mRNA_P-wetherbeei_contig8098.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8098.1.1
Unique NamemRNA_P-wetherbeei_contig8098.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: D8LLC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC4_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 2.350e-104
Identity = 267/376 (71.01%), Postives = 301/376 (80.05%), Query Frame = 1
Query:   16 KQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            K+FED IR+QR+HIG W+KY+ WEESQ E ER+RS+YER+L+VD+++Q+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            ERWMEWEP+DNA           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+AEL + E + E+L  AFA FEERCKE DRARVIYKYALDQ  REQ+PEL+R F+ FEKRHG V  IEE ++  RRLQYEE  +A P DYD WFDY+RLEES  DL R REVYERAIANVPPV EKRFWRRY+ LW+ YA+FEELQA D  R + VY ACL V+PH++FTF K+WL+LAK  VR KDL AARK LG AIG C
Sbjct:   58 KEFEDAIRKQREHIGNWLKYSTWEESQMEFERARSVYERSLEVDYRNQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMEWEPEDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALAELSDSE-KTEKLFSAFAHFEERCKEFDRARVIYKYALDQMPREQVPELYRDFIGFEKRHGSVQGIEEVIMNNRRLQYEERASASPLDYDNWFDYLRLEESTGDLDRTREVYERAIANVPPVLEKRFWRRYIYLWINYALFEELQAEDAQRTREVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMC 432          
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: A0A835ZA95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA95_9STRA)

HSP 1 Score: 321 bits (822), Expect = 2.030e-100
Identity = 264/376 (70.21%), Postives = 295/376 (78.46%), Query Frame = 1
Query:   16 KQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            K++ED IR QRQHIGTW+KYAAWEESQ E  R+                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            ERWM+WEPDDNAW A++KFE   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A++EL E E R E+L ++FA+FEERCKE DRARVIYKYALDQ  R+ +P+L+R F  FEKR G    IE+AVV +RRLQYEEEVAADPH YD WFDY RLEES  D  R+REVYERA+A VPPVA+KRFWRRYV LW+ YA+FEEL A D  RA+AV  ACL+V+PHE+FTF K+WL+LA L VR +DL AARK LG AIGRC
Sbjct:   57 KEYEDSIRMQRQHIGTWIKYAAWEESQAEFARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMDWEPDDNAWGAYIKFETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERALSELDE-ESRTEKLYISFAQFEERCKEYDRARVIYKYALDQMPRDLVPDLYREFAGFEKRRGTPSGIEDAVVGRRRLQYEEEVAADPHAYDTWFDYARLEESTGDGNRVREVYERAVACVPPVAQKRFWRRYVWLWINYALFEELAADDQARARAVLKACLQVVPHESFTFAKIWLMLAHLEVRARDLPAARKVLGNAIGRC 431          
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: A0A4D9CYM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYM6_9STRA)

HSP 1 Score: 310 bits (794), Expect = 2.660e-96
Identity = 220/376 (58.51%), Postives = 257/376 (68.35%), Query Frame = 1
Query:   16 KQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            K+FED IRRQR  +GT+MKYAAWEESQ E ER+RS+YER LDVD+++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  MLG       V        P   A+  + K+E R                                              A+ ELPE E +GERL VAFA FEER KE +R+RVIYKYALD   RE++PEL++ FVAFEK+HG    IE+ VV+KRR QYEE ++ADP DYD WFDY RLEE   +L  +REVYERAIAN+PPV EKRFWRRY+ LW+ YA+FEELQAG+V RA+ VY ACLRVIPH+ FTF K+W+L A L VR KDL AARK +G AIGRC
