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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 2103 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 2103 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683187021.355244-CDS-P-wetherbeei_contig8111:27..317 | 1683187021.355244-CDS-P-wetherbeei_contig8111:27..317 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig8111 28..317 + |
| 1683187021.3661654-CDS-P-wetherbeei_contig8111:672..2485 | 1683187021.3661654-CDS-P-wetherbeei_contig8111:672..2485 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig8111 673..2485 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8111.1.1 >prot_P-wetherbeei_contig8111.1.1 ID=prot_P-wetherbeei_contig8111.1.1|Name=mRNA_P-wetherbeei_contig8111.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=701bp
RAREAAEAAATEAQGRALAMAAERDAAGAAAKVAEAASEDAATALAAERE
QAAAARTAAETSAAEMSTLMAHAAELETQVRERREALAVEANAATAAKQV
EALKIRVGELEAAEAARVAATAAAADETDSRLAAADARRAAADEAAAAAG
AAAVAAKERAEGLARELAAATKSAAAAQAAVAEATARAERGDSEKAAMVE
RYKALVGKAKEMQQGHRDAVVAAAAAKTVQLAAESESARLAEVVSRLEAA
AEGSTAALAEAAARQSEVEKRAAAEVSRATELEVRVERLSRELESAAATA
GIHLATADAARSKAVARATEVEERAAVLAARTAELEASIETLSSQSAAAA
AEAAAAALGRSEAAGRHTGAEERAAAATARAAELEARMETLIEAMSSESE
AAESTAAAALESAQNEAAARLADAEGRVAAQSGRVAELEARVVALSSSSE
ATARAQESERAEWERRAAAAEAQLKRMREEAAAAREATTVCEASSAAAQE
QLAIAQAKVAAAGKAVAAAREEATKAREEAAGARRSAEEAFETTALRERQ
LAGSADEAARLERERSELEARLAAATVAIDAAAAGAVDALAAAGAELEEE
KRVAAALLAEAGAAAAQKEAETAGVLERFKQLLPKYREVQALHRGAEEAA
GAAQRRAGAAERALEEQRAAAAATLAEAEARAVTAAEAAAAADARAGAAA
E back to topmRNA from alignment at P-wetherbeei_contig8111:28..2485+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig8111.1.1 ID=mRNA_P-wetherbeei_contig8111.1.1|Name=mRNA_P-wetherbeei_contig8111.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2458bp|location=Sequence derived from alignment at P-wetherbeei_contig8111:28..2485+ (Phaeothamnion wetherbeei SAG_119_79)
CGAGCGCGGGAAGCCGCCGAAGCAGCTGCGACAGAAGCACAAGGGCGGGC
ATTGGCCATGGCGGCGGAGCGGGACGCCGCGGGCGCGGCAGCGAAGGTGG
CGGAGGCGGCCTCTGAAGACGCAGCGACGGCACTGGCGGCGGAGCGCGAG
CAGGCGGCGGCGGCGCGCACAGCGGCGGAGACTTCTGCCGCCGAGATGTC
GACGCTGATGGCGCATGCGGCGGAGCTGGAGACGCAGGTGCGGGAGCGGC
GCGAGGCGCTGGCGGTGGAGGCGAACGCGGCGACGGCGGCGTTGGCCGAG
AGTAGGTGCGTGACTGGAGATGTTGTGTGTTTTTTGTTGTGTTCCCTCGT
TTCTCGTGTTGCGTTGCCTGGCTAATGTCAGGCGGGGAAAATATTGTGTT
