mRNA_P-wetherbeei_contig8103.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8103.2.1
Unique NamemRNA_P-wetherbeei_contig8103.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A1F4CHZ3_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4CHZ3_9PROT)

HSP 1 Score: 310 bits (793), Expect = 1.510e-103
Identity = 166/256 (64.84%), Postives = 192/256 (75.00%), Query Frame = 1
Query:    1 MSTRRDAMLREMGIAPIWKERGAVPAVPEAI-VPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQAR 765
            M+ RR   L EMG+ P+W+ +        A  +   APVAA VS     +A E          R ARIA+MDW  LKA+V +CTACGL K+  Q+V G+GDE ADWLLVGEAPGAEED +GEPFVGQAG+LLDAMLA IGL R  +VYIANVLKCRPPGNRNPEA EVA+C+P L RQVELIQP+L+LAMGRFA QTLL +DASIASLRGR H Y GVPLIVTYHPAYLLR+L +KAKAW+DL FA RTM +L+ R
Sbjct:    1 MTARRALFLEEMGLTPLWRLKAGRGGASNAQGLDRPAPVAAPVSAQATIDADE----------RAARIARMDWAELKASVAACTACGLRKTCTQTVVGIGDERADWLLVGEAPGAEEDARGEPFVGQAGKLLDAMLAGIGLKRGEDVYIANVLKCRPPGNRNPEAAEVARCSPFLARQVELIQPRLILAMGRFACQTLLASDASIASLRGREHRYQGVPLIVTYHPAYLLRSLPEKAKAWEDLCFARRTMTNLRQR 246          
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A536TN33_9PROT (Type-4 uracil-DNA glycosylase n=6 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TN33_9PROT)

HSP 1 Score: 309 bits (792), Expect = 5.750e-103
Identity = 170/277 (61.37%), Postives = 198/277 (71.48%), Query Frame = 1
Query:    1 MSTRRDAMLREMGIAPIWKERGAV----PAVPEAIVPAA-----APVAARVSRAVAPEASEVAPPSTPSVA---------REARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQARAQAP 777
            M+ R +  L EMG+AP+WK RG      P +P+    +      AP   +   A  P   ++ PP    VA         R ARI +MDW  LK AV +C ACGL K+  Q+VFGVGDE ADWLLVGEAPGAEED +GEPFVGQAGRLLD MLA++GL R  NVYI NVLKCRPPGNRNPE  EVAQC PHLLRQ+ELI+PKL+LAMGRFAVQ LL+T+ASIASLRGR+H Y GVPLIVTYHPAYLLR L DKAKAW+DL FA R++  LQ+R  +P
Sbjct:    1 MNARSERYLEEMGLAPVWKLRGPKRARGPGIPDQEKKSGESRSGAPAVLKPPPARRPP--QILPPIPGLVAAARLDLADDRAARILRMDWPELKTAVAACQACGLRKTCTQTVFGVGDEHADWLLVGEAPGAEEDARGEPFVGQAGRLLDNMLAALGLARGENVYICNVLKCRPPGNRNPEPFEVAQCTPHLLRQLELIRPKLILAMGRFAVQALLSTEASIASLRGRLHRYQGVPLIVTYHPAYLLRNLPDKAKAWEDLCFARRSIAALQSRTASP 275          
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A521VHU3_9PROT (Type-4 uracil-DNA glycosylase n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521VHU3_9PROT)

HSP 1 Score: 303 bits (776), Expect = 3.470e-101
Identity = 162/253 (64.03%), Postives = 191/253 (75.49%), Query Frame = 1
Query:    1 MSTRRDAMLREMGIAPIWK-ERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
            MS RR  +L EMG+AP+W+  RG+VP           PVAA      AP      PP+  S++RE +I ++DW+ LK+ V  CT C L  S  Q+VFGVGD  A+W+LVGEAPGAEED+ GEPFVGQAG+LLD MLA+IGL R  NVYI NVLKCRPPGNRNPE GEVA C+P+LLRQ+ELIQPKL+LAMGRFA QTLL+T+A+IASLRG +H Y GVPLIVTYHPAYLLR L DKAKAW DL FA+RTM+ L
Sbjct:    1 MSRRRLEVLGEMGLAPVWRLRRGSVPE----------PVAA------AP------PPAAGSLSREQQILRLDWERLKSRVAGCTDCKLRASCSQTVFGVGDARAEWMLVGEAPGAEEDRLGEPFVGQAGKLLDNMLAAIGLRRGENVYIGNVLKCRPPGNRNPEPGEVAACSPYLLRQIELIQPKLILAMGRFAAQTLLSTEATIASLRGTLHRYAGVPLIVTYHPAYLLRNLPDKAKAWADLRFAVRTMEGL 231          
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A1F4ETT7_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4ETT7_9PROT)

