mRNA_P-wetherbeei_contig8119.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8119.1.2
Unique NamemRNA_P-wetherbeei_contig8119.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: A0A836CLT8_9STRA (40S ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT8_9STRA)

HSP 1 Score: 315 bits (807), Expect = 4.660e-107
Identity = 161/208 (77.40%), Postives = 180/208 (86.54%), Query Frame = 1 
Query:   22 GISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKK-------KAVATETEEKKQSDHLKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKK 624
            GISRDSRHKRRETG KR QVRKKRKFELGRPAANTKMG  R+ +VRCRGGNLK+RALRLE GN+SWG+EVCTRK+R+LDVVYNASNNELVRTKTLVKGA++SIDA+PFR WYE HYG+ IG KK       KA AT  EE K+SDH++RKLA RQ TR LD LLDEQFA+GR+LA I+SRPGQ GRCDGYILEGKELEFYQK L++KK
Sbjct:    2 GISRDSRHKRRETGGKRCQVRKKRKFELGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKK 209
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: D7FHG3_ECTSI (40S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG3_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.400e-102
Identity = 155/203 (76.35%), Postives = 172/203 (84.73%), Query Frame = 1 
Query:   22 GISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKK--KAVATETEEKKQSDHLKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKK 624
            GISRDSRHKRRETG +R + RKKRKFE+GRPAANTK+G KRVH VRCRGGN+KYRALRL++GNFSWG+EVCTRK+R+LDVVYNASNNELVRTKTLVK AI+ +DA PF+ WYE HYGV IG KK  KA   E E   +SDH+KRKLAKRQ  R L  LLDEQ A+GR LA I+SRPGQ GRCDGYILEGKELEFYQK LAKKK
Sbjct:    2 GISRDSRHKRRETGGRRSKYRKKRKFEMGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVVIGLKKGKKAAPVEEEAVAKSDHVKRKLAKRQTDRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKK 204
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: A0A6V2QD30_HETAK (40S ribosomal protein S8 n=2 Tax=Sar TaxID=2698737 RepID=A0A6V2QD30_HETAK)

HSP 1 Score: 300 bits (767), Expect = 4.500e-101
Identity = 155/203 (76.35%), Postives = 171/203 (84.24%), Query Frame = 1 
Query:   22 GISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKK-KAVATETEEKKQSDHLKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKKK 627
            GISRDSRHKRR TG KR Q RKKRKFELGR +ANTK+G KRVH VRC GGN K+RA+RLE G FSWG+E  +RK+++LDVVYNASNNELVRTKTLVKGAIISIDA+P R WYEQHYGV IG KK K  A E E   +S H+ RK A+R  TR LDPLLDEQFANGRLLA+I+SRPGQ GRCDGY+LEGKELEFYQKQLAKKKK
Sbjct:    2 GISRDSRHKRRHTGGKRAQFRKKRKFELGRQSANTKLGAKRVHEVRCMGGNKKFRAIRLETGTFSWGTEAISRKTKILDVVYNASNNELVRTKTLVKGAIISIDAAPLRQWYEQHYGVQIGKKKGKKAAAEEEAVAKSSHVARKQAQRCKTRTLDPLLDEQFANGRLLASISSRPGQSGRCDGYVLEGKELEFYQKQLAKKKK 204
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: A0A2D4BEG8_PYTIN (40S ribosomal protein S8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEG8_PYTIN)

HSP 1 Score: 296 bits (758), Expect = 1.060e-99
Identity = 151/201 (75.12%), Postives = 171/201 (85.07%), Query Frame = 1 
Query:   22 GISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKKKAVATETEEKKQSDHLKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKK 624
            GISRDSRHKRRETG KR Q RKKRKFELGR  ANTK+G KRVH+VR RGGN K+RALRL+ GNFSWG+EV +RK+R+LDVVYNASNNELVRTKT+VKG I+SIDA+PFR WYE HYG  IG KK AV T  +E K+S H++RK+A RQ  R+LD  LDEQFA+GRLLAAIASRPGQ GR DGYILEGKELEFYQ++LA KK
Sbjct:    2 GISRDSRHKRRETGGKRKQYRKKRKFELGRQPANTKLGHKRVHTVRVRGGNTKFRALRLDTGNFSWGTEVLSRKTRILDVVYNASNNELVRTKTIVKGCIVSIDATPFRQWYEAHYGAKIGQKKNAVETADDEAKKSSHVQRKIANRQRDRVLDVKLDEQFASGRLLAAIASRPGQSGRADGYILEGKELEFYQRKLATKK 202
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: H3G699_PHYRM (40S ribosomal protein S8 n=2 Tax=Phytophthora TaxID=4783 RepID=H3G699_PHYRM)

