mRNA_P-wetherbeei_contig820.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig820.1.1
Unique NamemRNA_P-wetherbeei_contig820.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.910e-48
Identity = 133/396 (33.59%), Postives = 201/396 (50.76%), Query Frame = 1
Query:   10 PPXXXKREQGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDEVEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIREKGRTGYRIAIALLTH--------FLGQEALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAV-------------EGEAAAPEAVAAAAFAGEMAAFGPTSLADQSAS--LRRGDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYFNVA-TARAGPPPRLREGADVEFWVVDDTAKDGRPSLRALGVVVLPRGSV 1125
            P    +REQGRV +++E FGF++C DRPGDLFFHL+ AP  I++GDEV+F +G  +RS ++CA  + +LPPGT+  E  +   F GV++RD+R+         R +  G R RP  +    ++G+IK+                G  P  D  A           +  A  T         F  + A+   D+                 S PA + +   AV             +G+ AAP  +      G M  +  T   ++ A    RRGDEV F++ Q K +GRKRA ++ +VR++R++++ EQ + L E+GA +++G+V ++  DYGF+R     E +YFN A   ++    RLR G+  EFWVV D  KD R S RAL + VLP G++
Sbjct:  152 PEAGGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSHPSSMPSTHRANMMG-RSRP--QESQQSEGLIKIT---------------GAAPPEDPPAASDTTAPPEREVQPADATEGGDGTDTSFETEAAVAGVDDA-------------AGTSAPAATPETEEAVAVRSTQPAPAGDGKGDRAAPLGLQ-----GAMVTYLVTDSLEEDAGSRFRRGDEVRFKVSQEKVTGRKRAVELVLVRTNREKREGEQLQKLIESGATKQQGVVKKLTHDYGFLRSLSCPETVYFNTAHVVQSREGERLRVGSQAEFWVVPDRTKDRRESFRALEIKVLPPGTL 511          
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 8.450e-47
Identity = 128/387 (33.07%), Postives = 199/387 (51.42%), Query Frame = 1
Query:   10 PPXXXKREQGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDEVEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIRE---------KGRTGYRIAIALLTHFLGQE---ALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSAS--LRRGDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYFNVA-TARAGPPPRLREGADVEFWVVDDTAKDGRPSLRALGVVVLPRGSV 1125
            P    +REQGRV +++E FGF++C DRPGDLFFHL+ AP  I++GDEV+F +G  +RS ++CA  + +LPPGT+  E  +   F GV++RD+R+         R +  G R RP  +    ++G+IK+                 ++P  D      E         +G  G              E   A+   D+    +           V+  +     A   +G+ AAP  +      G M  +  T   ++ A    RRGDEV F++ Q K +GRKRA +V +VR++R++++ EQ + L ++GA +++G+V ++  DYGF+R     E +YFN A   ++    RLR G+  EFWVV D  KD R S RAL + +LP G++
Sbjct:  153 PEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMG-RSRP--QEYQQSEGLIKI-----------TGAAPPEEPAADDTTAPPEGEVQPADATEGGDGTXXXXXXXXXXXSPETEAAVAGVDDAAGTSAPAXXXXXXXXVAVRSTQPTLAGDDKGDTAAPLGLQ-----GAMVTYLVTDGLEEDAGSRFRRGDEVRFKVSQEKVTGRKRAVEVVLVRTNREKREGEQLQKLIDSGATKQQGVVKKLTHDYGFLRSLSCPETVYFNTAHLVQSREGERLRVGSQAEFWVVPDRTKDRRESFRALEIKILPPGTL 520          
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: A0A6A4EEB2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EEB2_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.050e-25
Identity = 115/404 (28.47%), Postives = 164/404 (40.59%), Query Frame = 1