ACGTCGCTGATTCAAAGGTGATGAAATTATAAGCATTTCTGAAGACTGGC
GGCGCCTTGTGAGCTTCTTGCGGGGTGAGGTCTTGTGTGCAGCCGTCGAC
CCGAACATATTGTAAAAGGTCAAACGTTTTCTGAAGCTTTTGGACACTCA
GAGAGGTCTTGCACGTGCTTGCTTATCCTCCGTTCAATTACCGCAATCCA
CATTACCCTCTCCCTCAATGGAAAAAACTTTGGCTCAACCAGCAGGAAAC
AAGTTGAGGCCCTCAAAATCCGGGTCGGCGAGCTTGAGGCGGCCGAGGCG
GCACGGGTGGCAGCGACGGCGGCGGCCGCCGACGAGACCGACTCGCGTCT
CGCCGCCGCCGACGCCCGGCGGGCCGCTGCAGACGAGGCGGCGGCTGCAG
CCGGCGCAGCTGCTGTCGCCGCGAAGGAGCGCGCGGAAGGGCTGGCGCGA
GAGCTGGCGGCAGCGACGAAGTCGGCAGCGGCGGCACAGGCGGCGGTGGC
CGAGGCGACGGCGCGAGCGGAGCGTGGGGACTCGGAAAAGGCTGCGATGG
TGGAGCGGTACAAGGCACTGGTTGGCAAGGCCAAGGAGATGCAGCAGGGC
CACCGAGACGCCGTCGTGGCCGCCGCAGCGGCGAAAACGGTGCAGCTTGC
GGCCGAATCGGAGAGCGCGCGGCTGGCAGAGGTCGTTTCTAGGCTAGAGG
CGGCGGCGGAAGGCAGCACTGCGGCCCTGGCAGAAGCTGCCGCCCGCCAA
TCCGAGGTGGAGAAACGGGCGGCGGCTGAAGTAAGCCGCGCGACTGAATT
GGAAGTGCGGGTGGAAAGGTTATCGAGAGAACTGGAGAGTGCGGCGGCCA
CGGCGGGGATTCATCTTGCGACGGCCGATGCGGCGCGCAGCAAGGCCGTT
GCTCGCGCCACGGAGGTCGAAGAGCGCGCCGCCGTGCTCGCTGCGCGTAC
CGCGGAACTGGAAGCGAGCATCGAGACGCTGTCGTCGCAATCTGCGGCGG
CGGCAGCAGAGGCGGCGGCGGCGGCGTTGGGGCGCAGCGAGGCGGCCGGC
CGTCACACGGGCGCTGAGGAGCGGGCGGCGGCCGCCACGGCCCGTGCCGC
GGAATTGGAGGCGCGGATGGAGACACTGATTGAGGCAATGTCGTCGGAGT
CGGAGGCGGCCGAGTCTACGGCCGCCGCAGCCCTCGAATCAGCGCAGAAC
GAGGCTGCCGCTCGTCTCGCCGACGCCGAAGGGCGTGTCGCCGCTCAGTC
CGGGCGCGTGGCAGAGCTGGAGGCGCGTGTCGTGGCCCTGTCATCGAGTT
CCGAGGCTACCGCGCGGGCACAGGAATCCGAAAGAGCCGAGTGGGAACGC
CGCGCCGCCGCTGCAGAGGCCCAGTTGAAAAGGATGCGCGAGGAAGCCGC
GGCGGCGCGGGAGGCGACGACGGTGTGCGAAGCGTCATCTGCGGCAGCAC
AGGAGCAGCTCGCGATCGCGCAAGCCAAAGTCGCTGCGGCCGGCAAGGCG
GTGGCGGCGGCACGAGAGGAGGCCACTAAGGCCCGCGAGGAAGCCGCGGG
GGCGAGGCGGTCGGCCGAAGAAGCCTTCGAGACGACCGCGCTGCGAGAGA
GACAGCTCGCAGGGAGCGCTGACGAAGCGGCGCGCCTCGAGCGGGAGCGG
AGTGAGCTTGAAGCGCGGCTGGCAGCGGCGACGGTGGCGATCGATGCGGC
GGCAGCCGGGGCCGTTGATGCATTGGCCGCCGCTGGCGCCGAGTTAGAGG
AGGAGAAGCGGGTGGCGGCGGCGCTGCTGGCCGAGGCCGGCGCCGCGGCG
GCGCAAAAGGAGGCGGAGACGGCTGGCGTCCTCGAGCGCTTCAAGCAGCT
GCTGCCCAAGTACCGCGAGGTGCAGGCGCTACATCGCGGCGCCGAAGAAG
CCGCAGGTGCGGCGCAGCGGCGGGCGGGCGCTGCCGAGCGCGCTTTGGAG
GAACAGCGGGCGGCAGCGGCGGCAACACTGGCGGAGGCGGAAGCCAGAGC
CGTCACCGCGGCTGAGGCGGCCGCTGCGGCCGACGCGCGGGCGGGGGCGG
CCGCGGAG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig8111:28..2485+ >mRNA_P-wetherbeei_contig8111.1.1 ID=mRNA_P-wetherbeei_contig8111.1.1|Name=mRNA_P-wetherbeei_contig8111.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2103bp|location=Sequence derived from alignment at P-wetherbeei_contig8111:28..2485+ (Phaeothamnion wetherbeei SAG_119_79)