Sbjct:   56 KEFEDQIRRQRMFLGTYMKYAAWEESQHEFERARSVYERCLDVDYRNTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEMLGNITAGAYVV-----CHPTMRAFLKYAKWEERNQFQPALARVVYER--------------------------------ALQELPEAE-KGERLYVAFARFEERQKEYERSRVIYKYALDNLPREKIPELYQQFVAFEKKHGDRAAIEDVVVSKRRGQYEEALSADPLDYDVWFDYARLEEGQGELSAVREVYERAIANLPPVPEKRFWRRYIYLWINYALFEELQAGEVERAREVYKACLRVIPHKVFTFAKIWVLAAHLEVRCKDLGAARKLMGQAIGRC 393          
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: H3CZE3_TETNG (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CZE3_TETNG)

HSP 1 Score: 302 bits (773), Expect = 4.940e-93
Identity = 228/376 (60.64%), Postives = 280/376 (74.47%), Query Frame = 1
Query:   16 KQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            K FED IR+ R  I  W+KYA WEES +EI+R+RSIYERALDV+ ++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MLG     R VFERWMEWEP++ AW +++ FE+R                    XXXXXXXXXXXXXXXXXXXXXXXXXX   E    +   E L VAFA+FEE  KE +RARVIYKY+LD+  +++  +L + +  FEK+ G    IE+ +V+KRR QYEEEV A+PH+YDAWFDY+RL E+ AD+  +R+VYERAIAN+PP+ EKR WRRY+ LW+ YA++EEL+  D  R + VY ACL +IPH+ FTF KMWLL A+  +R+K+L AARKT+GTAIG+C
Sbjct:   68 KAFEDNIRKNRTIISNWIKYAQWEESLEEIQRARSIYERALDVEHRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMLGNPAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKARSIYERYILLVHPXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEFFGEDHIEENLFVAFAKFEEAQKEFERARVIYKYSLDRIPKQEAQQLFKHYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVENDADVDTVRDVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLDLIPHKKFTFAKMWLLYAQFEIRQKNLQAARKTMGTAIGKC 443          
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: A0A3Q3XBL9_MOLML (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3XBL9_MOLML)

HSP 1 Score: 298 bits (762), Expect = 8.380e-92
Identity = 223/376 (59.31%), Postives = 263/376 (69.95%), Query Frame = 1
Query:   16 KQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            K FED IR+ R  I  W+KYA WEES KE++R+RSIYERALDVD      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MLG A   R  FERWMEWEPD+ AW +F+ FE+R                           XXXXXXXXXXXXXXXXXXX   E    +   E L VAFA+FEE  KE +R RVIYKYAL +  ++Q  EL + +  FEK+ G    IE+ +V+KRR QYEEEV A+PH+YDAWFDY+RL E  AD   +REVYERAIANVPP+ EKR W+RY+ LW+ YA++EEL+  D  R   VY ACL +IPH+ FTF K+WLL AK  +R+K+L  ARK +G AIG+C
Sbjct:   68 KAFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMLGNAAGCRQAFERWMEWEPDEQAWHSFINFELRYKEVDKARNIYERYILFLSSVLKNWIKXXXXXXXXXXXXXXXXXXXXAVEFFGDDHVEENLFVAFAKFEETQKEFERVRVIYKYALGKIPKQQAQELFKYYTMFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVEHDADAETVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEVKDAERTGQVYQACLELIPHKKFTFAKIWLLYAKFEIRQKNLPGARKIMGMAIGKC 443          
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: W5NJR9_LEPOC (Crooked neck pre-mRNA splicing factor 1 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5NJR9_LEPOC)

HSP 1 Score: 297 bits (761), Expect = 6.330e-91
Identity = 203/376 (53.99%), Postives = 248/376 (65.96%), Query Frame = 1