Query:   31 EQGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDEVEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGAD----GVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIREKGRTGYRIAIALLTHFLGQEALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSASLRR------GDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYF---------------------NVAT-----ARAGPPPRLREGADVEFWVVDDTAKDG---RPSLRALGVVVLPRGSV 1125
            +QG V ++RE FGF+ C +R GDLFFH+S AP G+ + DEVEF V  + RS +E A  +  LP GTI+ E     +  GVV + L    + GG          RG   GR DD       G+I+V++                    +    +        + A A L     +  ++ F+                     AL +D                                 +QS   +R      GD+V FR+ +H+ +G KRA D+ +  S+R++ ++E E  L  A   RE G+V R+    GFI+  DR   +YF                     + AT      R G  P LREG +V F+V +D   D    RP L AL V  LP GSV
Sbjct:  178 QQGFVVSIRENFGFVSCLERDGDLFFHMSEAPVGVQLQDEVEFRVKLNQRSDKEMACQLVALPKGTIQVEELSDELVDGVVTKSLPRGGHAGG----------RGFFNGRDDDRHQREEHGLIEVKR--------------------EAETEVEAAAEQTEQEADAPLKKTRARREIVRFNS-----------------ESVALVED-----------------------------KDEQEQSGRPKRNPIPHFGDQVRFRIAKHRKTGAKRAVDITITVSAREKLEKEMEAKL--ATMTREMGVVDRVKNGGGFIKCCDRPVDIYFPFHEIREPEGGDTSDIKDGEQSEATDKPRRGRQGKGPTLREGDEVSFFVYEDQEDDSARSRPRLTALRVQKLPAGSV 503          
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: A0A329RLV6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RLV6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.550e-25
Identity = 106/388 (27.32%), Postives = 150/388 (38.66%), Query Frame = 1
Query:   31 EQGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDEVEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIREKGRTGYRIAIALLTHFLGQE-ALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSASLRRGDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYF-------------------NVATARAGPPPRLREGADVEFWVVDDTAKDG---RPSLRALGVVVLPRGSV 1125
            EQG + +++E FGF+ C  R GDLFFH+S AP  + + DEVEF V ++ RS +E A  +  LP GTI+ E      + GVV + L    +GGG                RG                 I    S  +G+ P            +    +A      F G+  A +  D+                   P  SK                                   ++     GDEV FR+ +H+ +G KRA D+ +  S+R++ D+E E  L  A   RE G+V R+    GFI+  DR   +YF                        R G  P + EG +V F+V +D   D    RP L AL V  LP G+V
Sbjct:  178 EQGFIVSIKENFGFVSCMGRDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSEEFYDGVVTKSLPRGGHGGG----------------RGXXXXXXXXXXXXXXHGLIEVKKSETEGENPTXXXXXXXXXXXKK--TLARREFVRFTGESVAAIESDQ-----------------EQPGRSK-----------------------------------KNLIPHFGDEVRFRIAKHRKTGAKRAVDITITVSAREKLDKEIEAKL--ATMTRETGVVDRVKNGGGFIKCCDRPVDVYFPFHEIRESEEHEKETESEDKSRHGRQGKAPSIHEGVEVSFFVYEDHEDDSGRSRPRLTALRVQKLPPGTV 493          
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: G4Z9V3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9V3_PHYSP)

HSP 1 Score: 115 bits (287), Expect = 3.800e-24
Identity = 109/394 (27.66%), Postives = 165/394 (41.88%), Query Frame = 1
Query:   31 EQGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDEVEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIREKGRTGYRIAIALLTHFLGQEALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSASLRRGDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYFNVATARAGPP--------------------------PRLREGADVEFWVVDDTAKDG---RPSLRALGVVVLPRGSV 1125
