mRNA_P-wetherbeei_contig8220.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8220.2.1
Unique NamemRNA_P-wetherbeei_contig8220.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: A0A6N7GSU3_9HYPH (Aryl-sulfate sulfotransferase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GSU3_9HYPH)

HSP 1 Score: 97.8 bits (242), Expect = 4.760e-25
Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS VIKRSIVI GH+TSVSLEDAFW+GLKDIA  R + +S++V AIDGERQ+ NLSSAIRLFV  ++
Sbjct:    1 MKSPVIKRSIVIAGHKTSVSLEDAFWKGLKDIAGGRDMTLSEVVAAIDGERQHGNLSSAIRLFVLDYY 68
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BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: A0A6N7GMJ8_9HYPH (Aryl-sulfate sulfotransferase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GMJ8_9HYPH)

HSP 1 Score: 97.1 bits (240), Expect = 9.880e-25
Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS VIKRSIVI GH+TSVSLEDAFW+GLKDIA +R + +S++V AID ER++ NLSSAIRLFV  H+
Sbjct:    1 MKSPVIKRSIVIAGHKTSVSLEDAFWKGLKDIAGSRDMTLSELVAAIDSERRHGNLSSAIRLFVLDHY 68
[Close]
BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: A0A6L5FN34_9HYPH (Aryl-sulfate sulfotransferase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FN34_9HYPH)

HSP 1 Score: 96.3 bits (238), Expect = 1.880e-24
Identity = 44/68 (64.71%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS+V+KRSIVI GH+TSVSLEDAFW+ LK+IAR R + +SD+V +ID +R++ NLSSAIRLFV  H+
Sbjct:    1 MKSQVVKRSIVIAGHKTSVSLEDAFWQSLKEIARQRDITLSDLVASIDSDRRHGNLSSAIRLFVLDHY 68
[Close]
BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: A0A127F138_9HYPH (Arylsulfate sulfotransferase-like protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F138_9HYPH)

HSP 1 Score: 94.7 bits (234), Expect = 8.100e-24
Identity = 46/68 (67.65%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS VIKRSIVI GH+TSVSLEDAFW+GLK+IA  RS+ +SD+V +ID +R++ NLSSAIRLFV  H+
Sbjct:    1 MKSPVIKRSIVIAGHKTSVSLEDAFWQGLKEIADERSMTLSDLVSSIDTDRRHGNLSSAIRLFVLDHY 68
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BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: A0A537SVA3_9PROT (Ribbon-helix-helix domain-containing protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SVA3_9PROT)

HSP 1 Score: 94.4 bits (233), Expect = 1.030e-23
Identity = 46/68 (67.65%), Postives = 56/68 (82.35%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS V+KRSIVI GH+TSVSLEDAFW+GLK+IA  R + +SD+V AID ERQ+ NLSSAIRLFV   +
Sbjct:    1 MKSPVVKRSIVIAGHKTSVSLEDAFWKGLKEIANGRDMTLSDLVAAIDSERQHGNLSSAIRLFVLDFY 68
[Close]
BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: J9DWY7_9RHOB (RHH_4 domain-containing protein n=2 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J9DWY7_9RHOB)

HSP 1 Score: 94.4 bits (233), Expect = 1.120e-23
Identity = 46/68 (67.65%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS V+KRSIVI GH+TSVSLEDAFW+ LK+IA  R V +SD+V  ID ER++ NLSSAIRLFV  HF
Sbjct:    1 MKSPVVKRSIVIAGHKTSVSLEDAFWKALKEIAAARHVTLSDLVSTIDSERRHGNLSSAIRLFVLDHF 68
[Close]
BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: A0A1Q7B8J4_9PROT (Aryl-sulfate sulfotransferase n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7B8J4_9PROT)

HSP 1 Score: 93.6 bits (231), Expect = 2.070e-23
Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS V+KRSIVI GH+TSVSLEDAFW+GLK+IA  R++ +S++V AID ERQ+ NLSSAIRLFV   +
Sbjct:    1 MKSPVVKRSIVIAGHKTSVSLEDAFWKGLKEIASARNMTLSELVAAIDSERQHGNLSSAIRLFVLDFY 68
[Close]
BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: A0A327JQX0_9HYPH (Aryl-sulfate sulfotransferase n=1 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327JQX0_9HYPH)

HSP 1 Score: 93.2 bits (230), Expect = 3.030e-23
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS V+KRSIVI GH+TSVSLEDAFW+ LK+IA  R V +SD+V  ID ER++ NLSSAIRLFV  H+
Sbjct:    1 MKSPVVKRSIVIAGHKTSVSLEDAFWKALKEIAAARHVTLSDLVSTIDSERRHGNLSSAIRLFVLEHY 68
[Close]
BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: A0A327K8M3_9HYPH (Aryl-sulfate sulfotransferase n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327K8M3_9HYPH)