HSP 1 Score: 302 bits (774), Expect = 7.220e-101
Identity = 160/241 (66.39%), Postives = 184/241 (76.35%), Query Frame = 1
Query:   34 MGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
            MGIAP+W+ R A    P A   AAAP      R+  P      PPS     REARI  M W  LK AVP+CTACGLHK+R Q+V GVGDE A+WLLVGEAPGAEED+ GEPFVGQAG+LLD MLA++GL R  NVYIANVLKCRPPGNRNPE GE A+CAPHLLRQ+ LI+P+L++A+GR A QTLL +DA+IASLRGRVH Y GVPL+VTYHPAYLLR L DK+KAW DL+FA RT+  L
Sbjct:    1 MGIAPLWRLRAAA-GQPGA---AAAP-----PRSAQPRPLPEPPPSADE--REARILAMSWAELKQAVPACTACGLHKTRAQTVLGVGDERAEWLLVGEAPGAEEDRLGEPFVGQAGKLLDNMLAALGLKRGDNVYIANVLKCRPPGNRNPEPGETAKCAPHLLRQIGLIRPRLIVALGRIAAQTLLNSDATIASLRGRVHRYAGVPLVVTYHPAYLLRNLPDKSKAWADLVFARRTLASL 230          
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A3N5WL23_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WL23_9PROT)

HSP 1 Score: 301 bits (770), Expect = 7.100e-100
Identity = 156/254 (61.42%), Postives = 192/254 (75.59%), Query Frame = 1
Query:    7 TRRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREAR--IAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQA 762
            +RRD +LRE+GI P W+ R A    P+   PAA   A   +  VA E+     PS P+ A E    +++MDW ALKA V +CTAC LH+ R ++VFGVGDE ADWL VGE PGA+ED +GEPFVGQAGRLLD MLA+I L R  NVYIAN++KCRPPGNRNP+A EV  C P+L RQ+EL+QPKL++A+G+ A  +LL  DASIASLRG+VH++ G+PLIVTYHPAYLLRTL DKAKAW+DL FA++TM DLQA
Sbjct:    7 SRRDELLREIGITPRWRLRTA----PQ---PAAQAAALATAGHVARESDAPVMPSLPAGAAEGTGPVSQMDWPALKACVAACTACALHQKRNKTVFGVGDERADWLFVGEGPGADEDAEGEPFVGQAGRLLDNMLAAIALKRGANVYIANIVKCRPPGNRNPQAEEVQACLPYLRRQIELLQPKLIIALGKVAAVSLLGRDASIASLRGQVHEHRGIPLIVTYHPAYLLRTLPDKAKAWEDLCFAVKTMADLQA 253          
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A537D9J9_9PROT (Type-4 uracil-DNA glycosylase n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D9J9_9PROT)

HSP 1 Score: 299 bits (765), Expect = 7.650e-100
Identity = 155/250 (62.00%), Postives = 177/250 (70.80%), Query Frame = 1
Query:    7 TRRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
            +RRDA+L EMG+AP+W+ R                                          + +  +  W  LK AVP+CTACGLHK+RKQ+V GVGDE ADWLL+GEAPGAEED+ GEPFVGQAGRLLD MLA+IGL R  NVYIANVLKCRPPGNRNPE  EV +CAPHLLRQ+ELI+PKL++AMGRFA QTLL +DASIASLRGR+H Y GVPLIVTYHPAYLLR L DKAKAW DL+FA  TM  L
Sbjct:    2 SRRDAVLAEMGLAPVWRLRS-----------------------------------------KGKNPRDLWIELKQAVPACTACGLHKTRKQTVLGVGDEHADWLLIGEAPGAEEDRLGEPFVGQAGRLLDNMLAAIGLKRGENVYIANVLKCRPPGNRNPEPEEVRKCAPHLLRQIELIEPKLIVAMGRFAAQTLLNSDASIASLRGRLHSYAGVPLIVTYHPAYLLRNLPDKAKAWADLVFARNTMAGL 210          
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A521XV99_9PROT (Type-4 uracil-DNA glycosylase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521XV99_9PROT)