            +QG V +++E FGF+ C +R GDLFFH+S AP  + + DEVEF V ++ RS +E A  +  LP GTI+ E     +F GVV + L    +GGG    N+R   R +          G+I+V++          +  +G+    +  A   ++ +T    A A     L +   + F+                         ++   +E                E      T    ++     GDEV FR+ +H+ +G KRA D+ +  S+R++ ++E E  L      RE G+V R+    GFI+  DR   +YF     R                              P LREG +V F+V +D   D    RP L AL V  LP GSV
Sbjct:  166 KQGFVVSIKENFGFVSCLERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSDELFDGVVTKSLPRGGHGGGRGFFNNRDDDRHQRE------EHGLIEVKK----------APEQGEDAKAEETAATGDEEQTQEE-ADASPKKTLARREFVRFNS------------------------ESVAVIE----------------EKDDQEQTGRPKKNPIPHFGDEVRFRIAKHRKTGAKRAVDIIITVSAREKLEKEIEAKLETMT--RETGVVDRVKNGGGFIKCCDRPVDVYFPFHEIREPEEXXXXXXXXXXXXXXXXXXXXXXXXKGPTLREGDEVSFFVYEDQEDDSARSRPRLTALRVQKLPPGSV 500          
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: W2QJD1_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QJD1_PHYPN)

HSP 1 Score: 113 bits (283), Expect = 1.230e-23
Identity = 107/390 (27.44%), Postives = 160/390 (41.03%), Query Frame = 1
Query:   31 EQGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDEVEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIREKGRTGYRIAIALLTHFLGQEALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSASLRRGDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYF----------------NVATARAGPP------PRLREGADVEFWVVDDTAKDG---RPSLRALGVVVLPRGSV 1125
            EQG + +++E FGF+ C +R GDLFFH+S AP  + + DEVEF V ++ RS +E A  +  LP GTI+ E        G+V + L   ++G G    N R   R R          G+I+V++          +  + + P T+ +    E       +    +  F  +    N D+                   P  SK                                   ++     GDEV FR+ +H+ +G KRA D+ +  S+R++ D+E +  L  A   RE G+V R+    GFI+  DR   +YF                 V T     P      P +REG +V F+V +D   D    RP L AL V  LP G+V
Sbjct:  169 EQGFIVSIKENFGFVSCMERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIKVEEVSEEYCDGIVTKSL--PRHGSGRGFFNSRDDDRRREE-------HGLIEVKK----------NETEDENPKTEEQEQTEEDADKKPLVRREFV-RFTSESVAANDDDQ----------------EQPGRSK-----------------------------------KNPIPHFGDEVRFRIAKHRKTGAKRAVDITITVSAREKLDKEIKAKL--ATMTRETGVVDRVKNGGGFIKCCDRPVDVYFPFHELRESEDEKNDKKEVETEDKSRPGRQTKGPSIREGDEVSFFVYEDQEDDSGRSRPRLTALRVQKLPPGTV 485          
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: H3GWZ1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWZ1_PHYRM)

HSP 1 Score: 113 bits (282), Expect = 1.690e-23
Identity = 111/389 (28.53%), Postives = 163/389 (41.90%), Query Frame = 1
Query:   34 QGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDEVEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIREKGRTGYRIAIALLTHFLGQEALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSASLRRGDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYFNVATAR--------------AGPPPR--------LREGADVEFWVVDDTAKDG---RPSLRALGVVVLPRGSV 1125
            QG V +++E FGF+ C +R GDLFFH+S AP  + + DEVEF V ++ RS +E A  +  LP GTI+ E        GVV + L    +GGG    ND +  R        +   G+I++               + ++ + +G     +K R                                   R  V+ +  +++ DA T  EG+              E  +  P     +SA    GDEV FR+ +H+ +G KRA ++ V  S+R++ ++E E  L      RE GIV R+    GFI+  DR   +YF     R                  PR        +REG +V F+V +D   D    R  L AL V  LP GSV
