mRNA_P-wetherbeei_contig8187.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: A0A4D9CX67_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX67_9STRA) HSP 1 Score: 214 bits (545), Expect = 9.340e-60 Identity = 122/267 (45.69%), Postives = 162/267 (60.67%), Query Frame = 1
Query: 1 RAGVLAVPMYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLLNRQAWLMLSGVAVAAATAAAAEPSFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQ---LTLDYHRRGVAPDGPPLGRRRGL------VGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKFLAVQQQQQRVDEPALDLSNIYFVSSGGEPLRADSVKAFADAFRPHGLRERW 774
R GV+AVP+YPP+P+ L SL KL + + GA LCL D ++ R +S+LN+L+ W + A+ S DEP L DIAF+QYTSGST +PKGVMI+F NL H L L RR + R R L VGVSWLPQYHDMGLIV + PF GG+RM++ SPM FV+ P +W++ +S V AH+S AP+FA LTAR++ + QR E ALDL + F+ GGEP+ A+ + +F+ F +GLR W
Sbjct: 114 RLGVVAVPVYPPNPTKLKMSLEKLELIVTSAGATLCLTDNTINWFRKASQLNVLSSAKWPKGLKWDSTDSILASTGTSCDEPGLHPNDIAFLQYTSGSTGDPKGVMITFGNLDHNVNDLILFSLRRDIF-----CNRTRTLENIEVPVGVSWLPQYHDMGLIVGLIMPFVGGFRMYHMSPMTFVKNPLIWIKTISNVGAHFSTAPNFALGLTARRW-----KSQRKKE-ALDLGTLQFIQLGGEPVSAEHIASFSSTFAGYGLRRDW 369
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: W7U9U8_9STRA (Polyketide synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9U8_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.150e-59 Identity = 122/267 (45.69%), Postives = 161/267 (60.30%), Query Frame = 1
Query: 1 RAGVLAVPMYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLLNRQAWLMLSGVAVAAATAAAAEPSFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQ---LTLDYHRRGVAPDGPPLGRRRGL------VGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKFLAVQQQQQRVDEPALDLSNIYFVSSGGEPLRADSVKAFADAFRPHGLRERW 774
R GV+AVP+YPP+P+ L SL KL + + GA LCL D ++ R +S+LN+L+ W + A S DEP L DIAF+QYTSGST +PKGVMI+F NL H L L RR + R R L VGVSWLPQYHDMGLIV + PF GG+RM++ SPM FV+ P +W++ +S V AH+S AP+FA LTAR++ + QR E ALDL + F+ GGEP+ A+ + +F+ F +GLR W
Sbjct: 70 RLGVVAVPVYPPNPTKLKMSLEKLELIVTSAGATLCLTDNTINWFRKASQLNVLSSAKWPKGLKWDSTDSILAGTGTSCDEPGLHPNDIAFLQYTSGSTGDPKGVMITFGNLDHNVNDLILFSLRRDIF-----CNRTRTLENIEVPVGVSWLPQYHDMGLIVGLIMPFVGGFRMYHMSPMTFVKNPLIWIKTISNVGAHFSTAPNFALGLTARRW-----KSQRKKE-ALDLGTLQFIQLGGEPVSAEHIASFSSTFAGYGLRRDW 325
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: D7G4W3_ECTSI (Acyl CoA Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W3_ECTSI) HSP 1 Score: 198 bits (504), Expect = 2.620e-54 Identity = 115/277 (41.52%), Postives = 163/277 (58.84%), Query Frame = 1
Query: 1 RAGVLAVPMYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLL--NRQAWLML--------SGVAVAAAT----------AAAAEPSFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQLTLDYHRRGV---APDGPPLGRRRGLVGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKFLAVQQQQQRVDEPALDLSNIYFVSSGGEPLRADSVKAFADAFRPHGL 762
RAG+LAVP+YPP+P++L KSL KL+ + C ++ L V+ LRLSS+L + W L G +AAA PSFD+P ++ D+AF+Q+TSGST++PKGVM+++ NL H + + A GP G R SWLP +HDMGLI TLAPF G+ Y SP++F+RRP +W++LMS+ K+ + APDFAF+L RK+ + + + LDL +I F+ SGGEP+RA +V+ FA+AF GL