Query:   16 KQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            K FED IR+ R  I  W+KYA WEES KE++R+RSIYERALDVD ++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        R VFERWMEWEPD+ AW +++ FE+R                                                 E    E   E L VAFA+FEE+ KE +R RVIYKYALD+  ++Q  EL + +  FEK+ G    IE+ +V+KRR QYEEEV A+PH+YDAWFDY+RL ES AD   +REVYERAIAN+PP+ EKR WRRY+ LW+ YA++EEL+  D  R + VY ACL +IPH+ FTF K+WLL A+  +R+K+L  AR+ LGT IG+C
Sbjct:   67 KGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCRQVFERWMEWEPDEQAWHSYINFELRYKEVDKARFIYETVLVIVHPEVKNWIKYARFEEKHGYIGHSRKVFERAVEFFGEEHVDEHLYVAFAKFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADADTVREVYERAIANIPPIPEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLCAQFEIRQKNLPFARRALGTGIGKC 442          
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: A0A6A7G2M1_9CRUS (Crooked neck-like protein 1 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G2M1_9CRUS)

HSP 1 Score: 296 bits (758), Expect = 7.470e-91
Identity = 201/381 (52.76%), Postives = 255/381 (66.93%), Query Frame = 1
Query:   16 KQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMR-----RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            K+FED IRRQR   G WMKYAAWE +Q E ER RSIYERALDVD+++ S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LG  D AR +FERWM+W P  NAW +++K EMR                                                   A+ EL + +    +L +AFA  E++ KE DR+RVIYK+ALD   +    +L+  + AFEK+HGG   I+E +++KRR QYEEE+ ++P +YD WFDY++LEES  +  RIR+VYER+I+ +PP+ EKR+WRRY+ LW+ YA+FEEL A D+ RA++VY+ C   IPHE FTF K+WL+ A L +R KDL +ARK LG ++GRC
Sbjct:   75 KEFEDVIRRQRMSTGIWMKYAAWEATQHEWERCRSIYERALDVDYRNHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNMDLARAIFERWMKWHPGPNAWESYIKLEMRCSGRREQRLSRTRQIWLRYTRSHANVESFMKWAKFEEKHANIIKAREVYARALEELGK-DAHIAKLFIAFAGLEQKAKEIDRSRVIYKFALDHIPKHLAADLYARYTAFEKQHGGRDSIDEVILSKRRFQYEEELKSNPRNYDVWFDYVKLEESNNNFERIRDVYERSISQLPPLKEKRYWRRYIYLWIRYAIFEELTAKDIDRARSVYAKCCEHIPHEEFTFAKVWLMRANLEIRAKDLTSARKILGESLGRC 454          
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: A0A8C0YJZ9_CYPCA (Crooked neck pre-mRNA splicing factor 1 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C0YJZ9_CYPCA)

HSP 1 Score: 295 bits (754), Expect = 9.190e-91
Identity = 203/375 (54.13%), Postives = 248/375 (66.13%), Query Frame = 1
Query:   22 FEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMR-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            FED IR+ R  I  W+KYA WEES KE++R+RSIYERALDVD ++ +LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  G     R VFERWMEWEP++ AW +++ FE+R +                                                E    E   E L VAFA FEE+ KE +R RVIYKYALD+  ++Q  EL + +  FEKR G    IE+ +V+KRR QYEEEV A+PH+YDAWFDY+RL ES  D   +REVYERAIAN PP+ EKR WRRY+ LW+ YA++EEL+  D  R + VY ACL +IPH+ FTF K+WLL  +  +R+K+L  AR+ LGTAIG+C
