mRNA_P-wetherbeei_contig8194.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8194.1.1
Unique NamemRNA_P-wetherbeei_contig8194.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: A0A355TUE7_9BACT (Flagellar basal-body rod protein FlgG n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TUE7_9BACT)

HSP 1 Score: 347 bits (889), Expect = 4.480e-118
Identity = 176/256 (68.75%), Postives = 212/256 (82.81%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMDTPGAEGVGGKTQVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSLGIKIPADMTNVEISADGVIKGTRMGGDKQ-EVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQ 765
            MMRSLYTAASGMMAQQ N+DNISNNLAN QSTGFKK+R+ F+DLLY+TM  PG E   G TQ+GMGVR+ +T++MF+QG LQ+T NPYDVAIQG+GFFKV MPDG S +TRDGAF+YD   GE+  S+G SLGI +P D+TN+E+  +G + G R+ GD Q E + QVKLTRFLNP+ LQA+GGNLY+     GA TE IPG++GLGV+AQGHLEKSNIN+VEEMI+IVQAQR+FEMNQKGVQAADEM + TNQ+Q
Sbjct:    1 MMRSLYTAASGMMAQQMNMDNISNNLANVQSTGFKKTRVDFQDLLYATMQDPGTEATAG-TQIGMGVRASSTERMFSQGSLQKTGNPYDVAIQGDGFFKVTMPDGTSAYTRDGAFKYDGDKGEIVTSAGQSLGIAVPKDVTNIEVRPNGEVFGVRIDGDGQPEKIAQVKLTRFLNPAGLQAIGGNLYVETPVAGAKTESIPGEDGLGVLAQGHLEKSNINVVEEMISIVQAQRAFEMNQKGVQAADEMMRMTNQLQ 255          
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: A0A7X8XPD4_9BURK (Flagellar basal-body rod protein FlgG n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XPD4_9BURK)

HSP 1 Score: 343 bits (880), Expect = 1.080e-116
Identity = 171/257 (66.54%), Postives = 212/257 (82.49%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMDTPGAEGVGGKTQVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSLGIKIPADMTNVEISADGVIKGTRMGGDKQ-EVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQR 768
            MMR+LYTAASGMMAQQ NIDNISNNLAN+QSTGFKKSR+ F+DLLY+TM  PG E   G TQ+GMGVR+ +TQ+ F+QG LQ+TNNPYDVA+QGEGFF+V +PDG + +TRDGAF+YD +  ++   SG  +G+ IP D+TN+EI  +G + G R+ GD Q E +GQ++LTRFLNP+ LQA+GGNLY+     GA TE IPG+NG+G +AQGHLEKSNIN+VEEMI+IVQAQR+FEMNQKGVQAADEM + TNQ+QR
Sbjct:    1 MMRALYTAASGMMAQQLNIDNISNNLANYQSTGFKKSRVDFQDLLYATMQDPGTEATSG-TQIGMGVRAASTQRQFSQGSLQKTNNPYDVAVQGEGFFRVTLPDGTAAYTRDGAFKYDGETQQIVTGSGQPIGVSIPKDVTNIEIRPNGEVFGMRINGDGQAEKVGQIRLTRFLNPAGLQAIGGNLYVETPVAGARTEDIPGQNGMGSLAQGHLEKSNINVVEEMISIVQAQRAFEMNQKGVQAADEMMRMTNQLQR 256          
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: A0A7Z9PRB6_9BACT (Flagellar basal-body rod protein FlgG n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PRB6_9BACT)