HSP 1 Score: 293 bits (750), Expect = 1.630e-98
Identity = 150/201 (74.63%), Postives = 169/201 (84.08%), Query Frame = 1 
Query:   22 GISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKKKAVATETEEKKQSDHLKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKK 624
            GISRDSRHKRRETG KR Q RKKRKFELGR  A TK+G KRVH+VR RGG+LK+RAL LE GNFSWG+EVC RK+R+LDVVYNASNNELVRTKTLVKGA++ IDA+PFR WYE HYGV IG KK A   E EE K+SDH+ RKLA RQ TR+LDP +DEQ  +GRLLA I+SRPGQ GR DGY+LEGKELEFYQ++LA KK
Sbjct:    1 GISRDSRHKRRETGGKRKQFRKKRKFELGRQPAATKLGGKRVHTVRVRGGHLKFRALHLETGNFSWGTEVCARKTRILDVVYNASNNELVRTKTLVKGAVVLIDATPFRQWYEAHYGVKIGVKKNAEKQEEEEVKKSDHVLRKLAARQRTRVLDPKIDEQVTSGRLLAVISSRPGQSGRADGYLLEGKELEFYQRKLATKK 201
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: A0A812SFI7_SYMMI (40S ribosomal protein S8 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SFI7_SYMMI)

HSP 1 Score: 291 bits (745), Expect = 1.110e-97
Identity = 146/203 (71.92%), Postives = 173/203 (85.22%), Query Frame = 1 
Query:   22 GISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKK-KAVATETEEKKQSDH-LKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKK 624
            GISRDSRHKRR TG ++  ++KKR++ELGRP ANTK+G  R+H+VRCRGGNLK+RA+RL+ GNFSWGSEVCTRK+RVLDVVYNASNNELVRTKTLVK +II +DA+PFRAWYEQHYGV +G KK K  A E E+ ++  H L+RKLA+RQ TR LDP LD+ F++GRLLA I+SRPGQ GRCDGYILEGKEL+FY K L KKK
Sbjct:    2 GISRDSRHKRRATGGRKANLKKKRQYELGRPPANTKLGASRIHTVRCRGGNLKFRAMRLDTGNFSWGSEVCTRKTRVLDVVYNASNNELVRTKTLVKNSIIQVDATPFRAWYEQHYGVKVGVKKAKKTAAEGEDTEKKSHSLQRKLAERQKTRTLDPALDDGFSSGRLLACISSRPGQSGRCDGYILEGKELDFYSKMLKKKK 204
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: A0A7S3JYM8_9STRA (40S ribosomal protein S8 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYM8_9STRA)

HSP 1 Score: 291 bits (745), Expect = 1.470e-97
Identity = 151/211 (71.56%), Postives = 172/211 (81.52%), Query Frame = 1 
Query:   22 GISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKKKAVATETEEKK---------QSDHLKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKKK 627
            GISRDSRHKRR TG KR Q RKKRKFELGR  A TK+G KRVH VR RGGN KYRA+RLE+GNFSWGSEVCTRK+R+LDVVYNASNNELVRTKTLVKGAI+ IDA P ++WYEQHYGV IG KK+      E+++         +S H+ RKL++RQ TR+LDP LD+QFA GRLLA ++SRPGQCGRCDGYILEGKELEFYQK+L  KKK
Sbjct:    2 GISRDSRHKRRATGGKREQYRKKRKFELGRQPAMTKIGEKRVHVVRGRGGNNKYRAIRLESGNFSWGSEVCTRKTRILDVVYNASNNELVRTKTLVKGAIVLIDAHPLKSWYEQHYGVEIGKKKRGQKKSAEDEEALKKKLNESKSSHVLRKLSQRQKTRVLDPSLDDQFAAGRLLACVSSRPGQCGRCDGYILEGKELEFYQKKLQAKKK 212
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: F0WM71_9STRA (40S ribosomal protein S8 n=2 Tax=Albugo TaxID=65356 RepID=F0WM71_9STRA)