Sbjct:  188 QGFVVSIKENFGFVSCMERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGTIQVEDVSDEFHDGVVTKSLPRGGHGGGRGFFNDDRHQR--------EEGHGLIEITTTQEGD--------EKEEQVQEGEDEATKKTRNK---------------------------------REFVRFNSDSVASDAKT--EGD--------------EQESGRPK----KSAIPHFGDEVHFRIAKHRKTGAKRAVEITVTTSAREKFEKEIEAKL--TTMTRENGIVDRVKNGGGFIKCCDRPMDVYFPFHEIREPEESDKNDDEQGEGSDKPRRGRQGKSVIREGDEVSFFVYEDQEDDSARPRSRLTALRVQKLPSGSV 505          
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: A0A662X4D1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4D1_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.400e-22
Identity = 112/401 (27.93%), Postives = 162/401 (40.40%), Query Frame = 1
Query:   31 EQGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDEVEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIREKGRTGYRIAIALLTHFLGQEALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSASLRRGDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYFNVATARAGPPPR---------------------------------LREGADVEFWVVDDTAKDG---RPSLRALGVVVLPRGSV 1125
            E+G V +++E FGF+ C +R GDLFFH++ AP  + + DEVEF V ++ RS +E A  +  LP GTI  E      F GVV + L      GG N  N       R   R  D   G+I+      +    +    +G +   +                 A     L +   + F+                   G   SK      +GE              +  + G    + +SA+   GDEV FR+ +H+ +G KRA ++ V  S+R + ++E E  L  A   RE G+V ++ G  GFI+  DR E +YF     R  P P                                  LREG +V F+V +D   D    RP L AL V  LP G+V
Sbjct:  293 ERGFVVSIKENFGFVSCMEREGDLFFHITEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVGLPKGTIVVEDVSEEFFDGVVTKSLPR----GGNNSYNSYNRDDTRHSQR--DEPHGLIEAVTPEENEGQDDSQEAEGDEAAKEQPEXXXXXXXXXXXXXXASPKKSLPKREFVRFNS---------------SSFGATDSK-----ADGEEQ------------QQGSGGHKGRSRKSATPHFGDEVRFRIAKHRKTGAKRAVEITVTVSARDKLEKEIEAKL--ATMTRENGVVAQMKGGGGFIKCCDRPEDVYFPFHEIREAPKPAKDQESDGKETKQAETGDKARRPSHGRQGKDAGSLREGDEVSFFVYEDQEDDSSRSRPHLTALRVQKLPAGTV 653          
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: D0NFB4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFB4_PHYIT)

HSP 1 Score: 109 bits (272), Expect = 3.280e-22
Identity = 99/398 (24.87%), Postives = 150/398 (37.69%), Query Frame = 1
Query:   31 EQGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDEVEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIREKGRTGYRIAIALLTHFLGQEALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSASLRR------GDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYF------------------------NVATARAGPPPRLREGADVEFWVVDDTAKDG---RPSLRALGVVVLPRGSV 1125
            EQG + +++E FGF+ C +R GDLFFH+S AP  + + DEVEF V ++ RS +E A  +  LP G+I+ E      + GVV + L    +G G    ++R               D      +  L  + ++ +  +                     +      HF  +    + D+                                                          +QSA  ++      GDEV FR+ +H+ +G KRA D+ +  S+R++ D+  E  L  A   RE G+V R+    GFI+  DR   +YF                             R    P +REG +V F+V +D   D    RP L AL V  LP GSV