HSP 1 Score: 93.2 bits (230), Expect = 3.110e-23
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS V+KRSIVI GH+TSVSLEDAFW+ LK+IA  R V +SD+V  ID ER++ NLSSAIRLFV  H+
Sbjct:    1 MKSPVVKRSIVIAGHKTSVSLEDAFWKALKEIASARHVTLSDLVSTIDSERRHGNLSSAIRLFVLDHY 68
[Close]
BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Match: A0A327KY12_9HYPH (Aryl-sulfate sulfotransferase n=2 Tax=Rhodoplanes TaxID=29407 RepID=A0A327KY12_9HYPH)

HSP 1 Score: 92.8 bits (229), Expect = 4.420e-23
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:    1 LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGERQYCNLSSAIRLFVFSHF 204
            +KS V+KRSIVI GH+TSVSLEDAFW+ LK+IA  R V +SD+V  ID ER++ NLSSAIRLFV  H+
Sbjct:    1 MKSPVVKRSIVIAGHKTSVSLEDAFWKALKEIAGARHVTLSDLVSTIDSERRHGNLSSAIRLFVLDHY 68
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8220.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7GSU3_9HYPH4.760e-2570.59Aryl-sulfate sulfotransferase n=1 Tax=Hyphomicrobi... [more]
A0A6N7GMJ8_9HYPH9.880e-2569.12Aryl-sulfate sulfotransferase n=1 Tax=Hyphomicrobi... [more]
A0A6L5FN34_9HYPH1.880e-2464.71Aryl-sulfate sulfotransferase n=1 Tax=Hyphomicrobi... [more]
A0A127F138_9HYPH8.100e-2467.65Arylsulfate sulfotransferase-like protein n=1 Tax=... [more]
A0A537SVA3_9PROT1.030e-2367.65Ribbon-helix-helix domain-containing protein n=2 T... [more]
J9DWY7_9RHOB1.120e-2367.65RHH_4 domain-containing protein n=2 Tax=Rhodovulum... [more]
A0A1Q7B8J4_9PROT2.070e-2366.18Aryl-sulfate sulfotransferase n=1 Tax=Alphaproteob... [more]
A0A327JQX0_9HYPH3.030e-2366.18Aryl-sulfate sulfotransferase n=1 Tax=Rhodoplanes ... [more]
A0A327K8M3_9HYPH3.110e-2366.18Aryl-sulfate sulfotransferase n=1 Tax=Rhodoplanes ... [more]
A0A327KY12_9HYPH4.420e-2366.18Aryl-sulfate sulfotransferase n=2 Tax=Rhodoplanes ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8220contigP-wetherbeei_contig8220:1842..2054 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1187851.A33M_1125
Preferred nameMA20_02235
PFAMsRHH_4
Model size213
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.83e-24
EggNOG OGsCOG4321@1|root,COG4321@2|Bacteria,1N7Z2@1224|Proteobacteria,2UF7W@28211|Alphaproteobacteria,3FDI9@34008|Rhodovulum
DescriptionRibbon-helix-helix domain
Cds size213
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187027.3766303-CDS-P-wetherbeei_contig8220:1841..20541683187027.3766303-CDS-P-wetherbeei_contig8220:1841..2054Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8220 1842..2054 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8220.2.1prot_P-wetherbeei_contig8220.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8220 1842..2054 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8220.2.1

>prot_P-wetherbeei_contig8220.2.1 ID=prot_P-wetherbeei_contig8220.2.1|Name=mRNA_P-wetherbeei_contig8220.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp
LKSRVIKRSIVIGGHRTSVSLEDAFWEGLKDIARTRSVHISDIVCAIDGE
RQYCNLSSAIRLFVFSHFHK*
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mRNA from alignment at P-wetherbeei_contig8220:1842..2054-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8220.2.1 ID=mRNA_P-wetherbeei_contig8220.2.1|Name=mRNA_P-wetherbeei_contig8220.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig8220:1842..2054- (Phaeothamnion wetherbeei SAG_119_79)
CTGAAATCCCGTGTGATCAAGCGGTCGATTGTGATTGGGGGCCACCGGAC
CAGTGTCAGTCTCGAGGATGCCTTCTGGGAAGGCCTGAAGGACATCGCGC
GAACGCGCAGCGTGCATATTTCGGATATTGTTTGCGCCATTGATGGCGAG
CGCCAGTACTGCAATCTGTCGTCGGCGATCCGCCTCTTCGTATTCTCCCA
TTTCCACAAATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8220:1842..2054-

>mRNA_P-wetherbeei_contig8220.2.1 ID=mRNA_P-wetherbeei_contig8220.2.1|Name=mRNA_P-wetherbeei_contig8220.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig8220:1842..2054- (Phaeothamnion wetherbeei SAG_119_79)
CTGAAATCCCGTGTGATCAAGCGGTCGATTGTGATTGGGGGCCACCGGAC
CAGTGTCAGTCTCGAGGATGCCTTCTGGGAAGGCCTGAAGGACATCGCGC
GAACGCGCAGCGTGCATATTTCGGATATTGTTTGCGCCATTGATGGCGAG
CGCCAGTACTGCAATCTGTCGTCGGCGATCCGCCTCTTCGTATTCTCCCA
TTTCCACAAATAA
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