HSP 1 Score: 291 bits (744), Expect = 1.480e-97
Identity = 149/202 (73.76%), Postives = 170/202 (84.16%), Query Frame = 1 
Query:   22 GISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKKKAVATE-TEEKKQSDHLKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKK 624
            GISRDSRHKRR+TG KR Q RKKRKFELGR  ANTK+G KRVH VR RGG+ K+RALRLE GNFSWGSE  +RK+R+LDVVYNASNNELVRTKTLVK AI+SIDA+PFR WYE HYGV IG KK A  TE  E++K+SDH+ RKLA+RQ  R+ DP LDEQF +GR+LA ++SRPGQ GR DGYILEGKELEFYQ++LA KK
Sbjct:    2 GISRDSRHKRRDTGGKRKQYRKKRKFELGRQPANTKLGGKRVHRVRVRGGHFKFRALRLETGNFSWGSEAVSRKTRILDVVYNASNNELVRTKTLVKSAIVSIDATPFRQWYETHYGVKIGQKKNAETTEKVEQEKKSDHVMRKLAQRQRGRIFDPKLDEQFTSGRILACVSSRPGQSGRADGYILEGKELEFYQRKLATKK 203
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: A0A8K1C734_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C734_PYTOL)

HSP 1 Score: 290 bits (743), Expect = 2.030e-97
Identity = 148/201 (73.63%), Postives = 168/201 (83.58%), Query Frame = 1 
Query:   22 GISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKKKAVATETEEKKQSDHLKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKK 624
            GISRDSRHKRRETG KR Q RKKRKFE GR  ANTK+G KRVH+VR RGG+ K+RALRL+ GNFSWG+EV  RK+R+LDVVYNASNNELVRTKTLVKGAI+ +DA+PFR WYE HYG  IG KK A A   +E K+SDH+ RK+A RQ TR+LD  LDEQFA+GRL AAI+SRPGQ GR DGYILEGKELEFYQ++LA KK
Sbjct:    2 GISRDSRHKRRETGGKRKQYRKKRKFESGRQPANTKLGHKRVHTVRVRGGHTKFRALRLDTGNFSWGTEVTARKTRILDVVYNASNNELVRTKTLVKGAIVLVDATPFRQWYEAHYGTKIGQKKNAAAETADETKKSDHVVRKIAARQRTRVLDQKLDEQFASGRLFAAISSRPGQSGRADGYILEGKELEFYQRKLATKK 202
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BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Match: D0MUS0_PHYIT (40S ribosomal protein S8 n=15 Tax=Phytophthora TaxID=4783 RepID=D0MUS0_PHYIT)