HSP 1 Score: 300 bits (769), Expect = 8.220e-100
Identity = 167/256 (65.23%), Postives = 193/256 (75.39%), Query Frame = 1
Query:    7 TRRDAMLREMGIAPIW--KERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQARA 768
            +RR+  L E+G+ P+W  K R     V E     A+   A V  A+A  AS  A P+  +  R  RIA+MDW  LKA+V +CTACGL K+  Q+VFGVG E ADWLLVGEAPGAEED +GEPFVGQAG+LLDAMLA IGL R  +VYIANVLKCRPPGNRNPE  E+AQC+P L RQVELI+P+L+LAMGRFA QTLL TDASIASLRGR+H Y GVPLIVTYHPAYLLR+L DKAKAW+DL  A RTM  L A+A
Sbjct:    2 SRRELFLEEIGLTPLWRLKSREVGGGVGEEEDRNAS--VAAVPAALARPAS--AQPAIDADDRAGRIARMDWAELKASVAACTACGLRKTCTQTVFGVGGERADWLLVGEAPGAEEDARGEPFVGQAGKLLDAMLAGIGLKRGEDVYIANVLKCRPPGNRNPEHAEMAQCSPFLARQVELIRPRLILAMGRFACQTLLDTDASIASLRGRLHRYRGVPLIVTYHPAYLLRSLPDKAKAWEDLCLARRTMAGLVAQA 253          
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A521Z057_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z057_9PROT)

HSP 1 Score: 298 bits (763), Expect = 1.830e-99
Identity = 154/249 (61.85%), Postives = 180/249 (72.29%), Query Frame = 1
Query:   10 RRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
            RR+ +L EMG++PIW+ RG                           ++E  P             K  W  LK AV  CTACGLHK+R Q+VFGVGDE ADW+L+GEAPGAEED+ G+PFVGQAGRLLD MLA+IGL R  NVYIANVLKCRPPGNRNP+  EVA+C PHLL+Q+EL++PKL+LA+GRFA QTLL+TDASIASLRGRVH Y GVPLIVTYHPAYLLRTL DKAKAW+DL+FA +TM  L
Sbjct:    3 RREVILAEMGLSPIWRLRGC-------------------------RSTEEKPSK-----------KNHWVELKRAVSGCTACGLHKTRTQTVFGVGDENADWMLIGEAPGAEEDRLGDPFVGQAGRLLDNMLAAIGLRRGENVYIANVLKCRPPGNRNPQPEEVAKCTPHLLQQIELVRPKLILALGRFAAQTLLSTDASIASLRGRVHRYAGVPLIVTYHPAYLLRTLPDKAKAWEDLVFARKTMASL 215          
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A6F8VEL3_9PROT (Type-4 uracil-DNA glycosylase n=1 Tax=Sulfurimicrobium lacus TaxID=2715678 RepID=A0A6F8VEL3_9PROT)

HSP 1 Score: 299 bits (765), Expect = 2.370e-99
Identity = 154/258 (59.69%), Postives = 188/258 (72.87%), Query Frame = 1
Query:    1 MSTRRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDLQARAQA 774
            M+TRR+ +L+E+ + P+W+ R +V A PEA +                  SE A     +  R A I +MDW  LK AV +CTAC LH+SR Q+VFGVGDE ADWL VGE PGAEED+QGEPFVGQAG+LLD MLA+I L R +NVYIAN +KCRPPGNRNPEA E+A C P+L RQ+ L+QPKL++A+G+ A Q LL +D SI+SLRG +H  HG+PLIVTYHPAYLLRTL DKAKAW+DL FA+RTM  LQ  AQA
Sbjct:    1 MTTRRE-VLQELDLWPMWRLRNSVAATPEATL----------------SGSETAVDGCDAQDRRAAILRMDWSELKQAVAACTACRLHESRSQTVFGVGDEQADWLFVGEGPGAEEDRQGEPFVGQAGKLLDNMLAAIHLKRDSNVYIANTVKCRPPGNRNPEADEMAACEPYLARQIALLQPKLIVALGKVAAQDLLGSDRSISSLRGTLHQAHGIPLIVTYHPAYLLRTLTDKAKAWEDLCFAVRTMHSLQTGAQA 241          
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Match: A0A1F3YK58_9PROT (Type-4 uracil-DNA glycosylase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YK58_9PROT)