Sbjct:   44 FEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNITLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNIAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKSRIILNGKALVMVHPEVKNWIKYAHFEEKHGYIALARKVFERAVEFFGEEHISESLYVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDTDADTVREVYERAIANTPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKC 418          
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: A0A8C7UVR3_ONCMY (Crooked neck pre-mRNA splicing factor 1 n=3 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7UVR3_ONCMY)

HSP 1 Score: 295 bits (755), Expect = 9.830e-91
Identity = 227/376 (60.37%), Postives = 270/376 (71.81%), Query Frame = 1
Query:   16 KQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            K FED IR+ R  I  W+KYA WEES KE++R+RSIYERALDVD ++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLG     R VFERW EWEP++ AW +++ FE+R                       XXXXXXXXXXXXXXXXXXXXX     E    E   E L VAFA FEE+ KE +R RVIYKYALD+  ++Q  EL + +  FEK+ G    IE+ +V+KRR QYEEEV A PH+YDAWFDY+RL ES AD    REVYERAIAN+PP+ EKR WRRY+ LW+ YA++EEL+  D  R + VY ACL +IPH+ FTF KMWLL  +  +R+K+L AAR+ LGTAIG+C
Sbjct:   67 KGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGNIAGCRQVFERWTEWEPEEQAWHSYINFELRYKEVDKARSIYERYILLMGSNWIXXXXXXXXXXXXXXXXXXXXXS---VEFFGEEHVDEHLFVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKFYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIPPIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYLACLDLIPHKKFTFAKMWLLYGQFEIRQKNLQAARQGLGTAIGKC 439          
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Match: A0A7S3XNW0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNW0_HETAK)

HSP 1 Score: 293 bits (749), Expect = 2.960e-90
Identity = 255/376 (67.82%), Postives = 285/376 (75.80%), Query Frame = 1
Query:   16 KQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDFKSQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGEADKARCVFERWMEWEPDDNAWTAFVKFEMRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAELPEGEGRGERLLVAFAEFEERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAVVAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVPPVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTFGKMWLLLAKLHVREKDLAAARKTLGTAIGRC 1143
            K+FED IRRQRQH+GTW KYA WEESQKE ER+RSIYERALDVDFKS S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            ERWM WEPDDNA           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ EL EGE RGE+L  A                   +ALDQ  RE++PEL++AF++FEK+HG    IEE ++ KRRLQYEE V+A P DYDAWFDY+RLEE+   L + REVYERAIA VPP AEKRFWRRY+ LW+ YA+FEELQA D  RA+ V+ ACL  IPHE F+F K+W+L A L +R KDL AAR+ LG A+GRC
Sbjct:   62 KEFEDSIRRQRQHLGTWHKYAKWEESQKEYERARSIYERALDVDFKSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERWMRWEPDDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALRELEEGE-RGEKLYAAXXXXXXXXXXXXXXXXXXXFALDQMRREEVPELYQAFLSFEKQHGNREGIEEVIINKRRLQYEEAVSASPLDYDAWFDYVRLEEAEGTLEQAREVYERAIAQVPPRAEKRFWRRYIYLWINYALFEELQAQDQDRAREVFRACLAAIPHEAFSFAKVWVLAADLELRRKDLGAARRLLGQALGRC 436          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8098.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC4_ECTSI2.350e-10471.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZA95_9STRA2.030e-10070.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CYM6_9STRA2.660e-9658.51Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
