mRNA_P-wetherbeei_contig8204.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8204.3.1
Unique NamemRNA_P-wetherbeei_contig8204.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: D8LRL3_ECTSI (Sulfate adenylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL3_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.060e-32
Identity = 63/71 (88.73%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:    1 ANSEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLREA 213
            ANSEELGV+CVPSLNLVYTEEEGYVTAD AEE +LTKKSLSGTKFR+MLRGG+DIPEWFAFKSVV VLR A
Sbjct:  378 ANSEELGVKCVPSLNLVYTEEEGYVTADVAEEKSLTKKSLSGTKFRQMLRGGEDIPEWFAFKSVVDVLRSA 448
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BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: A0A7S2GMQ8_9STRA (Sulfate adenylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GMQ8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.960e-29
Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 1 
Query:    1 ANSEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLREAI 216
            + S ELGV CVPSLNLVYTEEEGYVTAD AEE +L+ K LSGTKFRKMLRGG+DIPEWFAFKSVV VLRE +
Sbjct:  348 SKSAELGVVCVPSLNLVYTEEEGYVTADVAEEKSLSMKKLSGTKFRKMLRGGEDIPEWFAFKSVVKVLRENV 419
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BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: A0A7S2Z0H3_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z0H3_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 7.990e-29
Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 1 
Query:    7 SEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLRE 210
            S+ELGV  VPSLN+VYTEEEGYVTAD A E NL  K LSGTKFR+MLR G+DIPEWFAFKSVV+VLRE
Sbjct:   30 SKELGVDTVPSLNIVYTEEEGYVTADVASEKNLHIKKLSGTKFRQMLRAGEDIPEWFAFKSVVSVLRE 97
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BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: A0A0D2MGY6_9CHLO (Sulfate adenylyltransferase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MGY6_9CHLO)

HSP 1 Score: 108 bits (271), Expect = 2.020e-28
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 1 
Query:    4 NSEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLREAIEAEA 228
            N+ ELG+  VPSLN+ YT+E+GYVTAD A+   LT  SLSGTKFR+MLRGGDDIPEWFAFKSVV VLRE+++ EA
Sbjct:   95 NAAELGMDTVPSLNIAYTQEKGYVTADVAKAEGLTTLSLSGTKFRQMLRGGDDIPEWFAFKSVVQVLRESVQTEA 169
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BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: A0A7S2Z0T5_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z0T5_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 4.500e-28
Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 1 
Query:    7 SEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLRE 210
            S+ELGV  VPSLN+VYTEEEGYVTAD A E NL  K LSGTKFR+MLR G+DIPEWFAFKSVV+VLRE
Sbjct:   91 SKELGVDTVPSLNIVYTEEEGYVTADVASEKNLHIKKLSGTKFRQMLRAGEDIPEWFAFKSVVSVLRE 158
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BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: K0T3U1_THAOC (Sulfate adenylyltransferase n=3 Tax=Thalassiosira TaxID=35127 RepID=K0T3U1_THAOC)

HSP 1 Score: 113 bits (282), Expect = 6.530e-28
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 1 
Query:    1 ANSEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLREAI 216
            A   ELGV  VPSLNLVYT+EEGYVTAD A+E NL++K LSGTKFRKMLRGG+DIPEWFAFKSVV VLRE +
Sbjct:  358 AKGPELGVTPVPSLNLVYTDEEGYVTADEAKEKNLSEKKLSGTKFRKMLRGGEDIPEWFAFKSVVKVLRENV 429
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BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: A0A448ZHX9_9STRA (Sulfate adenylyltransferase n=5 Tax=Bacillariaceae TaxID=33852 RepID=A0A448ZHX9_9STRA)

HSP 1 Score: 112 bits (281), Expect = 9.180e-28
Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = 1 
Query:    1 ANSEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLRE 210
            AN+E+LGV  VPSLNLVYTEEEGYVTAD A+E +L+ K LSGTKFR+MLRGG+DIPEWFAFKSVV VLRE
Sbjct:  359 ANAEKLGVTPVPSLNLVYTEEEGYVTADEAKEKDLSLKKLSGTKFRQMLRGGEDIPEWFAFKSVVEVLRE 428
[Close]
BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: A0A7S1H1K0_9STRA (Sulfate adenylyltransferase n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1K0_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.450e-27
Identity = 56/70 (80.00%), Postives = 61/70 (87.14%), Query Frame = 1 
Query:    1 ANSEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLRE 210
            AN+E+LGV  VPSLNLVY EEEGYVTAD AEE  L+ K LSGTKFR+MLRGG+DIPEWFAFKSVV VLRE
Sbjct:  229 ANAEKLGVTPVPSLNLVYCEEEGYVTADFAEEKGLSIKKLSGTKFRQMLRGGEDIPEWFAFKSVVKVLRE 298
[Close]
BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: A0A2P6VFU4_9CHLO (Sulfate adenylyltransferase n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFU4_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 1.460e-27
Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 1 
Query:    1 ANSEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLREAIEAEAA 231
            AN+ ELG+Q VPSLN+ YTEE+GYVTAD AE+  L K +LSGTKFRKMLR G+DIPEWFAFKSVV+VLREAI  E+A
Sbjct:  401 ANAPELGMQTVPSLNITYTEEKGYVTADVAEKEGLHKLNLSGTKFRKMLRAGEDIPEWFAFKSVVSVLREAIAEESA 477
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BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Match: A0A7S0EPR6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EPR6_9EUKA)