Sbjct: 67 RAGILAVPVYPPNPATLKKSLQKLQLIVDSCTPKMILVCPLVNKLRLSSKLRAVATGNSDWPKLRYHCCPDVKGETIAAAGWRGGGSKQMGPETKRPSFDDPTIKPGDVAFLQFTSGSTSDPKGVMLTYGNLTHNIACIINSSDAQIAARGGPAEGNRTWF---SWLPTFHDMGLIQGTLAPFVAGWTAAYCSPISFMRRPLMWLELMSKEKSQMTAAPDFAFRLCVRKWKEMSPESRAALH--LDLRHIMFMQSGGEPVRASTVRDFAEAFATVGL 338
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: A0A6H5J7K1_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K1_9PHAE) HSP 1 Score: 189 bits (481), Expect = 2.060e-52 Identity = 107/282 (37.94%), Postives = 166/282 (58.87%), Query Frame = 1
Query: 1 RAGVLAVPMYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLL--NRQAW-------------------LMLSGVAVAAATAAAAE-----PSFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQL--TLDYHRRGVAPDGPPLGRRRGLVGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKFLAVQQQQQRVDEPALDLSNIYFVSSGGEPLRADSVKAFADAFRPHGL 762
RAG++AVP+YPP+P++L KSL KL+ + DC ++ L V+ LRL+S+L + + W + SGV + +A+ PSFD+P ++ +D+AF+Q+TSGST++PKGVM+++ NL H + ++ +A G +R SWLP +HDMGLI TLAPF G+ Y SP+ F+RRP +W++LMS+ K+ + APDFAF+L RK+ + + + LDL +I F+ + EP+R+ +V+ FA+AF GL
Sbjct: 61 RAGIIAVPVYPPNPATLKKSLKKLQLIVDDCAPKMALVCPLVNKLRLASKLRAVATGKSGWPDLTYHCPDVKEEKIATGGMSSSGVGWRSGGGRSADVKRTRPSFDDPTIKPQDVAFLQFTSGSTSDPKGVMLTYGNLTHNIGVIVNSSNAQIAARGEVADGQR--TWFSWLPTFHDMGLIQGTLAPFVAGWTAAYCSPITFMRRPLVWLELMSKEKSQMTAAPDFAFRLCLRKWEEMSPESRTALH--LDLKHIMFMQNAAEPVRSSTVRDFAEAFAAVGL 338
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: A0A6H5L5M1_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M1_9PHAE) HSP 1 Score: 175 bits (444), Expect = 7.530e-50 Identity = 100/230 (43.48%), Postives = 139/230 (60.43%), Query Frame = 1
Query: 1 RAGVLAVPMYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLLN--RQAWLML-------------SGVAVAAATAAAAEPSFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQLTL-------DYHRRGVAPDG-PPLGRRRGLVGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKF 621
RAGVLAVP+YPP P +L KSL KL+ + C ++ L G V+ LRL+S+LN ++ R+ W L G++ A SFDE +L E D+AF+Q+TSGST+EPKGVM++F NL H + RG + G +G G+ G SWLPQYHD+GL++ TL PF G+RM Y SP+ FVR+P LW++L+S +A + APDF+ +L RK+
Sbjct: 96 RAGVLAVPVYPPSPLTLSKSLTKLQSIVEACDPKVILVSGDVNRLRLASKLNFVSSARRLWPDLPYKVARSSGVSSGGGISKWLGGAGGGGESFDEESLGEGDVAFLQFTSGSTSEPKGVMVTFGNLEHNARFISRMSEKSFKSRGFSFSGREEVG---GVRGFSWLPQYHDLGLVMCTLTPFVSGWRMGYMSPLDFVRKPLLWLRLLSAERAMFGCAPDFSLRLCVRKW 322
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI) HSP 1 Score: 184 bits (467), Expect = 2.460e-49 Identity = 104/282 (36.88%), Postives = 163/282 (57.80%), Query Frame = 1
Query: 1 RAGVLAVPMYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLL--NRQAW--------------LMLSGVAVA----------AATAAAAEPSFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQL--TLDYHRRGVAPDGPPLGRRRGLVGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKFLAVQQQQQRVDEPALDLSNIYFVSSGGEPLRADSVKAFADAFRPHGL 762