HSP 1 Score: 311 bits (797), Expect = 4.830e-104
Identity = 161/260 (61.92%), Postives = 202/260 (77.69%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMDTPGAEGVGGKTQVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSLGIKIPADMTNVEISADGVIKGT--RMGGDKQEVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKN--GLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQR 768
            MMR+LYTAASGMMAQQ NIDN+SNNLAN+Q+TG+KKS ++FEDLLY+TM  PG E  GG TQ+GMGVR+ +T ++FTQG LQ+T NP+ V I+GEGFFKV MPDG+  +TR G F+Y+ K  ++  S+G SLGI IP++ +N++IS  G + G        K E LGQ+KLT+FLNPS L+AVGGNL++  +  G+  EG PG    GLG +AQGHLEKSNINIVEEMI+IVQAQRSFEM+QKGV AADEM K +NQ+ R
Sbjct:    1 MMRALYTAASGMMAQQMNIDNVSNNLANYQTTGYKKSSVAFEDLLYATMQEPGTEATGG-TQIGMGVRATSTDRLFTQGGLQKTGNPFHVGIEGEGFFKVNMPDGKVAYTRAGDFRYNGKTNQVTTSAGHSLGITIPSNYSNIKISPSGEVTGVSNESADGKPETLGQIKLTKFLNPSGLKAVGGNLFVETDVSGSKVEGTPGDKTAGLGALAQGHLEKSNINIVEEMISIVQAQRSFEMSQKGVSAADEMMKQSNQLVR 259          
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: A0A1V5PF12_9BACT (Flagellar basal-body rod protein FlgG n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PF12_9BACT)

HSP 1 Score: 257 bits (656), Expect = 1.030e-82
Identity = 132/256 (51.56%), Postives = 182/256 (71.09%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMDTPGAEGVGGKTQVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSLGIKIPADMTNVEISADGVIKGTRMGGDKQEVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQR 768
            MMR LYTAASGMMAQQ N+D ISNNLAN  +TGFKK RI+F+DL+Y+ ++  G     G  Q+GMGVR V T+K F+QG + QTN+P+D+AIQG GFF+V  PDG   +TRDG+F  + + G++   SG  +G+ IP   T+V+I  DG +     G  + + +G + L  F+NP  L+A+GGN Y    A G   +G PG+N LG +AQG LEK+NIN+VEEMI+I++AQR++E+NQKGVQ+AD+M K  NQ+++
Sbjct:    1 MMRGLYTAASGMMAQQLNMDTISNNLANVNTTGFKKGRINFQDLMYANLNESGENNPMG-AQIGMGVRQVGTEKTFSQGSMSQTNDPFDLAIQGNGFFEVIQPDGTKAYTRDGSFSVNAQ-GQMVTGSGDLVGVTIPPGATDVKIDKDGTVTAILAGQKEHQNIGNLLLVDFVNPQGLKAIGGNKYQNTNASGPAQKGKPGENNLGNIAQGFLEKANINVVEEMISIIEAQRAYEINQKGVQSADQMQKLANQLKK 254          
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: L0KD93_HALHC (Flagellar basal-body rod protein FlgG n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) TaxID=748449 RepID=L0KD93_HALHC)

HSP 1 Score: 242 bits (618), Expect = 7.640e-77
Identity = 129/263 (49.05%), Postives = 177/263 (67.30%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMDTPGAEGVGGKT-----QVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSLG--IKIPADMTNVEISADGVIKGTRMGGDKQEVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQR 768
            M+RSL+TAASGM AQQ N+D ISNNLAN  +TGFKKSR SF+DL+Y T+  PG     G       QVG GVR+  TQK+FTQG L+ T N  D+AIQG+GFFKV++PDG  G+TRDG+F  D   G+L  S G  L   I IPAD TNV I+ +G++     G D  +  GQ++L  F NP+ L+A+G N+Y    A G   +G+PG+ G G +AQG LE SN+ +V+EM+ ++ AQR++E+N K ++ +++M K  N ++R
Sbjct:    1 MIRSLWTAASGMKAQQLNVDTISNNLANVNTTGFKKSRASFQDLMYQTIKQPGTPNSQGSQIPTGIQVGHGVRAAATQKIFTQGSLKNTGNSLDLAIQGDGFFKVRLPDGSIGYTRDGSFNLD-SMGQLVTSDGYKLQPPINIPADATNVTINEEGMVTYMTPGADVPQEGGQIELANFANPAGLKAIGQNIYKQTAASGGAMDGVPGQAGYGTLAQGFLESSNVKVVDEMVDMIAAQRAYEVNSKAIKTSNDMLKQANNLKR 262          
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: A0A7C6KL30_9FIRM (Flagellar basal-body rod protein FlgG n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6KL30_9FIRM)