H3CZE3_TETNG4.940e-9360.64Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Te... [more]
A0A3Q3XBL9_MOLML8.380e-9259.31Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Mo... [more]
W5NJR9_LEPOC6.330e-9153.99Crooked neck pre-mRNA splicing factor 1 n=2 Tax=Le... [more]
A0A6A7G2M1_9CRUS7.470e-9152.76Crooked neck-like protein 1 n=1 Tax=Hirondellea gi... [more]
A0A8C0YJZ9_CYPCA9.190e-9154.13Crooked neck pre-mRNA splicing factor 1 n=2 Tax=Cy... [more]
A0A8C7UVR3_ONCMY9.830e-9160.37Crooked neck pre-mRNA splicing factor 1 n=3 Tax=On... [more]
A0A7S3XNW0_HETAK2.960e-9067.82Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8098contigP-wetherbeei_contig8098:110..2896 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LLC4
Preferred nameCRNKL1
PFAMsHAT,Suf,TPR_8
Model size1143
Max annot lvl2759|Eukaryota
KEGG koko:K12869
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0071007,GO:0071010,GO:0071011,GO:0071012,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
Exons6
Evalue3.85e-105
EggNOG OGsKOG1915@1|root,KOG1915@2759|Eukaryota
Descriptionspliceosomal complex assembly
Cds size1143
COG categoryS
BRITEko00000,ko00001,ko00002,ko03036,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8098.1.1prot_P-wetherbeei_contig8098.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8098 110..2896 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187019.916793-CDS-P-wetherbeei_contig8098:109..3851683187019.916793-CDS-P-wetherbeei_contig8098:109..385Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8098 110..385 +
1683187019.9287615-CDS-P-wetherbeei_contig8098:789..9861683187019.9287615-CDS-P-wetherbeei_contig8098:789..986Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8098 790..986 +
1683187019.9483063-CDS-P-wetherbeei_contig8098:1317..15041683187019.9483063-CDS-P-wetherbeei_contig8098:1317..1504Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8098 1318..1504 +
1683187019.9626355-CDS-P-wetherbeei_contig8098:1877..20771683187019.9626355-CDS-P-wetherbeei_contig8098:1877..2077Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8098 1878..2077 +
1683187019.9730616-CDS-P-wetherbeei_contig8098:2374..25371683187019.9730616-CDS-P-wetherbeei_contig8098:2374..2537Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8098 2375..2537 +
1683187019.9820938-CDS-P-wetherbeei_contig8098:2776..28961683187019.9820938-CDS-P-wetherbeei_contig8098:2776..2896Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8098 2777..2896 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8098.1.1

>prot_P-wetherbeei_contig8098.1.1 ID=prot_P-wetherbeei_contig8098.1.1|Name=mRNA_P-wetherbeei_contig8098.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=381bp
RNNTTKQFEDGIRRQRQHIGTWMKYAAWEESQKEIERSRSIYERALDVDF
KSQSLWLRYAEMEMRNKFVNHARNIWDRAVTLLPRVDQFWYKYAYMEEML
GEADKARCVFERWMEWEPDDNAWTAFVKFEMRRQQPQRARAVLERYATSR
PSARSFLKWAKWEEQQGQLALARAVYERAVAELPEGEGRGERLLVAFAEF
