mRNA_P-wetherbeei_contig8103.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A1F4CHZ3_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4CHZ3_9PROT) HSP 1 Score: 310 bits (793), Expect = 1.510e-103 Identity = 166/256 (64.84%), Postives = 192/256 (75.00%), Query Frame = 1
Query: 1 MSTRRDAMLREMGIAPIWKERGAVPAVPEAI-VPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQAR 765
M+ RR L EMG+ P+W+ + A + APVAA VS +A E R ARIA+MDW LKA+V +CTACGL K+ Q+V G+GDE ADWLLVGEAPGAEED +GEPFVGQAG+LLDAMLA IGL R +VYIANVLKCRPPGNRNPEA EVA+C+P L RQVELIQP+L+LAMGRFA QTLL +DASIASLRGR H Y GVPLIVTYHPAYLLR+L +KAKAW+DL FA RTM +L+ R
Sbjct: 1 MTARRALFLEEMGLTPLWRLKAGRGGASNAQGLDRPAPVAAPVSAQATIDADE----------RAARIARMDWAELKASVAACTACGLRKTCTQTVVGIGDERADWLLVGEAPGAEEDARGEPFVGQAGKLLDAMLAGIGLKRGEDVYIANVLKCRPPGNRNPEAAEVARCSPFLARQVELIQPRLILAMGRFACQTLLASDASIASLRGREHRYQGVPLIVTYHPAYLLRSLPEKAKAWEDLCFARRTMTNLRQR 246
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A536TN33_9PROT (Type-4 uracil-DNA glycosylase n=6 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TN33_9PROT) HSP 1 Score: 309 bits (792), Expect = 5.750e-103 Identity = 170/277 (61.37%), Postives = 198/277 (71.48%), Query Frame = 1
Query: 1 MSTRRDAMLREMGIAPIWKERGAV----PAVPEAIVPAA-----APVAARVSRAVAPEASEVAPPSTPSVA---------REARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQARAQAP 777
M+ R + L EMG+AP+WK RG P +P+ + AP + A P ++ PP VA R ARI +MDW LK AV +C ACGL K+ Q+VFGVGDE ADWLLVGEAPGAEED +GEPFVGQAGRLLD MLA++GL R NVYI NVLKCRPPGNRNPE EVAQC PHLLRQ+ELI+PKL+LAMGRFAVQ LL+T+ASIASLRGR+H Y GVPLIVTYHPAYLLR L DKAKAW+DL FA R++ LQ+R +P
Sbjct: 1 MNARSERYLEEMGLAPVWKLRGPKRARGPGIPDQEKKSGESRSGAPAVLKPPPARRPP--QILPPIPGLVAAARLDLADDRAARILRMDWPELKTAVAACQACGLRKTCTQTVFGVGDEHADWLLVGEAPGAEEDARGEPFVGQAGRLLDNMLAALGLARGENVYICNVLKCRPPGNRNPEPFEVAQCTPHLLRQLELIRPKLILAMGRFAVQALLSTEASIASLRGRLHRYQGVPLIVTYHPAYLLRNLPDKAKAWEDLCFARRSIAALQSRTASP 275
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A521VHU3_9PROT (Type-4 uracil-DNA glycosylase n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521VHU3_9PROT) HSP 1 Score: 303 bits (776), Expect = 3.470e-101 Identity = 162/253 (64.03%), Postives = 191/253 (75.49%), Query Frame = 1
Query: 1 MSTRRDAMLREMGIAPIWK-ERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
MS RR +L EMG+AP+W+ RG+VP PVAA AP PP+ S++RE +I ++DW+ LK+ V CT C L S Q+VFGVGD A+W+LVGEAPGAEED+ GEPFVGQAG+LLD MLA+IGL R NVYI NVLKCRPPGNRNPE GEVA C+P+LLRQ+ELIQPKL+LAMGRFA QTLL+T+A+IASLRG +H Y GVPLIVTYHPAYLLR L DKAKAW DL FA+RTM+ L
Sbjct: 1 MSRRRLEVLGEMGLAPVWRLRRGSVPE----------PVAA------AP------PPAAGSLSREQQILRLDWERLKSRVAGCTDCKLRASCSQTVFGVGDARAEWMLVGEAPGAEEDRLGEPFVGQAGKLLDNMLAAIGLRRGENVYIGNVLKCRPPGNRNPEPGEVAACSPYLLRQIELIQPKLILAMGRFAAQTLLSTEATIASLRGTLHRYAGVPLIVTYHPAYLLRNLPDKAKAWADLRFAVRTMEGL 231
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A1F4ETT7_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4ETT7_9PROT) HSP 1 Score: 302 bits (774), Expect = 7.220e-101 Identity = 160/241 (66.39%), Postives = 184/241 (76.35%), Query Frame = 1
Query: 34 MGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
MGIAP+W+ R A P A AAAP R+ P PPS REARI M W LK AVP+CTACGLHK+R Q+V GVGDE A+WLLVGEAPGAEED+ GEPFVGQAG+LLD MLA++GL R NVYIANVLKCRPPGNRNPE GE A+CAPHLLRQ+ LI+P+L++A+GR A QTLL +DA+IASLRGRVH Y GVPL+VTYHPAYLLR L DK+KAW DL+FA RT+ L