HSP 1 Score: 239 bits (611), Expect = 8.760e-76
Identity = 126/263 (47.91%), Postives = 185/263 (70.34%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMDTPGAEGVGGKT-----QVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSLG--IKIPADMTNVEISADGVIKGTRMGGDKQEVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQR 768
            MMRSL+TAASGM+AQQ NID+I+NNLAN  + GFK+SR+ F+DLLY T+   G+    G       QVG GVR V+T+++FT G  +QT+NP D+ I+G+GFF+V +PDG + +TRDGAF+ D + G L  S G +L   I IPAD  ++ +  DG +     G ++ + LGQ++L RF+NP+ L+++G NL+    A GA  EG PG +GLG +AQG+LE SN+ +VEEM+ ++ AQR++E+N + +QA+DEM ++ N ++R
Sbjct:    1 MMRSLWTAASGMIAQQFNIDSIANNLANVNTVGFKRSRVDFQDLLYQTVRYAGSPVSAGAQLPTGIQVGHGVRPVSTERIFTTGTFKQTDNPLDLLIEGDGFFQVLLPDGTTAYTRDGAFKIDGQ-GRLVTSDGFTLQPEITIPADAVSINVGTDGTVTVLVSGSNQPQNLGQIRLARFINPAGLRSLGRNLFAATAASGAPQEGTPGLDGLGNIAQGYLEMSNVQVVEEMVNMILAQRAYEVNSRAIQASDEMLQTANNLRR 262          
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: A0A3E0KPB2_9FIRM (Flagellar basal-body rod protein FlgG n=2 Tax=unclassified Firmicutes sensu stricto TaxID=84086 RepID=A0A3E0KPB2_9FIRM)

HSP 1 Score: 235 bits (599), Expect = 5.740e-74
Identity = 126/263 (47.91%), Postives = 176/263 (66.92%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMDTPGAEGVGGKT-----QVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSLG--IKIPADMTNVEISADGVIKGTRMGGDKQEVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQR 768
            MMRSL+TAASGM AQQ NID ISNNLAN  +TGFK+SR+ F+DLLY T+   G     G       Q+G GVR V TQK+FTQG  +QT+NP D+ I+G+GFF++ +PDG   +TRDGAF+ D + G +  S G  L   I +P D   + IS+DG +     G D+ + +GQ++L RF+NP+ L + G NL+I   A G    G PG +G GV+AQG LE SN+ +VEEM+ ++ +QR++E N K +QA+D+M ++ N ++R
Sbjct:    1 MMRSLWTAASGMSAQQFNIDTISNNLANVNTTGFKRSRVDFQDLLYQTLRFAGTPSTQGAQLPIGMQIGHGVRPVATQKIFTQGTFKQTDNPLDIVIEGQGFFQILLPDGTIAYTRDGAFKRDAE-GRIVTSDGFPLEPEIIVPEDAVEITISSDGTVSVLLTGEDEPQNIGQIELARFVNPAGLSSFGRNLFIATAASGLPIIGTPGLDGFGVLAQGFLELSNVQVVEEMVNMIISQRAYESNSKAIQASDDMLQTANNLRR 262          
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: A0A7V2YAT6_9DELT (Flagellar basal-body rod protein FlgG n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V2YAT6_9DELT)