HSP 1 Score: 290 bits (743), Expect = 2.660e-97
Identity = 146/202 (72.28%), Postives = 169/202 (83.66%), Query Frame = 1 
Query:   19 AGISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVHSVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTKTLVKGAIISIDASPFRAWYEQHYGVTIGHKKKAVATETEEKKQSDHLKRKLAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFYQKQLAKKK 624
            + ISRDSRHKRRETG KR Q RKKRKFELGR  ANTK+G KRVH+VR RGG+LK+RAL LE GNFSWG+EVC RK+R+LDVVYNASNNELVRTKTLVKGA++ +DA+PFR WY+ HYGV IG KK     + EE K+SDH+ RKLA RQ TR+LDP +DEQ  +GRLLA I+SRPGQ GR DGY+LEGKELEFYQ++LA KK
Sbjct:    9 SSISRDSRHKRRETGGKRKQFRKKRKFELGRQPANTKLGGKRVHTVRVRGGHLKFRALHLETGNFSWGTEVCARKTRILDVVYNASNNELVRTKTLVKGAVVLVDATPFRQWYDAHYGVKIGIKKNTPQQQEEEVKKSDHVLRKLANRQRTRVLDPKIDEQVTSGRLLAVISSRPGQSGRADGYLLEGKELEFYQRKLATKK 210
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8119.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLT8_9STRA4.660e-10777.4040S ribosomal protein S8 n=1 Tax=Tribonema minus T... [more]
D7FHG3_ECTSI1.400e-10276.3540S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=... [more]
A0A6V2QD30_HETAK4.500e-10176.3540S ribosomal protein S8 n=2 Tax=Sar TaxID=2698737... [more]
A0A2D4BEG8_PYTIN1.060e-9975.1240S ribosomal protein S8 n=1 Tax=Pythium insidiosu... [more]
H3G699_PHYRM1.630e-9874.6340S ribosomal protein S8 n=2 Tax=Phytophthora TaxI... [more]
A0A812SFI7_SYMMI1.110e-9771.9240S ribosomal protein S8 n=1 Tax=Symbiodinium micr... [more]
A0A7S3JYM8_9STRA1.470e-9771.5640S ribosomal protein S8 n=1 Tax=Aureoumbra lagune... [more]
F0WM71_9STRA1.480e-9773.7640S ribosomal protein S8 n=2 Tax=Albugo TaxID=6535... [more]
A0A8K1C734_PYTOL2.030e-9773.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0MUS0_PHYIT2.660e-9772.2840S ribosomal protein S8 n=15 Tax=Phytophthora Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8119contigP-wetherbeei_contig8119:755..2190 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FHG3
Preferred nameRPS8
PFAMsRibosomal_S8e
Model size630
Max annot lvl2759|Eukaryota
KEGG koko:K02995
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000313,GO:0000462,GO:0000956,GO:0002164,GO:0002181,GO:0002182,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006414,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009547,GO:0009570,GO:0009790,GO:0009791,GO:0009792,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0012505,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0030097,GO:0030312,GO:0030490,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035166,GO:0035167,GO:0042254,GO:0042255,GO:0042274,GO:0042788,GO:0042886,GO:0043009,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043253,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048513,GO:0048519,GO:0048534,GO:0048542,GO:0048569,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051726,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070727,GO:0070925,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904
Exons3
Evalue2.29e-103
EggNOG OGsCOG2007@1|root,KOG3283@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein S8e/ribosomal biogenesis NSA2
Ec32 orthologEc-25_002510.1
Descriptionstructural constituent of ribosome
Cds size630
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187021.6545134-CDS-P-wetherbeei_contig8119:754..9911683187021.6545134-CDS-P-wetherbeei_contig8119:754..991Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8119 755..991 -
1683187021.665482-CDS-P-wetherbeei_contig8119:1393..15571683187021.665482-CDS-P-wetherbeei_contig8119:1393..1557Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8119 1394..1557 -
1683187021.6738148-CDS-P-wetherbeei_contig8119:1961..21901683187021.6738148-CDS-P-wetherbeei_contig8119:1961..2190Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8119 1962..2190 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8119.1.2prot_P-wetherbeei_contig8119.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8119 755..2190 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8119.1.2