HSP 1 Score: 298 bits (763), Expect = 5.110e-99
Identity = 156/247 (63.16%), Postives = 190/247 (76.92%), Query Frame = 1
Query:   34 MGIAPIWKERG--AVPAVPEAIVP--AAAPVAARVSRAVA--PEASEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGDEMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIANVLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTTDASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQDL 756
            MG++P+W+ RG  + P +P +  P  A   +AA VS  V+  PE ++V  P+     R ARI +M+W  L AAV +C AC L K+R  +VFGVGD+ ADWL++GEAPGAEED +GEPFVGQ GRLLD MLAS+GL R  NVYIANVLKCRPPGNRNP   EVAQCAPHL RQ++LI+PKL++AMGRFAVQ LL TDA+IASLRG++H Y GVPLIV+YHPAYLLR+L +KAKAW+DL FA RTM  L
Sbjct:    1 MGLSPVWRLRGEDSAPGMPASEQPRIATGRIAAEVSAQVSAQPEVAQV--PALMQDDRNARIMRMEWAELTAAVATCQACPLAKTRTNTVFGVGDQQADWLIIGEAPGAEEDARGEPFVGQGGRLLDNMLASVGLKRGDNVYIANVLKCRPPGNRNPNTSEVAQCAPHLQRQIDLIRPKLIIAMGRFAVQALLETDATIASLRGKLHRYQGVPLIVSYHPAYLLRSLTEKAKAWEDLCFARRTMAGL 245          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8103.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4CHZ3_9PROT1.510e-10364.84Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteoba... [more]
A0A536TN33_9PROT5.750e-10361.37Type-4 uracil-DNA glycosylase n=6 Tax=Betaproteoba... [more]
A0A521VHU3_9PROT3.470e-10164.03Type-4 uracil-DNA glycosylase n=4 Tax=unclassified... [more]
A0A1F4ETT7_9PROT7.220e-10166.39Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteoba... [more]
A0A3N5WL23_9PROT7.100e-10061.42Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteoba... [more]
A0A537D9J9_9PROT7.650e-10062.00Type-4 uracil-DNA glycosylase n=5 Tax=Betaproteoba... [more]
A0A521XV99_9PROT8.220e-10065.23Type-4 uracil-DNA glycosylase n=3 Tax=unclassified... [more]
A0A521Z057_9PROT1.830e-9961.85Type-4 uracil-DNA glycosylase n=1 Tax=Betaproteoba... [more]
A0A6F8VEL3_9PROT2.370e-9959.69Type-4 uracil-DNA glycosylase n=1 Tax=Sulfurimicro... [more]
A0A1F3YK58_9PROT5.110e-9963.16Type-4 uracil-DNA glycosylase n=2 Tax=unclassified... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8103contigP-wetherbeei_contig8103:1468..2250 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1123487.KB892841_gene4239
PFAMsUDG
Model size783
Max annot lvl206389|Rhodocyclales
KEGG koko:K21929
KEGG Pathwayko03410,map03410
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.55e-94
EggNOG OGsCOG1573@1|root,COG1573@2|Bacteria,1MWX1@1224|Proteobacteria,2VPZQ@28216|Betaproteobacteria,2KUYX@206389|Rhodocyclales
EC3.2.2.27
Descriptionuracil-DNA glycosylase
Cds size783
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187020.7984393-CDS-P-wetherbeei_contig8103:1467..22501683187020.7984393-CDS-P-wetherbeei_contig8103:1467..2250Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8103 1468..2250 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8103.2.1prot_P-wetherbeei_contig8103.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8103 1468..2250 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8103.2.1

