mRNA_P-wetherbeei_contig8238.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8238.2.1
Unique NamemRNA_P-wetherbeei_contig8238.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: A0A1S8VH12_9FUNG (Mitotic checkpoint protein (Fragment) n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VH12_9FUNG)

HSP 1 Score: 82.8 bits (203), Expect = 1.010e-17
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 1 
Query:    1 VVSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQHPQDQVCV-CVRERESWPALFP 210
            VV+IWDG NKKR+ Q   YP  +S+L+F+ DGSLLA+ SSYTFE+GEK HP D + +  + E E  P + P
Sbjct:   13 VVNIWDGFNKKRIKQYPKYPTSVSSLSFNWDGSLLAVASSYTFEEGEKDHPPDSIYIRTINETEVRPKVVP 83
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: A0A6T7WF00_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A6T7WF00_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 1.650e-16
Identity = 42/73 (57.53%), Postives = 49/73 (67.12%), Query Frame = 1 
Query:    1 VVSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDG-EKQHPQDQVCVCVRERESWPALFPFP 216
            +V+IWDG NKKRL Q   YP  ISALAFS DG+LLA+ SSYTFE G + QHP D + V   +RE  P   P P
Sbjct:   41 LVNIWDGANKKRLHQYAPYPTSISALAFSADGALLAVASSYTFELGAQAQHPADSIYVRTVDREVMPKPKPPP 113
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: A0A1S8VTD6_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VTD6_9FUNG)

HSP 1 Score: 82.8 bits (203), Expect = 1.240e-15
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 1 
Query:    1 VVSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQHPQDQVCV-CVRERESWPALFP 210
            VV+IWDG NKKR+ Q   YP  +S+L+F+ DGSLLA+ SSYTFE+GEK HP D + +  + E E  P + P
Sbjct:  267 VVNIWDGFNKKRIKQYPKYPTSVSSLSFNWDGSLLAVASSYTFEEGEKDHPPDSIYIRTINETEVRPKVVP 337
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: A0A1Y1XYZ8_9FUNG (Mitotic checkpoint protein BUB3-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XYZ8_9FUNG)

HSP 1 Score: 82.4 bits (202), Expect = 1.630e-15
Identity = 38/76 (50.00%), Postives = 51/76 (67.11%), Query Frame = 1 
Query:    1 VVSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQHPQDQVCV-CVRERESWPALFPFPSEN 225
            V+++WDG NKKRL Q   YP  IS+LAFS DG++LA+ SSYT+E+GEK H  D + +  + + E  P   P PS N
Sbjct:  258 VINVWDGFNKKRLRQFPRYPTSISSLAFSCDGTMLAVASSYTYEEGEKDHAPDSIFIRTIADSEVKPKTLPNPSPN 333
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: M2WS12_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WS12_GALSU)

HSP 1 Score: 82.4 bits (202), Expect = 1.820e-15
Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1 
Query:    1 VVSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQHPQDQVCV-CVRERESWPALF 207
            VV+IWDGD+KKR+ QL  +P  IS+L+FS DGS LAI SSYTFE+GE+ HP D + V  V + E  P  F
Sbjct:  276 VVNIWDGDSKKRICQLRSFPCSISSLSFSSDGSQLAIASSYTFEEGERDHPPDALYVHSVADNEVLPRHF 345
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: A0A812W6H0_SYMMI (BUB3.1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W6H0_SYMMI)

HSP 1 Score: 81.6 bits (200), Expect = 2.620e-15
Identity = 38/59 (64.41%), Postives = 45/59 (76.27%), Query Frame = 1 
Query:    4 VSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQHPQDQVCVCVR 180
            V++WDGDNKK+L QL  YP  I++LAFS DGS+LAI SSYTFE+GEKQ P D   V  R
Sbjct:  242 VNVWDGDNKKKLCQLHQYPTSIASLAFSRDGSMLAIASSYTFEEGEKQSPPDDNVVLRR 300
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: A0A2P6TWI7_CHLSO (Mitotic checkpoint n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TWI7_CHLSO)