HSP 1 Score: 234 bits (597), Expect = 1.150e-73
Identity = 128/263 (48.67%), Postives = 173/263 (65.78%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMDTPGAEGVGGKT-----QVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSL--GIKIPADMTNVEISADGVIKGTRMGGDKQEVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQR 768
            M+RSL+TAASGM AQQ  ID ISNNLAN  +TGFKKS+++F+DLLY ++  PGA            QVG+G R V   K+F QG  Q T N  D+AI+G+GFFK+ +P G S +TRDGAF+ + + GE+  S G  L  GI IP D T + + ADG +   R G      +G++ LTRF NP  L AVG N ++P ++ G   EG PG  GLG +AQG LE SN+NIVEEM+A++ AQR++E+N K +Q +D+M +  N ++R
Sbjct:    1 MLRSLWTAASGMEAQQLQIDVISNNLANANTTGFKKSKVNFQDLLYQSLSYPGAASSAQSQLPTGFQVGLGTRPVAVHKLFGQGDFQLTRNELDLAIEGQGFFKIILPSGESAYTRDGAFKLNAQ-GEVVTSEGYKLEPGISIPQDATAISVGADGTVSVMRPGQTGFSEVGRITLTRFPNPPGLFAVGRNAFMPTDSSGDPVEGTPGDQGLGTLAQGFLEMSNVNIVEEMVAMIVAQRAYEINSKAIQTSDDMLQMVNNLKR 262          
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: D3PA59_DEFDS (Flagellar basal-body rod protein FlgG n=2 Tax=Deferribacter TaxID=53572 RepID=D3PA59_DEFDS)

HSP 1 Score: 234 bits (597), Expect = 1.150e-73
Identity = 124/263 (47.15%), Postives = 178/263 (67.68%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMDTPG---AEGVGGKT--QVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSL--GIKIPADMTNVEISADGVIKGTRMGGDKQEVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQR 768
            M+R+L+TAASGM  QQ NIDNISNNLAN  + GFKKSR++FEDLLY  +   G   A G+   T  Q+G+G + V+T+K+F+QG  QQT NP D+AI+G+GFF+V +PDG  G+TR+G+F+ D   G L  + G  L   I IP +   + +  DG +  T  G  +   LGQ++L +F+NPS L+++G N+Y+   A G  T GIPG++G G +AQG LE SN+N+VEEM+ ++  QR++E+N K +Q  DEM +  N ++R
Sbjct:    1 MLRTLWTAASGMTTQQINIDNISNNLANVNTAGFKKSRVNFEDLLYQELKPAGGVTAAGINHPTGIQIGLGSKVVSTEKIFSQGNFQQTGNPLDIAIEGDGFFQVTLPDGTIGYTRNGSFKVDAD-GNLVTAEGYLLEPNIAIPDNALEIIVGEDGTLSVTLPGEAEPTELGQIELAKFINPSGLRSIGKNIYLQTAASGEPTTGIPGEDGFGTLAQGILEMSNVNVVEEMVNLITGQRAYEINSKAIQTGDEMLQIVNNLKR 262          
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Match: A0A3E0KBP2_9FIRM (Flagellar basal-body rod protein FlgG n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A3E0KBP2_9FIRM)