Sbjct: 1 MGIAPLWRLRAAA-GQPGA---AAAP-----PRSAQPRPLPEPPPSADE--REARILAMSWAELKQAVPACTACGLHKTRAQTVLGVGDERAEWLLVGEAPGAEEDRLGEPFVGQAGKLLDNMLAALGLKRGDNVYIANVLKCRPPGNRNPEPGETAKCAPHLLRQIGLIRPRLIVALGRIAAQTLLNSDATIASLRGRVHRYAGVPLVVTYHPAYLLRNLPDKSKAWADLVFARRTLASL 230
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A3N5WL23_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WL23_9PROT) HSP 1 Score: 301 bits (770), Expect = 7.100e-100 Identity = 156/254 (61.42%), Postives = 192/254 (75.59%), Query Frame = 1
Query: 7 TRRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREAR--IAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQA 762
+RRD +LRE+GI P W+ R A P+ PAA A + VA E+ PS P+ A E +++MDW ALKA V +CTAC LH+ R ++VFGVGDE ADWL VGE PGA+ED +GEPFVGQAGRLLD MLA+I L R NVYIAN++KCRPPGNRNP+A EV C P+L RQ+EL+QPKL++A+G+ A +LL DASIASLRG+VH++ G+PLIVTYHPAYLLRTL DKAKAW+DL FA++TM DLQA
Sbjct: 7 SRRDELLREIGITPRWRLRTA----PQ---PAAQAAALATAGHVARESDAPVMPSLPAGAAEGTGPVSQMDWPALKACVAACTACALHQKRNKTVFGVGDERADWLFVGEGPGADEDAEGEPFVGQAGRLLDNMLAAIALKRGANVYIANIVKCRPPGNRNPQAEEVQACLPYLRRQIELLQPKLIIALGKVAAVSLLGRDASIASLRGQVHEHRGIPLIVTYHPAYLLRTLPDKAKAWEDLCFAVKTMADLQA 253
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A537D9J9_9PROT (Type-4 uracil-DNA glycosylase n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D9J9_9PROT) HSP 1 Score: 299 bits (765), Expect = 7.650e-100 Identity = 155/250 (62.00%), Postives = 177/250 (70.80%), Query Frame = 1
Query: 7 TRRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
+RRDA+L EMG+AP+W+ R + + + W LK AVP+CTACGLHK+RKQ+V GVGDE ADWLL+GEAPGAEED+ GEPFVGQAGRLLD MLA+IGL R NVYIANVLKCRPPGNRNPE EV +CAPHLLRQ+ELI+PKL++AMGRFA QTLL +DASIASLRGR+H Y GVPLIVTYHPAYLLR L DKAKAW DL+FA TM L
Sbjct: 2 SRRDAVLAEMGLAPVWRLRS-----------------------------------------KGKNPRDLWIELKQAVPACTACGLHKTRKQTVLGVGDEHADWLLIGEAPGAEEDRLGEPFVGQAGRLLDNMLAAIGLKRGENVYIANVLKCRPPGNRNPEPEEVRKCAPHLLRQIELIEPKLIVAMGRFAAQTLLNSDASIASLRGRLHSYAGVPLIVTYHPAYLLRNLPDKAKAWADLVFARNTMAGL 210
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A521XV99_9PROT (Type-4 uracil-DNA glycosylase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521XV99_9PROT) HSP 1 Score: 300 bits (769), Expect = 8.220e-100 Identity = 167/256 (65.23%), Postives = 193/256 (75.39%), Query Frame = 1
Query: 7 TRRDAMLREMGIAPIW--KERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQARA 768
+RR+ L E+G+ P+W K R V E A+ A V A+A AS A P+ + R RIA+MDW LKA+V +CTACGL K+ Q+VFGVG E ADWLLVGEAPGAEED +GEPFVGQAG+LLDAMLA IGL R +VYIANVLKCRPPGNRNPE E+AQC+P L RQVELI+P+L+LAMGRFA QTLL TDASIASLRGR+H Y GVPLIVTYHPAYLLR+L DKAKAW+DL A RTM L A+A
Sbjct: 2 SRRELFLEEIGLTPLWRLKSREVGGGVGEEEDRNAS--VAAVPAALARPAS--AQPAIDADDRAGRIARMDWAELKASVAACTACGLRKTCTQTVFGVGGERADWLLVGEAPGAEEDARGEPFVGQAGKLLDAMLAGIGLKRGEDVYIANVLKCRPPGNRNPEHAEMAQCSPFLARQVELIRPRLILAMGRFACQTLLDTDASIASLRGRLHRYRGVPLIVTYHPAYLLRSLPDKAKAWEDLCLARRTMAGLVAQA 253
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A521Z057_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z057_9PROT) HSP 1 Score: 298 bits (763), Expect = 1.830e-99 Identity = 154/249 (61.85%), Postives = 180/249 (72.29%), Query Frame = 1