Sbjct:  180 EQGFIVSIKENFGFVSCMERDGDLFFHISEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVALPKGSIKVEEVSDECYDGVVTKSLPRGGHGSGRGFFHNR---------------DDXXXXEEHGLIEVKRSETGEENTXXXXXXXXXXXXXXXXXKTLVRREFVHFTAESVAASEDDQ---------------------------------------------------------EQSARPKKNLIPHFGDEVRFRIARHRKTGAKRAVDITITASAREKLDKAIEAKL--ATMTRETGVVDRVKNGGGFIKCCDRPVDVYFPFHEIRESEEAEKSDKKLETDTEDKSRPGRQAKGPSMREGDEVSFFVYEDNEDDSGRSRPRLTALRVQKLPPGSV 503          
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Match: B7FZZ4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FZZ4_PHATC)

HSP 1 Score: 108 bits (270), Expect = 5.870e-22
Identity = 110/388 (28.35%), Postives = 173/388 (44.59%), Query Frame = 1
Query:   31 EQGRVATLREQFGFIQCCDRPGDLFFHLSVA------PDGISIGDEVEFVVGHSDRSTRECAS-DVAVLPPGTIRFEAE-IPGV-FRGVVDRDLRAAQYGGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQKPITDGRAGIREKGRTGYRIAIALLTHFLGQEALLNFDEPLLLALLGVVLRFLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSASLRRGDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQRERGIVVRINGDYGFIRGADREEHLYFNVATARAGPPPR----------LREGADVEFWVV-DDTAKDGRPSLRALG---VVVLPRGSV 1125
            EQG + +LR+ FGFI+C +RP ++FFH S        PD + I  EV+F VG S R   + A+ DV VL PGT+ +E E  PG  F G+V+R +R  + G   +R ++R  G+   V    DG   V+   + + S   +N SV   +    +      E                                  G +LRF +   G                 P AV ++A +G++          +S  L RGD VEF +V  + +  + A ++ ++ S ++R  +E E+ + +   + E G+V  + GDYGF++   R E +YF+ ++                  L+EG +++F VV DD     RPS R +    V   PRGSV
Sbjct:  114 EQGVICSLRDNFGFIRCAERPEEIFFHYSALHDATAHPDDLQIDTEVQFRVGSSARDADKLAALDVCVLEPGTVVWETEDTPGQRFTGIVERPVRTDRAG---DRHHNRNSGKSSAVST--DGTIRVLVPPERTASV--ENESVEPAEPAPVEAITAKAE----------------------------------GPLLRFTLDDYGQT---------------PGAVESSANSGDV------RNTRRSTRLSRGDLVEFSMVTDRRTKDQFARNITLILSEKERAGQEAEKRMLDEATE-EHGVVTSLKGDYGFLKSNKRREQVYFHYSSIHLSDDEDGDGADDEDFVLKEGQEMKFLVVQDDREGSNRPSQRRISARKVKAQPRGSV 438          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig820.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Q3_9PHAE1.910e-4833.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPP6_ECTSI8.450e-4733.07CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6A4EEB2_9STRA1.050e-2528.47Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A329RLV6_9STRA2.550e-2527.32Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
G4Z9V3_PHYSP3.800e-2427.66Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
W2QJD1_PHYPN1.230e-2327.44Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
H3GWZ1_PHYRM1.690e-2328.53Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A662X4D1_9STRA1.400e-2227.93Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
D0NFB4_PHYIT3.280e-2224.87Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
B7FZZ4_PHATC5.870e-2228.35Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig820contigP-wetherbeei_contig820:36..1934 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FPP6
Preferred nameCSDE1
PFAMsCSD,R3H,SUZ-C
Model size1125
Max annot lvl2759|Eukaryota
KEGG koko:K19721
KEGG Pathwayko04974,map04974