HSP 1 Score: 81.3 bits (199), Expect = 4.370e-15
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 1 
Query:    1 VVSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQHPQDQVCV 171
            VV+ WDG+NKKRLAQ+ GYP  ++ALAF+G  + LA+ +SYTFE GEK+HP D + +
Sbjct:  263 VVNFWDGENKKRLAQIAGYPTSVAALAFNGAATQLAVAASYTFEQGEKEHPADAIFI 319
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: A0A087SRU2_AUXPR (Mitotic checkpoint protein BUB3 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SRU2_AUXPR)

HSP 1 Score: 81.3 bits (199), Expect = 4.450e-15
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1 
Query:    1 VVSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQHPQDQVCV 171
            VVSIWDG++KKRLAQ TGYP  I+ALAF+  G+LLA+ SSYTFE G+ +HP D + +
Sbjct:  265 VVSIWDGEHKKRLAQFTGYPTSIAALAFNLAGNLLAVASSYTFEKGDIEHPADSIYI 321
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: A0A388M7M3_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M7M3_CHABU)

HSP 1 Score: 80.9 bits (198), Expect = 6.040e-15
Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 1 
Query:    4 VSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQHPQDQVCVC-VRERESWPALFPF 213
            V++WDG NKKRL Q   YP  I+AL+FS DG LLA+ SSYTFE+GEK HP DQ+ +  V E E  P   P+
Sbjct:  263 VNVWDGTNKKRLYQYQKYPTSIAALSFSRDGRLLAVASSYTFEEGEKVHPPDQIFIRNVNELEVKPKPRPY 333
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BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Match: A0A7S2HTA8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HTA8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.370e-15
Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = 1 
Query:    4 VSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQHPQDQVCV 171
            V++WDG NKKRL QL  YP  I++L+F+ DG++LA+ SSYTFE+GEK HP DQ+ +
Sbjct:  254 VNVWDGRNKKRLCQLPSYPTSIASLSFNRDGTMLAVASSYTFEEGEKDHPPDQLFI 309
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8238.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1S8VH12_9FUNG1.010e-1753.52Mitotic checkpoint protein (Fragment) n=1 Tax=Batr... [more]
A0A6T7WF00_9CHLO1.650e-1657.53Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A1S8VTD6_9FUNG1.240e-1553.52Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
A0A1Y1XYZ8_9FUNG1.630e-1550.00Mitotic checkpoint protein BUB3-like protein n=1 T... [more]
M2WS12_GALSU1.820e-1557.14Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A812W6H0_SYMMI2.620e-1564.41BUB3.1 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A2P6TWI7_CHLSO4.370e-1557.89Mitotic checkpoint n=1 Tax=Chlorella sorokiniana T... [more]
A0A087SRU2_AUXPR4.450e-1563.16Mitotic checkpoint protein BUB3 n=2 Tax=Auxenochlo... [more]
A0A388M7M3_CHABU6.040e-1556.34Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A7S2HTA8_9STRA7.370e-1558.93Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8238contigP-wetherbeei_contig8238:75..592 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog130081.XP_005703150.1
Preferred nameBUB3
PFAMsWD40
Model size518
Max annot lvl2759|Eukaryota
KEGG koko:K02180,ko:K04532,ko:K14298
KEGG TC1.I.1
KEGG Pathwayko03013,ko04110,ko04111,ko05010,ko05164,ko05166,map03013,map04110,map04111,map05010,map05164,map05166
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000793,GO:0000794,GO:0000819,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007088,GO:0007093,GO:0007094,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0008608,GO:0009056,GO:0009057,GO:0009790,GO:0009792,GO:0009987,GO:0010498,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0016043,GO:0019538,GO:0019941,GO:0022402,GO:0022414,GO:0023052,GO:0030071,GO:0030163,GO:0031145,GO:0031570,GO:0031577,GO:0031974,GO:0031981,GO:0032182,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033313,GO:0033316,GO:0033597,GO:0034613,GO:0035556,GO:0040020,GO:0043130,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044774,GO:0044779,GO:0045786,GO:0045835,GO:0045839,GO:0045841,GO:0045930,GO:0048285,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051179,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051603,GO:0051641,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0065007,GO:0070013,GO:0070727,GO:0071173,GO:0071174,GO:0071704,GO:0071840,GO:0072395,GO:0072413,GO:0072416,GO:0072477,GO:0072480,GO:0072486,GO:0098687,GO:0098813,GO:0140014,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1901993,GO:1901994,GO:1902099,GO:1902100,GO:1902102,GO:1902103,GO:1903046,GO:1903047,GO:1905132,GO:1905133,GO:1905818,GO:1905819,GO:1990298,GO:2000241,GO:2000242,GO:2000816,GO:2001251
Exons1
Evalue1.01e-16
EggNOG OGsKOG1036@1|root,KOG1036@2759|Eukaryota
Descriptionspindle assembly checkpoint
Cds size411
COG categoryS
BRITEko00000,ko00001,ko00002,ko03019,ko03036,ko03041,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187028.5409172-CDS-P-wetherbeei_contig8238:74..4851683187028.5409172-CDS-P-wetherbeei_contig8238:74..485Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8238 75..485 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187028.553174-UTR-P-wetherbeei_contig8238:485..5921683187028.553174-UTR-P-wetherbeei_contig8238:485..592Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8238 486..592 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8238.2.1prot_P-wetherbeei_contig8238.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8238 75..485 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8238.2.1

