model size264
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
Exons1
Evalue9.35e-13
EggNOG OGsCOG0546@1|root,2QR7R@2759|Eukaryota,3A0JM@33154|Opisthokonta,3P1ZB@4751|Fungi,3QSZB@4890|Ascomycota,3RUA5@4891|Saccharomycetes,3S16A@4893|Saccharomycetaceae
DescriptionSaccharomyces cerevisiae YOR131C
Cds size264
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187028.6660638-CDS-P-wetherbeei_contig824:81..3451683187028.6660638-CDS-P-wetherbeei_contig824:81..345Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig824 82..345 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig824.1.1prot_P-wetherbeei_contig824.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig824 82..345 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig824.1.1

>prot_P-wetherbeei_contig824.1.1 ID=prot_P-wetherbeei_contig824.1.1|Name=mRNA_P-wetherbeei_contig824.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp
DAFSAILTRDFAYNKPDGRVAAAIATAWRVPPSHLLFVGDHRDDLACGRD
AGCLTCLVANDENRFLLAEEPGLADFSVENLAELPAIV
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mRNA from alignment at P-wetherbeei_contig824:82..345+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig824.1.1 ID=mRNA_P-wetherbeei_contig824.1.1|Name=mRNA_P-wetherbeei_contig824.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig824:82..345+ (Phaeothamnion wetherbeei SAG_119_79)
GACGCCTTCAGTGCGATCCTGACGCGCGACTTCGCCTACAACAAGCCCGA CGGGCGCGTCGCCGCCGCCATTGCCACCGCCTGGCGGGTGCCGCCGTCCC ACCTCCTCTTCGTCGGCGACCACCGCGACGACCTGGCCTGCGGCCGCGAC GCCGGCTGCCTCACGTGCCTGGTGGCGAACGATGAGAACCGCTTTCTGCT GGCGGAGGAGCCCGGGCTAGCGGACTTCAGCGTGGAGAACCTGGCGGAGC TGCCAGCAATCGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig824:82..345+

>mRNA_P-wetherbeei_contig824.1.1 ID=mRNA_P-wetherbeei_contig824.1.1|Name=mRNA_P-wetherbeei_contig824.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig824:82..345+ (Phaeothamnion wetherbeei SAG_119_79)
GACGCCTTCAGTGCGATCCTGACGCGCGACTTCGCCTACAACAAGCCCGA
CGGGCGCGTCGCCGCCGCCATTGCCACCGCCTGGCGGGTGCCGCCGTCCC
ACCTCCTCTTCGTCGGCGACCACCGCGACGACCTGGCCTGCGGCCGCGAC
GCCGGCTGCCTCACGTGCCTGGTGGCGAACGATGAGAACCGCTTTCTGCT
GGCGGAGGAGCCCGGGCTAGCGGACTTCAGCGTGGAGAACCTGGCGGAGC
TGCCAGCAATCGTG
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