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000956,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0007275,GO:0007548,GO:0007549,GO:0008150,GO:0008152,GO:0008406,GO:0008584,GO:0009047,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019222,GO:0019439,GO:0022414,GO:0022607,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034655,GO:0040029,GO:0042714,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045137,GO:0046483,GO:0046546,GO:0046661,GO:0046700,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0061458,GO:0065003,GO:0065007,GO:0070937,GO:0070966,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:2000112,GO:2000113
Exons4
Evalue1.39e-47
EggNOG OGs28K4H@1|root,2QSJ1@2759|Eukaryota
Descriptionnuclear-transcribed mRNA catabolic process, no-go decay
Cds size1125
COG categoryS
BRITEko00000,ko00001,ko00536
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187025.6528857-CDS-P-wetherbeei_contig820:35..1651683187025.6528857-CDS-P-wetherbeei_contig820:35..165Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig820 36..165 -
1683187025.6629305-CDS-P-wetherbeei_contig820:375..5781683187025.6629305-CDS-P-wetherbeei_contig820:375..578Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig820 376..578 -
1683187025.6712186-CDS-P-wetherbeei_contig820:922..15351683187025.6712186-CDS-P-wetherbeei_contig820:922..1535Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig820 923..1535 -
1683187025.6792912-CDS-P-wetherbeei_contig820:1755..19341683187025.6792912-CDS-P-wetherbeei_contig820:1755..1934Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig820 1756..1934 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig820.1.1prot_P-wetherbeei_contig820.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig820 36..1934 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig820.1.1

>prot_P-wetherbeei_contig820.1.1 ID=prot_P-wetherbeei_contig820.1.1|Name=mRNA_P-wetherbeei_contig820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=375bp
SSAPPPPPKREQGRVATLREQFGFIQCCDRPGDLFFHLSVAPDGISIGDE
VEFVVGHSDRSTRECASDVAVLPPGTIRFEAEIPGVFRGVVDRDLRAAQY
GGGINRRNDRQGGRGRPVGRGDDGADGVIKVRQWSLSFIWQNLSVIKGQK
PITDGRAGIREKGRTGYRIAIALLTHFLGQEALLNFDEPLLLALLGVVLR
FLVQVSGPALSKDAATAVEGEAAAPEAVAAAAFAGEMAAFGPTSLADQSA
SLRRGDEVEFRLVQHKGSGRKRAADVRVVRSSRQRQDEEQERALREAGAQ
RERGIVVRINGDYGFIRGADREEHLYFNVATARAGPPPRLREGADVEFWV
VDDTAKDGRPSLRALGVVVLPRGSV
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mRNA from alignment at P-wetherbeei_contig820:36..1934-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig820.1.1 ID=mRNA_P-wetherbeei_contig820.1.1|Name=mRNA_P-wetherbeei_contig820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1899bp|location=Sequence derived from alignment at P-wetherbeei_contig820:36..1934- (Phaeothamnion wetherbeei SAG_119_79)