>prot_P-wetherbeei_contig8119.1.2 ID=prot_P-wetherbeei_contig8119.1.2|Name=mRNA_P-wetherbeei_contig8119.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=210bp
FSVSWAAGISRDSRHKRRETGAKRPQVRKKRKFELGRPAANTKMGTKRVH
SVRCRGGNLKYRALRLEAGNFSWGSEVCTRKSRVLDVVYNASNNELVRTK
TLVKGAIISIDASPFRAWYEQHYGVTIGHKKKAVATETEEKKQSDHLKRK
LAKRQATRMLDPLLDEQFANGRLLAAIASRPGQCGRCDGYILEGKELEFY
QKQLAKKKK*
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mRNA from alignment at P-wetherbeei_contig8119:755..2190-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8119.1.2 ID=mRNA_P-wetherbeei_contig8119.1.2|Name=mRNA_P-wetherbeei_contig8119.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1436bp|location=Sequence derived from alignment at P-wetherbeei_contig8119:755..2190- (Phaeothamnion wetherbeei SAG_119_79)
TTCTCCGTCTCTTGGGCCGCAGGCATCTCTCGGGACTCACGGCACAAGCG
CCGCGAGACGGGCGCGAAGCGGCCGCAGGTCCGCAAGAAGCGGAAGTTTG
AGCTCGGACGGCCGGCTGCCAACACGAAGATGGGAACGAAGCGCGTTCAC
TCCGTGCGCTGCCGCGGCGGCAACTTGAAGTATCGCGCATTGCGGCTCGA
GGCCGGCAACTTTTCGTGGGGCTCTGAGGGTGAGCGAGGCTCCGTCGGAT
CGCATTTTCAATGCATTAGTGACGATTTCTATTCTCTCGGCCGCACCAAA
CTATCAGACGGAGTTGACTGATAGGATCTCTGCGTCTATTCACGCCTGCT
CCTAGCTTCGTGGGAGGTAGCTCTCCTGCGCCGTGATCTCGCTGCATTAT
TAAACTTTTCTCTGTTCTTTATGCCTGCCTGCTTTGAAACTCGATTCCTC
GACGCGGCCTGCTGCTGCGTCTTGGTTCTGCGCGGCGGCTGCGGCATTGA
TTGTCGCGGCGACCGCGACGGCGGTTGGCGACGGCGGCGGTGACGGCGGT
GGCGGCGGCCTTGGCTTTTGGACGCTGGCCGGCGGACACCGGCTGGATTG
GCGCGGTCTGTCTGGCTGATTGGCTGGCTGCAGTGTGCACCCGTAAATCC
CGCGTGCTAGACGTGGTGTACAACGCGTCGAACAACGAGCTGGTGCGGAC
GAAGACGCTCGTGAAGGGCGCCATCATTTCCATCGACGCCTCTCCCTTCC
GCGCATGGTACGAGCAGCACTACGGCGTCACCATTGGCCACAAGAAGGTG
CGCTTTGCGTTTGTGTGTCGCTGCTAGTTGCTTTTCATTGCGTCTTCCTC
TGTGTCCGCCGTGAAAGGGACTTGAAAGTGTACATAGGAAATACTGTGAC
GCCGCGCGTTCCTTGGCGCTCTTATTGGGTGGGGAAGGTGAACCGGGCTG
AGGCTCGTAGTAGCTGCCTGATTCGTGCGTCGCTGCCTTTGGGCCTAGAG
TTCCTAATTCCTGGCGTGCCTGTTTTGCTTGCGTTACTTAAGCTCGGCAC
TTCGCTATGCTGCCTTGGTCGCTCGTAGTCGCGAGGCGCCGCCTGCAGCC
GGCCTCAATGACGTTGAGTTGCACCCGGGGTGGGATCCGAATTGGACGCC
AACCTGGATTCTGTTTCTCGTTTCTCCTTTCATTTCATCGCAGGGCAAGA
AGGCGGTGGCGACGGAGACGGAGGAGAAGAAGCAATCGGACCACCTGAAG
CGCAAGCTGGCCAAGCGCCAGGCGACGCGCATGCTCGACCCGCTGCTGGA
TGAGCAGTTCGCCAACGGCCGCCTGCTGGCCGCCATCGCGTCGCGGCCCG
GCCAGTGCGGCCGCTGCGACGGCTACATTCTCGAGGGCAAGGAGCTCGAG
TTCTACCAGAAGCAGCTTGCCAAGAAGAAGAAGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8119:755..2190-

>mRNA_P-wetherbeei_contig8119.1.2 ID=mRNA_P-wetherbeei_contig8119.1.2|Name=mRNA_P-wetherbeei_contig8119.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=630bp|location=Sequence derived from alignment at P-wetherbeei_contig8119:755..2190- (Phaeothamnion wetherbeei SAG_119_79)
TTCTCCGTCTCTTGGGCCGCAGGCATCTCTCGGGACTCACGGCACAAGCG
CCGCGAGACGGGCGCGAAGCGGCCGCAGGTCCGCAAGAAGCGGAAGTTTG
AGCTCGGACGGCCGGCTGCCAACACGAAGATGGGAACGAAGCGCGTTCAC
TCCGTGCGCTGCCGCGGCGGCAACTTGAAGTATCGCGCATTGCGGCTCGA
GGCCGGCAACTTTTCGTGGGGCTCTGAGGTGTGCACCCGTAAATCCCGCG
TGCTAGACGTGGTGTACAACGCGTCGAACAACGAGCTGGTGCGGACGAAG
ACGCTCGTGAAGGGCGCCATCATTTCCATCGACGCCTCTCCCTTCCGCGC
ATGGTACGAGCAGCACTACGGCGTCACCATTGGCCACAAGAAGAAGGCGG
TGGCGACGGAGACGGAGGAGAAGAAGCAATCGGACCACCTGAAGCGCAAG
CTGGCCAAGCGCCAGGCGACGCGCATGCTCGACCCGCTGCTGGATGAGCA
GTTCGCCAACGGCCGCCTGCTGGCCGCCATCGCGTCGCGGCCCGGCCAGT
GCGGCCGCTGCGACGGCTACATTCTCGAGGGCAAGGAGCTCGAGTTCTAC
CAGAAGCAGCTTGCCAAGAAGAAGAAGTAA
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