HSP 1 Score: 234 bits (597), Expect = 1.150e-73
Identity = 128/263 (48.67%), Postives = 176/263 (66.92%), Query Frame = 1
Query:    1 MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTM---DTPGAEGVGGKT--QVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKVQMPDGRSGFTRDGAFQYDPKAGELKNSSGCSLG--IKIPADMTNVEISADGVIKGTRMGGDKQEVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIPGKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKSTNQMQR 768
            MMRSL+TAASGM AQQ NID I+NNLAN  +TGFKKSR+ F+DLLY T+    TP  +G    T  Q+G GVR V TQK+FT G  +QT+NP D+AI+GEGFF++ MPDG   +TRDGAF+ D   G +  S G  L   I IP D   + I  DG +     G D+ + +G ++L RF+NP+ L + G NL++   A GA   G PG +G G+VAQ +LE SN+ +VEEM+ ++ +QR++E N K +QA+D+M ++ N ++R
Sbjct:    1 MMRSLWTAASGMTAQQFNIDTIANNLANVNTTGFKKSRVDFQDLLYQTLRFAGTPITQGAQIPTGIQMGHGVRPVATQKIFTTGTFKQTDNPLDLAIEGEGFFQILMPDGTIAYTRDGAFKQDAD-GRIVTSDGFPLEPEIIIPEDAVEITIGTDGTVSVMLTGDDEPQTIGMIELVRFVNPAGLASFGRNLFVATAASGAPMVGTPGLDGFGIVAQSYLEMSNVQVVEEMVNMIISQRAYESNSKAIQASDDMLQTANNLRR 262          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8194.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A355TUE7_9BACT4.480e-11868.75Flagellar basal-body rod protein FlgG n=1 Tax=bact... [more]
A0A7X8XPD4_9BURK1.080e-11666.54Flagellar basal-body rod protein FlgG n=1 Tax=Burk... [more]
A0A7Z9PRB6_9BACT4.830e-10461.92Flagellar basal-body rod protein FlgG n=1 Tax=Phyc... [more]
A0A1V5PF12_9BACT1.030e-8251.56Flagellar basal-body rod protein FlgG n=1 Tax=bact... [more]
L0KD93_HALHC7.640e-7749.05Flagellar basal-body rod protein FlgG n=1 Tax=Halo... [more]
A0A7C6KL30_9FIRM8.760e-7647.91Flagellar basal-body rod protein FlgG n=1 Tax=Firm... [more]
A0A3E0KPB2_9FIRM5.740e-7447.91Flagellar basal-body rod protein FlgG n=2 Tax=uncl... [more]
A0A7V2YAT6_9DELT1.150e-7348.67Flagellar basal-body rod protein FlgG n=2 Tax=Delt... [more]
D3PA59_DEFDS1.150e-7347.15Flagellar basal-body rod protein FlgG n=2 Tax=Defe... [more]
A0A3E0KBP2_9FIRM1.150e-7348.67Flagellar basal-body rod protein FlgG n=1 Tax=Firm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8194contigP-wetherbeei_contig8194:158..928 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog748449.Halha_2450
Preferred nameflgG
PFAMsFlg_bb_rod,Flg_bbr_C
Model size771
Max annot lvl186801|Clostridia
KEGG koko:K02390,ko:K02392
KEGG Pathwayko02040,map02040
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.25e-77
EggNOG OGsCOG4786@1|root,COG4786@2|Bacteria,1TT5Z@1239|Firmicutes,248M9@186801|Clostridia
Descriptionbasal body rod protein
Cds size771
COG categoryN
BRITEko00000,ko00001,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187025.3173313-CDS-P-wetherbeei_contig8194:157..9281683187025.3173313-CDS-P-wetherbeei_contig8194:157..928Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8194 158..928 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8194.1.1prot_P-wetherbeei_contig8194.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8194 158..928 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8194.1.1