CGAGCGCGGGAAGCCGCCGAAGCAGCTGCGACAGAAGCACAAGGGCGGGC
ATTGGCCATGGCGGCGGAGCGGGACGCCGCGGGCGCGGCAGCGAAGGTGG
CGGAGGCGGCCTCTGAAGACGCAGCGACGGCACTGGCGGCGGAGCGCGAG
CAGGCGGCGGCGGCGCGCACAGCGGCGGAGACTTCTGCCGCCGAGATGTC
GACGCTGATGGCGCATGCGGCGGAGCTGGAGACGCAGGTGCGGGAGCGGC
GCGAGGCGCTGGCGGTGGAGGCGAACGCGGCGACGGCGGCGAAACAAGTT
GAGGCCCTCAAAATCCGGGTCGGCGAGCTTGAGGCGGCCGAGGCGGCACG
GGTGGCAGCGACGGCGGCGGCCGCCGACGAGACCGACTCGCGTCTCGCCG
CCGCCGACGCCCGGCGGGCCGCTGCAGACGAGGCGGCGGCTGCAGCCGGC
GCAGCTGCTGTCGCCGCGAAGGAGCGCGCGGAAGGGCTGGCGCGAGAGCT
GGCGGCAGCGACGAAGTCGGCAGCGGCGGCACAGGCGGCGGTGGCCGAGG
CGACGGCGCGAGCGGAGCGTGGGGACTCGGAAAAGGCTGCGATGGTGGAG
CGGTACAAGGCACTGGTTGGCAAGGCCAAGGAGATGCAGCAGGGCCACCG
AGACGCCGTCGTGGCCGCCGCAGCGGCGAAAACGGTGCAGCTTGCGGCCG
AATCGGAGAGCGCGCGGCTGGCAGAGGTCGTTTCTAGGCTAGAGGCGGCG
GCGGAAGGCAGCACTGCGGCCCTGGCAGAAGCTGCCGCCCGCCAATCCGA
GGTGGAGAAACGGGCGGCGGCTGAAGTAAGCCGCGCGACTGAATTGGAAG
TGCGGGTGGAAAGGTTATCGAGAGAACTGGAGAGTGCGGCGGCCACGGCG
GGGATTCATCTTGCGACGGCCGATGCGGCGCGCAGCAAGGCCGTTGCTCG
CGCCACGGAGGTCGAAGAGCGCGCCGCCGTGCTCGCTGCGCGTACCGCGG
AACTGGAAGCGAGCATCGAGACGCTGTCGTCGCAATCTGCGGCGGCGGCA
GCAGAGGCGGCGGCGGCGGCGTTGGGGCGCAGCGAGGCGGCCGGCCGTCA
CACGGGCGCTGAGGAGCGGGCGGCGGCCGCCACGGCCCGTGCCGCGGAAT
TGGAGGCGCGGATGGAGACACTGATTGAGGCAATGTCGTCGGAGTCGGAG
GCGGCCGAGTCTACGGCCGCCGCAGCCCTCGAATCAGCGCAGAACGAGGC
TGCCGCTCGTCTCGCCGACGCCGAAGGGCGTGTCGCCGCTCAGTCCGGGC
GCGTGGCAGAGCTGGAGGCGCGTGTCGTGGCCCTGTCATCGAGTTCCGAG
GCTACCGCGCGGGCACAGGAATCCGAAAGAGCCGAGTGGGAACGCCGCGC
CGCCGCTGCAGAGGCCCAGTTGAAAAGGATGCGCGAGGAAGCCGCGGCGG
CGCGGGAGGCGACGACGGTGTGCGAAGCGTCATCTGCGGCAGCACAGGAG
CAGCTCGCGATCGCGCAAGCCAAAGTCGCTGCGGCCGGCAAGGCGGTGGC
GGCGGCACGAGAGGAGGCCACTAAGGCCCGCGAGGAAGCCGCGGGGGCGA
GGCGGTCGGCCGAAGAAGCCTTCGAGACGACCGCGCTGCGAGAGAGACAG
CTCGCAGGGAGCGCTGACGAAGCGGCGCGCCTCGAGCGGGAGCGGAGTGA
GCTTGAAGCGCGGCTGGCAGCGGCGACGGTGGCGATCGATGCGGCGGCAG
CCGGGGCCGTTGATGCATTGGCCGCCGCTGGCGCCGAGTTAGAGGAGGAG
AAGCGGGTGGCGGCGGCGCTGCTGGCCGAGGCCGGCGCCGCGGCGGCGCA
AAAGGAGGCGGAGACGGCTGGCGTCCTCGAGCGCTTCAAGCAGCTGCTGC
CCAAGTACCGCGAGGTGCAGGCGCTACATCGCGGCGCCGAAGAAGCCGCA
GGTGCGGCGCAGCGGCGGGCGGGCGCTGCCGAGCGCGCTTTGGAGGAACA
GCGGGCGGCAGCGGCGGCAACACTGGCGGAGGCGGAAGCCAGAGCCGTCA
CCGCGGCTGAGGCGGCCGCTGCGGCCGACGCGCGGGCGGGGGCGGCCGCG
GAG back to top
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