AGTTCCGCTCCGCCTCCACCTCCCAAGCGAGAGCAAGGCCGCGTCGCAAC GCTGCGGGAGCAATTCGGCTTCATCCAGTGTTGCGACCGACCGGGCGACC TCTTCTTCCACCTTAGCGTTGCCCCTGATGGCATCAGCATCGGCGACGAG GTCGAATTCGTCGTCGGACATAGCGACAGGTCTGCCTACACTGGTGTAAC CGCACCGCACGTATTTTTTCGTGGCGTCTTTGCTGGCGGTCGAAGTATAA GACTTCTTGCCGCTCGCTCTCCATGCTGCCTGGGGTTGGGAAGGAGCATC TGAACCATGTTCTACATTTCTGTGCTTCTTGTCCTCCTTCCCCCCTCCTT CTTCTTCTTTTCCTCCGCTGTCGCCGCCACCGTCGCTGCGTCCCGTCAGG TCGACACGGGAGTGCGCGTCGGACGTGGCAGTGCTGCCACCGGGCACCAT CCGCTTCGAGGCAGAGATCCCAGGAGTCTTCCGCGGCGTCGTGGACCGCG ACCTCCGCGCGGCGCAGTACGGCGGCGGCATAAATCGCCGCAACGACAGG CAGGGCGGCCGAGGACGGCCCGTCGGCCGCGGCGACGACGGCGCTGACGG AGTCATCAAGGTCCGTCAGTGGTCGTTATCTTTTATCTGGCAAAACCTAT CGGTAATTAAGGGACAAAAACCCATTACGGATGGACGTGCCGGCATACGT GAGAAAGGCCGTACTGGTTACCGCATTGCAATAGCCTTACTTACTCATTT TTTGGGCCAGGAGGCGCTACTGAATTTTGATGAGCCTTTGCTTCTTGCGC TTTTGGGCGTCGTTCTGCGCTTCCTTGTGCAGGTGTCGGGTCCAGCTCTG AGCAAGGACGCCGCTACGGCAGTGGAAGGGGAAGCCGCGGCGCCAGAGGC GGTGGCCGCGGCGGCGTTTGCGGGAGAGATGGCGGCTTTCGGACCCACCA GCCTGGCGGACCAAAGCGCATCGCTGCGGCGCGGTGACGAAGTGGAGTTT CGCCTGGTGCAGGTGCATGCGTCGTCCATTGGTTTGGGGCATGTATTTCT CGATCTTGTTTGCTCCCTTCACGGCTTAGTAGTTGTGAAACCGATGGAGT TGTGGTCGGTGGAAATCAACGTTTCGATCTGGTTGCGGTTAGCGTGGGGT GATGCGGCTGTGTTTGTGGAAGAGAGCCTCTGTTGTGAGTTGCGCTGCAA ATTGTTGGTATTCTAAATCCTGCGTTTAGGTTTCGTGCGCGCGATGGTGT GCGCGTTAGCGAACAAAAAGGAACCTCGCGTCCTCCGGTTGCGAACTTTT CTTCTGTATTTGCAATACCGTTTCTGTGGCCTTCACATCCCCATCCGTCC GCGCAGCACAAGGGTAGCGGGCGGAAGCGCGCTGCCGATGTACGCGTGGT GCGGTCGTCGCGGCAGCGGCAGGACGAGGAGCAGGAGCGGGCGCTGCGTG AAGCCGGTGCACAGCGGGAGCGCGGCATCGTCGTCCGCATCAACGGGGAC TACGGCTTCATCCGCGGCGCCGACCGCGAGGAACACCTCTACTTCAACGT CGCCACCGCGTTCGCCGACCGCAGCGGCTGGAATGGCGCCGCCGCCGCGG ATCCTGCCGCCGCGTCTGCTGTGGCGGCCGGGGCGGCGGATGTGGTTGCG GCGGCGGCCAAGGCTGGGCCGACGTCGCCCGGCAAGAGATGCGGCGACAG TAACCTTGCGGCGGCGGGAGCGGGAGCGGGAGCCCCCTCAGCAGGACCGT CGCCAGCCGCCAAGGGCAGCAGGGCAGGACCGCCGCCGCGGCTGCGCGAG GGCGCGGACGTGGAGTTCTGGGTGGTGGACGACACGGCAAAGGACGGGCG GCCAAGCCTGCGGGCGCTTGGCGTAGTGGTGCTGCCGCGCGGGTCGGTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig820:36..1934-

>mRNA_P-wetherbeei_contig820.1.1 ID=mRNA_P-wetherbeei_contig820.1.1|Name=mRNA_P-wetherbeei_contig820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1125bp|location=Sequence derived from alignment at P-wetherbeei_contig820:36..1934- (Phaeothamnion wetherbeei SAG_119_79)
AGTTCCGCTCCGCCTCCACCTCCCAAGCGAGAGCAAGGCCGCGTCGCAAC
GCTGCGGGAGCAATTCGGCTTCATCCAGTGTTGCGACCGACCGGGCGACC
TCTTCTTCCACCTTAGCGTTGCCCCTGATGGCATCAGCATCGGCGACGAG
GTCGAATTCGTCGTCGGACATAGCGACAGGTCGACACGGGAGTGCGCGTC
GGACGTGGCAGTGCTGCCACCGGGCACCATCCGCTTCGAGGCAGAGATCC
CAGGAGTCTTCCGCGGCGTCGTGGACCGCGACCTCCGCGCGGCGCAGTAC
GGCGGCGGCATAAATCGCCGCAACGACAGGCAGGGCGGCCGAGGACGGCC
CGTCGGCCGCGGCGACGACGGCGCTGACGGAGTCATCAAGGTCCGTCAGT
GGTCGTTATCTTTTATCTGGCAAAACCTATCGGTAATTAAGGGACAAAAA
CCCATTACGGATGGACGTGCCGGCATACGTGAGAAAGGCCGTACTGGTTA
CCGCATTGCAATAGCCTTACTTACTCATTTTTTGGGCCAGGAGGCGCTAC
TGAATTTTGATGAGCCTTTGCTTCTTGCGCTTTTGGGCGTCGTTCTGCGC
TTCCTTGTGCAGGTGTCGGGTCCAGCTCTGAGCAAGGACGCCGCTACGGC
AGTGGAAGGGGAAGCCGCGGCGCCAGAGGCGGTGGCCGCGGCGGCGTTTG
CGGGAGAGATGGCGGCTTTCGGACCCACCAGCCTGGCGGACCAAAGCGCA
TCGCTGCGGCGCGGTGACGAAGTGGAGTTTCGCCTGGTGCAGCACAAGGG
TAGCGGGCGGAAGCGCGCTGCCGATGTACGCGTGGTGCGGTCGTCGCGGC
AGCGGCAGGACGAGGAGCAGGAGCGGGCGCTGCGTGAAGCCGGTGCACAG
CGGGAGCGCGGCATCGTCGTCCGCATCAACGGGGACTACGGCTTCATCCG
CGGCGCCGACCGCGAGGAACACCTCTACTTCAACGTCGCCACCGCCAGGG
CAGGACCGCCGCCGCGGCTGCGCGAGGGCGCGGACGTGGAGTTCTGGGTG
GTGGACGACACGGCAAAGGACGGGCGGCCAAGCCTGCGGGCGCTTGGCGT
AGTGGTGCTGCCGCGCGGGTCGGTT
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