>prot_P-wetherbeei_contig8194.1.1 ID=prot_P-wetherbeei_contig8194.1.1|Name=mRNA_P-wetherbeei_contig8194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp
MMRSLYTAASGMMAQQQNIDNISNNLANFQSTGFKKSRISFEDLLYSTMD
TPGAEGVGGKTQVGMGVRSVNTQKMFTQGQLQQTNNPYDVAIQGEGFFKV
QMPDGRSGFTRDGAFQYDPKAGELKNSSGCSLGIKIPADMTNVEISADGV
IKGTRMGGDKQEVLGQVKLTRFLNPSALQAVGGNLYIPNEACGATTEGIP
GKNGLGVVAQGHLEKSNINIVEEMIAIVQAQRSFEMNQKGVQAADEMAKS
TNQMQR*
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mRNA from alignment at P-wetherbeei_contig8194:158..928-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8194.1.1 ID=mRNA_P-wetherbeei_contig8194.1.1|Name=mRNA_P-wetherbeei_contig8194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig8194:158..928- (Phaeothamnion wetherbeei SAG_119_79)
ATGATGAGATCTCTTTACACCGCAGCCTCCGGTATGATGGCGCAGCAGCA GAACATCGACAATATCTCCAACAACCTCGCCAACTTCCAGAGCACCGGCT TCAAGAAATCGCGCATCTCTTTCGAAGACCTGCTCTACTCCACGATGGAT ACCCCCGGAGCCGAGGGCGTCGGTGGCAAGACTCAGGTCGGTATGGGCGT GCGTTCGGTCAACACCCAGAAGATGTTCACGCAGGGTCAGCTCCAGCAGA CCAACAACCCGTATGACGTCGCCATCCAGGGCGAAGGCTTCTTCAAGGTC CAGATGCCCGACGGTCGTTCGGGCTTCACCCGCGACGGCGCTTTCCAGTA TGATCCCAAAGCTGGCGAGCTCAAGAACTCTTCGGGCTGCAGCCTCGGCA TCAAGATCCCCGCTGATATGACCAACGTCGAGATCAGCGCCGACGGCGTC ATCAAAGGAACCCGTATGGGTGGCGACAAGCAGGAAGTGCTCGGCCAGGT CAAGCTGACCCGCTTCCTCAATCCTTCGGCCCTCCAGGCCGTTGGTGGCA ACCTTTATATCCCCAACGAGGCTTGCGGTGCAACCACCGAAGGCATCCCC GGCAAGAACGGCCTTGGCGTCGTCGCTCAGGGTCACCTCGAGAAATCCAA CATCAATATCGTCGAAGAAATGATCGCTATCGTCCAGGCGCAGCGCTCTT TCGAGATGAACCAAAAGGGTGTTCAGGCCGCCGACGAGATGGCCAAGAGT ACCAACCAGATGCAGCGCTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8194:158..928-

>mRNA_P-wetherbeei_contig8194.1.1 ID=mRNA_P-wetherbeei_contig8194.1.1|Name=mRNA_P-wetherbeei_contig8194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig8194:158..928- (Phaeothamnion wetherbeei SAG_119_79)
ATGATGAGATCTCTTTACACCGCAGCCTCCGGTATGATGGCGCAGCAGCA
GAACATCGACAATATCTCCAACAACCTCGCCAACTTCCAGAGCACCGGCT
TCAAGAAATCGCGCATCTCTTTCGAAGACCTGCTCTACTCCACGATGGAT
ACCCCCGGAGCCGAGGGCGTCGGTGGCAAGACTCAGGTCGGTATGGGCGT
GCGTTCGGTCAACACCCAGAAGATGTTCACGCAGGGTCAGCTCCAGCAGA
CCAACAACCCGTATGACGTCGCCATCCAGGGCGAAGGCTTCTTCAAGGTC
CAGATGCCCGACGGTCGTTCGGGCTTCACCCGCGACGGCGCTTTCCAGTA
TGATCCCAAAGCTGGCGAGCTCAAGAACTCTTCGGGCTGCAGCCTCGGCA
TCAAGATCCCCGCTGATATGACCAACGTCGAGATCAGCGCCGACGGCGTC
ATCAAAGGAACCCGTATGGGTGGCGACAAGCAGGAAGTGCTCGGCCAGGT
CAAGCTGACCCGCTTCCTCAATCCTTCGGCCCTCCAGGCCGTTGGTGGCA
ACCTTTATATCCCCAACGAGGCTTGCGGTGCAACCACCGAAGGCATCCCC
GGCAAGAACGGCCTTGGCGTCGTCGCTCAGGGTCACCTCGAGAAATCCAA
CATCAATATCGTCGAAGAAATGATCGCTATCGTCCAGGCGCAGCGCTCTT
TCGAGATGAACCAAAAGGGTGTTCAGGCCGCCGACGAGATGGCCAAGAGT
ACCAACCAGATGCAGCGCTAA
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