HSP 1 Score: 107 bits (267), Expect = 1.520e-27
Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = 1 
Query:    1 ANSEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLRGGDDIPEWFAFKSVVAVLR 207
            AN++ELGVQ VPSLNLVYTEE  YVTAD A+E N   K LSGTKFR+MLR G++IPEWFAFKSVVAVLR
Sbjct:  121 ANADELGVQAVPSLNLVYTEEADYVTADEAKEKNYNLKKLSGTKFRQMLRAGEEIPEWFAFKSVVAVLR 189
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8204.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRL3_ECTSI1.060e-3288.73Sulfate adenylyltransferase n=1 Tax=Ectocarpus sil... [more]
A0A7S2GMQ8_9STRA2.960e-2980.56Sulfate adenylyltransferase n=1 Tax=Dictyocha spec... [more]
A0A7S2Z0H3_9CHLO7.990e-2979.41Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
A0A0D2MGY6_9CHLO2.020e-2870.67Sulfate adenylyltransferase n=1 Tax=Monoraphidium ... [more]
A0A7S2Z0T5_9CHLO4.500e-2879.41Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
K0T3U1_THAOC6.530e-2877.78Sulfate adenylyltransferase n=3 Tax=Thalassiosira ... [more]
A0A448ZHX9_9STRA9.180e-2880.00Sulfate adenylyltransferase n=5 Tax=Bacillariaceae... [more]
A0A7S1H1K0_9STRA1.450e-2780.00Sulfate adenylyltransferase n=1 Tax=Thalassionema ... [more]
A0A2P6VFU4_9CHLO1.460e-2774.03Sulfate adenylyltransferase n=2 Tax=Micractinium c... [more]
A0A7S0EPR6_9EUKA1.520e-2776.81Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8204contigP-wetherbeei_contig8204:2345..2830 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LRL3
Preferred nameMET3
PFAMsAPS_kinase,ATP-sulfurylase,PUA_2
Model size240
Max annot lvl2759|Eukaryota
KEGG rclassRC02809,RC02889
KEGG koko:K00958
KEGG ReactionR00529,R04929
KEGG Pathwayko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130
KEGG ModuleM00176,M00596
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000103,GO:0003674,GO:0003824,GO:0004779,GO:0004781,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010134,GO:0016740,GO:0016772,GO:0016779,GO:0019379,GO:0019419,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0070566,GO:0071704,GO:1901564
Exons2
Evalue1.73e-33
EggNOG OGsCOG2046@1|root,KOG0636@2759|Eukaryota
EC2.7.7.4
Descriptionsulfate adenylyltransferase (ATP) activity
Cds size240
COG categoryP
BiGG ReactioniRC1080.CRv4_Au5_s3_g11218_t1
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187025.990617-CDS-P-wetherbeei_contig8204:2344..24601683187025.990617-CDS-P-wetherbeei_contig8204:2344..2460Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8204 2345..2460 -
1683187026.0004902-CDS-P-wetherbeei_contig8204:2706..28301683187026.0004902-CDS-P-wetherbeei_contig8204:2706..2830Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8204 2707..2830 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8204.3.1prot_P-wetherbeei_contig8204.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8204 2345..2830 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8204.3.1

>prot_P-wetherbeei_contig8204.3.1 ID=prot_P-wetherbeei_contig8204.3.1|Name=mRNA_P-wetherbeei_contig8204.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=80bp
ANSEELGVQCVPSLNLVYTEEEGYVTADRAEEVNLTKKSLSGTKFRKMLR
GGDDIPEWFAFKSVVAVLREAIEAEAAQA*
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mRNA from alignment at P-wetherbeei_contig8204:2345..2830-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8204.3.1 ID=mRNA_P-wetherbeei_contig8204.3.1|Name=mRNA_P-wetherbeei_contig8204.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig8204:2345..2830- (Phaeothamnion wetherbeei SAG_119_79)
GCTAACTCGGAGGAGCTGGGCGTGCAGTGCGTGCCGTCGCTGAACCTGGT
GTACACGGAGGAGGAAGGATACGTCACGGCTGACCGCGCCGAGGAGGTCA
ACCTCACCAAGAAGTCCCTCTCTGGTGAGTCACTGACGAGGATTAGTCAG
GCAGTTCATTCTCGGTTCAACCTGTCTCGAAAAAGGAAGCGGTGAGTGTA
TTGGCGTGCTCTTTCTCCCGTCGTGACGGAGTGGATGGGATGATGAGTGT
CACTTTTTGTTCTCAGATAATAACCCTGCGGCGGTTTTCCAGCTTGTCGC
TTCTCCTCCTGTCTTTCTTCGCGTTCCACTTCTGAGCTTTGTTTTCTCTA
AATCGGCAAAACTGAAACAGGAACCAAGTTTCGCAAGATGCTGCGGGGCG
GCGACGACATTCCCGAGTGGTTCGCCTTTAAGTCCGTTGTGGCCGTCCTG
CGGGAAGCCATCGAGGCGGAGGCGGCGCAGGCGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8204:2345..2830-

>mRNA_P-wetherbeei_contig8204.3.1 ID=mRNA_P-wetherbeei_contig8204.3.1|Name=mRNA_P-wetherbeei_contig8204.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig8204:2345..2830- (Phaeothamnion wetherbeei SAG_119_79)
GCTAACTCGGAGGAGCTGGGCGTGCAGTGCGTGCCGTCGCTGAACCTGGT
GTACACGGAGGAGGAAGGATACGTCACGGCTGACCGCGCCGAGGAGGTCA
ACCTCACCAAGAAGTCCCTCTCTGGAACCAAGTTTCGCAAGATGCTGCGG
GGCGGCGACGACATTCCCGAGTGGTTCGCCTTTAAGTCCGTTGTGGCCGT
CCTGCGGGAAGCCATCGAGGCGGAGGCGGCGCAGGCGTAA
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