Query: 10 RRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
RR+ +L EMG++PIW+ RG ++E P K W LK AV CTACGLHK+R Q+VFGVGDE ADW+L+GEAPGAEED+ G+PFVGQAGRLLD MLA+IGL R NVYIANVLKCRPPGNRNP+ EVA+C PHLL+Q+EL++PKL+LA+GRFA QTLL+TDASIASLRGRVH Y GVPLIVTYHPAYLLRTL DKAKAW+DL+FA +TM L
Sbjct: 3 RREVILAEMGLSPIWRLRGC-------------------------RSTEEKPSK-----------KNHWVELKRAVSGCTACGLHKTRTQTVFGVGDENADWMLIGEAPGAEEDRLGDPFVGQAGRLLDNMLAAIGLRRGENVYIANVLKCRPPGNRNPQPEEVAKCTPHLLQQIELVRPKLILALGRFAAQTLLSTDASIASLRGRVHRYAGVPLIVTYHPAYLLRTLPDKAKAWEDLVFARKTMASL 215
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A6F8VEL3_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Sulfurimicrobium lacus TaxID=2715678 RepID=A0A6F8VEL3_9PROT) HSP 1 Score: 299 bits (765), Expect = 2.370e-99 Identity = 154/258 (59.69%), Postives = 188/258 (72.87%), Query Frame = 1
Query: 1 MSTRRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQARAQA 774
M+TRR+ +L+E+ + P+W+ R +V A PEA + SE A + R A I +MDW LK AV +CTAC LH+SR Q+VFGVGDE ADWL VGE PGAEED+QGEPFVGQAG+LLD MLA+I L R +NVYIAN +KCRPPGNRNPEA E+A C P+L RQ+ L+QPKL++A+G+ A Q LL +D SI+SLRG +H HG+PLIVTYHPAYLLRTL DKAKAW+DL FA+RTM LQ AQA
Sbjct: 1 MTTRRE-VLQELDLWPMWRLRNSVAATPEATL----------------SGSETAVDGCDAQDRRAAILRMDWSELKQAVAACTACRLHESRSQTVFGVGDEQADWLFVGEGPGAEEDRQGEPFVGQAGKLLDNMLAAIHLKRDSNVYIANTVKCRPPGNRNPEADEMAACEPYLARQIALLQPKLIVALGKVAAQDLLGSDRSISSLRGTLHQAHGIPLIVTYHPAYLLRTLTDKAKAWEDLCFAVRTMHSLQTGAQA 241
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A1F3YK58_9PROT (Type-4 uracil-DNA glycosylase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YK58_9PROT) HSP 1 Score: 298 bits (763), Expect = 5.110e-99 Identity = 156/247 (63.16%), Postives = 190/247 (76.92%), Query Frame = 1
Query: 34 MGIAPIWKERG--AVPAVPEAIVP--AAAPVAARVSRAVA--PEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
MG++P+W+ RG + P +P + P A +AA VS V+ PE ++V P+ R ARI +M+W L AAV +C AC L K+R +VFGVGD+ ADWL++GEAPGAEED +GEPFVGQ GRLLD MLAS+GL R NVYIANVLKCRPPGNRNP EVAQCAPHL RQ++LI+PKL++AMGRFAVQ LL TDA+IASLRG++H Y GVPLIV+YHPAYLLR+L +KAKAW+DL FA RTM L
Sbjct: 1 MGLSPVWRLRGEDSAPGMPASEQPRIATGRIAAEVSAQVSAQPEVAQV--PALMQDDRNARIMRMEWAELTAAVATCQACPLAKTRTNTVFGVGDQQADWLIIGEAPGAEEDARGEPFVGQGGRLLDNMLASVGLKRGDNVYIANVLKCRPPGNRNPNTSEVAQCAPHLQRQIDLIRPKLIIAMGRFAVQALLETDATIASLRGKLHRYQGVPLIVSYHPAYLLRSLTEKAKAWEDLCFARRTMAGL 245 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8103.2.1 >prot_P-wetherbeei_contig8103.2.1 ID=prot_P-wetherbeei_contig8103.2.1|Name=mRNA_P-wetherbeei_contig8103.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp MSTRRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEAback to top mRNA from alignment at P-wetherbeei_contig8103:1468..2250+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8103.2.1 ID=mRNA_P-wetherbeei_contig8103.2.1|Name=mRNA_P-wetherbeei_contig8103.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig8103:1468..2250+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8103:1468..2250+ >mRNA_P-wetherbeei_contig8103.2.1 ID=mRNA_P-wetherbeei_contig8103.2.1|Name=mRNA_P-wetherbeei_contig8103.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig8103:1468..2250+ (Phaeothamnion wetherbeei SAG_119_79)back to top |