RAG++AVP+YPP+P++L +SL KL+ + C ++ L V+ LRL+S+L + + W + G++ A +A PSFD+P ++ +D+AF+Q+TSGST++PKGVM+++ NL H + ++ +A G +R SWLP +HDMGLI TL PF G+ Y SP+ F+RRP +W++LMS+ K+ + APDFAF+L RK+ + + + LDL +I F+ + EP+RA +V+ FA+AF GL
Sbjct: 529 RAGIIAVPVYPPNPATLKRSLKKLQLIVDSCAPKMVLVCPLVNKLRLASKLRAVATGKSGWPDLPYHCPDVKEENIPTGGMSSATVGWRSGGGKSADVKRTRPSFDDPTIKPQDVAFLQFTSGSTSDPKGVMLTYGNLTHNIGVIVNSSNAQIAERGGVADGQR--TWFSWLPTFHDMGLIQGTLTPFVAGWTAAYCSPITFMRRPLVWLELMSKEKSQMTAAPDFAFRLCVRKWEEMSPENRTALH--LDLKHIMFMQNAAEPVRASTVRDFAEAFAAVGL 806
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: D7FH91_ECTSI (AMP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH91_ECTSI) HSP 1 Score: 179 bits (455), Expect = 3.780e-49 Identity = 109/290 (37.59%), Postives = 161/290 (55.52%), Query Frame = 1
Query: 1 RAGVLAVPMYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLL--NRQAWLML--------------SGVAVAA---------ATAAAAE--------PSFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQLTLDYHRRG---VAPDGPPLGRRRGLVGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKFLAVQQQQQRVDEPALDLSNIYFVSSGGEPLRADSVKAFADAFRPHGL 762
RAG++AVP+YPP+P++L KSL L+ + C ++ L V+ LRL+ +L ++ + W L SG+A A +T A + PSFD+P ++ ED+AF+Q+TSGST++PKGVM+++ NL H + + V G P G R SWLP +HDMGLI TL PF G+ Y SP+ F+RRP +W++LMS+ K + APDFAF+L RK+ + + + LDL I F+ + EP+RA +V+ FA+ F GL
Sbjct: 105 RAGIIAVPVYPPNPATLKKSLQNLQLIVEGCTPKMILVCPLVNKLRLAWKLRVVATGKSGWPNLPYHCPDVKEETIPTSGLAYTAVEWKSRGSKSTDAGTKRPSFQMQRPSFDDPTIKPEDVAFLQFTSGSTSDPKGVMLTYGNLTHNIDAIINSSNAQIVERGGVPGGNRTWF---SWLPTFHDMGLIQGTLVPFLAGWTAAYCSPITFMRRPLMWLELMSKEKTQMTAAPDFAFRLCVRKWKEMSLESRAALH--LDLRPIMFMQNAAEPVRASTVRDFAETFAAVGL 389
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: D7G3Q5_ECTSI (Type I fatty acid synthase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q5_ECTSI) HSP 1 Score: 181 bits (460), Expect = 2.180e-48 Identity = 108/273 (39.56%), Postives = 157/273 (57.51%), Query Frame = 1
Query: 31 PPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLLN--RQAWLML-------SGVA-----VAAATAAAAEP--------SFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQLTL-------DYHRRGVAPDGPPLGRRRGLVGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKFLAVQQQQQRVDEPALDLSNIYFVSSGGEPLRADSVKAFADAFRPHGL 762
PP P +L KSL KL+ + C ++ L G V+ LRL+S+LN ++ R+ W L SGV+ + A +P SFDE +L E D+AF+Q+TSGST+EPKGVM++F NL H + RG + G G G+ G SWLPQYHD+GL++ TL PF G+RM Y SP+ FVR+P LW++L+S +A + APDF+ +L RK+ + + ++DLS + ++ +G EP+RA S++ FA F GL
Sbjct: 4 PPSPLTLSKSLTKLQGIVEACDPKVILISGDVNHLRLASKLNFVSSARRLWPDLPYKVARSSGVSQWGGHLEVARGGGGQPGRKGVGVESFDEESLGEGDVAFLQFTSGSTSEPKGVMVTFGNLGHNARFISRMSEKSFESRGFSFSGRAEGG--GVRGFSWLPQYHDLGLVMCTLTPFVSGWRMGYMSPLDFVRKPLLWLRLLSAERAMFGCAPDFSLRLCVRKWNEATPEVRASMTDSVDLSALNWIQNGAEPIRASSIRDFAATFEGLGL 274
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: A0A6H5JSY1_9PHAE (Carrier domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY1_9PHAE) HSP 1 Score: 178 bits (452), Expect = 2.390e-47 Identity = 109/290 (37.59%), Postives = 162/290 (55.86%), Query Frame = 1