>prot_P-wetherbeei_contig8103.2.1 ID=prot_P-wetherbeei_contig8103.2.1|Name=mRNA_P-wetherbeei_contig8103.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
MSTRRDAMLREMGIAPIWKERGAVPAVPEAIVPAAAPVAARVSRAVAPEA
SEVAPPSTPSVAREARIAKMDWDALKAAVPSCTACGLHKSRKQSVFGVGD
EMADWLLVGEAPGAEEDQQGEPFVGQAGRLLDAMLASIGLDRTTNVYIAN
VLKCRPPGNRNPEAGEVAQCAPHLLRQVELIQPKLVLAMGRFAVQTLLTT
DASIASLRGRVHDYHGVPLIVTYHPAYLLRTLQDKAKAWQDLLFALRTMQ
DLQARAQAPN*
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mRNA from alignment at P-wetherbeei_contig8103:1468..2250+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8103.2.1 ID=mRNA_P-wetherbeei_contig8103.2.1|Name=mRNA_P-wetherbeei_contig8103.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig8103:1468..2250+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTACCCGCCGCGACGCGATGCTGCGCGAGATGGGCATCGCCCCGAT CTGGAAGGAACGGGGGGCCGTCCCGGCGGTGCCGGAGGCCATCGTCCCGG CCGCGGCGCCTGTCGCAGCCCGCGTTTCCCGCGCTGTAGCGCCGGAGGCG TCCGAGGTCGCGCCACCGAGCACGCCATCGGTCGCGCGGGAGGCCCGGAT CGCGAAGATGGACTGGGACGCGCTCAAGGCGGCGGTGCCTTCCTGCACCG CGTGCGGGCTGCACAAGTCGAGGAAGCAGTCCGTGTTCGGCGTGGGCGAC GAGATGGCCGACTGGCTGCTGGTCGGAGAGGCGCCCGGTGCGGAGGAGGA CCAGCAGGGCGAGCCCTTCGTCGGCCAGGCCGGCCGGCTGCTGGATGCCA TGCTGGCTTCGATCGGCCTCGATCGCACCACCAACGTCTACATCGCCAAC GTGCTGAAGTGCCGGCCGCCCGGCAACCGCAACCCGGAGGCGGGTGAGGT GGCGCAGTGCGCGCCCCACCTGCTACGGCAGGTCGAGCTGATCCAGCCGA AGCTGGTCCTCGCGATGGGGCGGTTCGCCGTACAGACGCTGCTCACCACC GATGCGTCCATCGCCAGCCTGCGCGGGCGGGTGCACGACTACCACGGGGT GCCGCTGATCGTGACCTACCACCCGGCCTACCTGCTGCGCACGCTGCAGG ACAAGGCCAAGGCCTGGCAGGACCTCCTTTTCGCGTTGCGCACCATGCAG GACTTGCAAGCCAGGGCACAAGCCCCAAACTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8103:1468..2250+

>mRNA_P-wetherbeei_contig8103.2.1 ID=mRNA_P-wetherbeei_contig8103.2.1|Name=mRNA_P-wetherbeei_contig8103.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig8103:1468..2250+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTACCCGCCGCGACGCGATGCTGCGCGAGATGGGCATCGCCCCGAT
CTGGAAGGAACGGGGGGCCGTCCCGGCGGTGCCGGAGGCCATCGTCCCGG
CCGCGGCGCCTGTCGCAGCCCGCGTTTCCCGCGCTGTAGCGCCGGAGGCG
TCCGAGGTCGCGCCACCGAGCACGCCATCGGTCGCGCGGGAGGCCCGGAT
CGCGAAGATGGACTGGGACGCGCTCAAGGCGGCGGTGCCTTCCTGCACCG
CGTGCGGGCTGCACAAGTCGAGGAAGCAGTCCGTGTTCGGCGTGGGCGAC
GAGATGGCCGACTGGCTGCTGGTCGGAGAGGCGCCCGGTGCGGAGGAGGA
CCAGCAGGGCGAGCCCTTCGTCGGCCAGGCCGGCCGGCTGCTGGATGCCA
TGCTGGCTTCGATCGGCCTCGATCGCACCACCAACGTCTACATCGCCAAC
GTGCTGAAGTGCCGGCCGCCCGGCAACCGCAACCCGGAGGCGGGTGAGGT
GGCGCAGTGCGCGCCCCACCTGCTACGGCAGGTCGAGCTGATCCAGCCGA
AGCTGGTCCTCGCGATGGGGCGGTTCGCCGTACAGACGCTGCTCACCACC
GATGCGTCCATCGCCAGCCTGCGCGGGCGGGTGCACGACTACCACGGGGT
GCCGCTGATCGTGACCTACCACCCGGCCTACCTGCTGCGCACGCTGCAGG
ACAAGGCCAAGGCCTGGCAGGACCTCCTTTTCGCGTTGCGCACCATGCAG
GACTTGCAAGCCAGGGCACAAGCCCCAAACTAG
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