>prot_P-wetherbeei_contig8238.2.1 ID=prot_P-wetherbeei_contig8238.2.1|Name=mRNA_P-wetherbeei_contig8238.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp
VVSIWDGDNKKRLAQLTGYPAGISALAFSGDGSLLAIGSSYTFEDGEKQH
PQDQVCVCVRERESWPALFPFPSENRADFFAQRAENGRVGLGSRALWGLT
SAARKRVLDSTASLRDSSFRNPQSHTHYPLPLLLFA*
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mRNA from alignment at P-wetherbeei_contig8238:75..592+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8238.2.1 ID=mRNA_P-wetherbeei_contig8238.2.1|Name=mRNA_P-wetherbeei_contig8238.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=518bp|location=Sequence derived from alignment at P-wetherbeei_contig8238:75..592+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGTGAGCATTTGGGATGGGGACAACAAGAAGCGGCTGGCGCAGCTGAC
GGGCTACCCGGCCGGCATCTCGGCGCTCGCCTTCAGCGGCGACGGCTCAC
TGCTCGCCATTGGTTCGTCCTACACCTTCGAGGACGGCGAGAAGCAGCAC
CCCCAGGACCAGGTCTGTGTGTGTGTGAGAGAGAGAGAGAGTTGGCCGGC
TTTGTTTCCTTTCCCTTCGGAGAACCGGGCCGACTTCTTCGCCCAGCGAG
CCGAAAACGGGAGAGTTGGTCTTGGGTCTCGCGCACTTTGGGGTCTTACG
TCTGCGGCACGAAAACGTGTTTTGGACTCTACCGCAAGCTTGAGGGACTC
AAGCTTTCGAAATCCCCAGAGCCACACGCACTACCCGTTGCCGCTGCTGC
TGTTCGCATGAAAACTCCACCAACTCGTGACTTTCATGTCCATAGCCCCT
CCCAGTTTTTGTCCTTCCCAGTTTTGCTCGTGCTTGTGCTGAGATAATGG
TCCGGGTGCCGCTCAGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8238:75..592+

>mRNA_P-wetherbeei_contig8238.2.1 ID=mRNA_P-wetherbeei_contig8238.2.1|Name=mRNA_P-wetherbeei_contig8238.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig8238:75..592+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGTGAGCATTTGGGATGGGGACAACAAGAAGCGGCTGGCGCAGCTGAC
GGGCTACCCGGCCGGCATCTCGGCGCTCGCCTTCAGCGGCGACGGCTCAC
TGCTCGCCATTGGTTCGTCCTACACCTTCGAGGACGGCGAGAAGCAGCAC
CCCCAGGACCAGGTCTGTGTGTGTGTGAGAGAGAGAGAGAGTTGGCCGGC
TTTGTTTCCTTTCCCTTCGGAGAACCGGGCCGACTTCTTCGCCCAGCGAG
CCGAAAACGGGAGAGTTGGTCTTGGGTCTCGCGCACTTTGGGGTCTTACG
TCTGCGGCACGAAAACGTGTTTTGGACTCTACCGCAAGCTTGAGGGACTC
AAGCTTTCGAAATCCCCAGAGCCACACGCACTACCCGTTGCCGCTGCTGC
TGTTCGCATGA
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