Query: 1 RAGVLAVPMYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLL--NRQAWLML--------------SGVAVAAAT-----AAAAE------------PSFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQLTLDYHRRG---VAPDGPPLGRRRGLVGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKFLAVQQQQQRVDEPALDLSNIYFVSSGGEPLRADSVKAFADAFRPHGL 762
RAG++AVP+YPP+P++L KSL KL+ + C + L V+ LRL+ +L + + W L SG++ +A + +AE PSFD+P ++ ED+AF+Q+TSGST++PKGVM+++ NL H + + V G P G R SWLP +HDMGLI TL PF G+ Y SP+ F+RRP +W++LMS+ K+ + APDFAF+L RK+ + + + LDL I F+ + EP+RA +V+ FA+ F GL
Sbjct: 103 RAGIIAVPVYPPNPATLKKSLQKLQLIVEGCTPNMILVCPLVNKLRLAWKLRAVATGKIGWPNLPYHCPDVKEETIPTSGLSYSAVEWKSRGSKSAEAGTKRPSFQMQRPSFDDPTIKPEDVAFLQFTSGSTSDPKGVMLTYGNLTHNIDAIINSSNAQIVERGGVPGGNRTWF---SWLPAFHDMGLIHGTLVPFLAGWTAAYCSPITFMRRPLMWLELMSKEKSQMTAAPDFAFRLCVRKWKEMSPESRAALH--LDLRPIMFMQNAAEPVRASTVRDFAETFAAVGL 387
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Match: F0YLP9_AURAN (AMP-binding domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLP9_AURAN) HSP 1 Score: 170 bits (431), Expect = 3.720e-46 Identity = 106/260 (40.77%), Postives = 151/260 (58.08%), Query Frame = 1
Query: 1 RAGVLAVPMYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLLNRQAW---LMLSGVAVAAATAAAAEPSFDEPALREEDIAFIQYTSGSTAEPKGVMISFANLYHQLTLDYHRRGVAPDGPPLGRRRGLVGVSWLPQYHDMGLIVATLAPFCGGYRMHYASPMAFVRRPPLWVQLMSRVKAHWSVAPDFAFKLTARKFLAVQQQQQRVDEPALDLSNI-YFVSSGGEPLRADSVKAFADAFRPHGLRE 768
R V+AVP+YPPDP+ L L KL V CG+ LCL + A+ +R++ L+L +R W L+ A++P D P L ++ +AF+QYTSGST +PKGVM++FAN+Y L R +A G G R + GVSWLPQ+HD GL++ + PF GYRM SP+ F++ P LW++ MS+ AHWS APDFA++L + P +DL++I F GE R ++ F + F+P+GLRE
Sbjct: 32 RLRVVAVPVYPPDPNKLALGLKKLDLVKQSCGSSLCLTEKALDQMRIA--LSLTHR--WPPGLVWKRTDRELKFKDASDP--DVPLL-DDAVAFLQYTSGSTGDPKGVMLTFANMY----LPAQRHHLATRGVAAGER--ITGVSWLPQFHDTGLVLCIVGPFVAGYRMVNFSPLTFLKMPLLWLEAMSKYGAHWSAAPDFAYELCENG------DAPKAHAP-IDLASIRQFACGAGERCRPAQLERFMETFKPYGLRE 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8187.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8187.2.1 >prot_P-wetherbeei_contig8187.2.1 ID=prot_P-wetherbeei_contig8187.2.1|Name=mRNA_P-wetherbeei_contig8187.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp MYPPDPSSLDKSLVKLRRVASDCGARLCLCDGAVSALRLSSRLNLLNRQAback to top mRNA from alignment at P-wetherbeei_contig8187:941..2609+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8187.2.1 ID=mRNA_P-wetherbeei_contig8187.2.1|Name=mRNA_P-wetherbeei_contig8187.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1669bp|location=Sequence derived from alignment at P-wetherbeei_contig8187:941..2609+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8187:941..2609+ >mRNA_P-wetherbeei_contig8187.2.1 ID=mRNA_P-wetherbeei_contig8187.2.1|Name=mRNA_P-wetherbeei_contig8187.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig8187:941..2609+ (Phaeothamnion wetherbeei SAG_119_79)back to top |