EERCKEDDRARVIYKYALDQGTREQMPELHRAFVAFEKRHGGVGDIEEAV
VAKRRLQYEEEVAADPHDYDAWFDYIRLEESGADLGRIREVYERAIANVP
PVAEKRFWRRYVLLWVGYAVFEELQAGDVHRAKAVYSACLRVIPHETFTF
GKMWLLLAKLHVREKDLAAARKTLGTAIGRC
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mRNA from alignment at P-wetherbeei_contig8098:110..2896+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8098.1.1 ID=mRNA_P-wetherbeei_contig8098.1.1|Name=mRNA_P-wetherbeei_contig8098.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2787bp|location=Sequence derived from alignment at P-wetherbeei_contig8098:110..2896+ (Phaeothamnion wetherbeei SAG_119_79)
CGCAACAACACAACGAAACAGTTCGAGGACGGGATCCGGCGGCAGCGGCA GCACATCGGGACGTGGATGAAGTATGCGGCGTGGGAGGAGTCGCAGAAGG AGATCGAGCGCAGCCGCTCCATCTACGAGCGGGCGCTCGATGTCGACTTC AAGTCGCAGTCGCTATGGCTGCGCTACGCCGAGATGGAGATGCGCAACAA GTTTGTCAACCACGCCCGCAACATCTGGGACCGCGCCGTCACGCTCCTGC CGCGCGTCGACCAATTCTGGTACAAGGTGTGTGAAGGAAGGAAGGAAGGC GTCTCGTGCAGCACCACTGGGGATGCAGACGGCGTTTTATTATGTGGCGT GCCGGGGAAAGCAGGCGTGTCGGATTGCGTAATCAAGTGTTTAGGGCGGC GTTAGCAGGCGTATGGCCTGGCTTTCATCCGATGTTTGTCTGCCCTATTC GCCGCTATGCCCTACTAGCTGCCAGAATCACTGTCGCCGTTGATGGCGCC GACGCCACCGAAGCCGCCGTCGTTGTCACCTTCACCGCCGCCGCCGCCAC CGCCACCAGGTGCTCCGTTTCCCGCTTCCGCTGCCTGCGGGGCTGCCCTT TTCTCGGCCAACTGTATCTTTAAAACATCCTATTTTCTTCTTCTCTTCCC CGCCATTTCTTCCTCTCTCCCCGCCCTAAGTATGCGTACATGGAGGAAAT GCTGGGCGAAGCGGATAAGGCCCGCTGCGTGTTCGAACGGTGGATGGAGT GGGAGCCCGACGACAACGCCTGGACTGCCTTCGTCAAGTTCGAGATGCGC CGCCAGCAGCCGCAGCGCGCCCGCGCCGTGCTCGAGCGATACGCCACAAG TCGACCTTCGGCGCGCTCCTTCCTCAAGTGAGTTAATATAGGTCAATGGT TTGGTTGGTCGGTTGGTCAGTTGGATCATGTGCCGGCCGGTACCGCTGGG AGTTATTGCGCGGTTTCATGTCGTATCTATACGTGCATCTCTTTCTGTTG GACAGCGATCTAGCGTGATGGCGGGTTCCTCTGGTCGCTGCAGGGCAATA TAAGAAAACGGTCGGTTGTTGTTGTGTACTTTCATCCATCACCAGTTGTC TGCACTACATTCGGCTGAGGCGCTCTTGACGACCCTGTTTGCTCATCGCT TACGAACCGCTCAATCAATTCAGTCTCAATCCATCGAACAACTTCCGACC ATTCCCAGGTGGGCCAAGTGGGAGGAGCAGCAGGGCCAGCTGGCGCTGGC ACGGGCTGTGTACGAGCGCGCCGTGGCCGAGCTGCCCGAAGGGGAAGGTC GCGGCGAGCGGCTTCTGGTCGCCTTCGCCGAGTTCGAGGAGCGCTGCAAG GAGGACGACCGCGCCCGCGTCATCTACAAGTACGCCCTCGACCAGGTCAG CAGGACTGTAATGACAGCTGTGCGATACTGGCTGGGAGGCAGAAATAGGT CGGCAGGGTACGGCTCCGGTATGGCTCCGGCAATGTAAGTTGCGGCGGCT ACTATGTGATGCAAGTCAGGTGGCCGGCCCACCCGCCGCCATGCGGCCGG GGCGGATCGTCGCTCTGCGACGACGGGGGGCTGTGCCGGCGGTTTGGTTG GGATTCAATGGTGGTACTTGATTCTCGTTCATTTCGTCTTGACGCACGCC CGCAGGTATGATTTGGCTCCTTCTCACTCGGCGTGGCCGTAGCTACCCTC CTCTGACTCCTACTGACCCTTTCTCTTGGCCCTCTCCTGCCTGTCCGCCT ACTGTTGACTCTTGACAGGGCACGCGGGAGCAGATGCCCGAGTTGCACCG CGCCTTCGTGGCGTTCGAGAAACGGCATGGCGGGGTGGGCGACATTGAGG AGGCCGTCGTGGCCAAGCGGCGGCTGCAGTACGAGGAGGAGGTGGCGGCC GACCCCCACGACTACGACGCCTGGTTCGACTACATCCGACTCGAGGAGTC CGGCGCCGACCTCGGCAGGTACTAGCATGAGACGTGTCATGTTCCATTCA CATGACGGGTCCGGCCGTTTATATTCCGTCCGTTTCGAGTGAGGCCATTT TCGGTTTTGGGGGTCGTGCGGTAGGTTCCTTTCGAAATTAGGCGATTCCT CTCAAGACAGTTGCTTCGCCGCCGTTTCCGGTTGGACTGCTTGGAGGGAG GCTAGGAAGATTTTTTGTGCTTCTTCTCCGGCCGTGCCAATCGTAATTGA CCTTGCTGTGCTTCCTCCTTCTCCCTCCTTTGCTTTATCTGTGTCTCACC TCCCTCAAAAACCAGGATCCGGGAAGTGTATGAGCGGGCCATCGCCAACG TGCCGCCGGTGGCGGAGAAGCGGTTCTGGCGGCGCTACGTGCTGCTGTGG GTGGGGTACGCCGTCTTCGAGGAGCTGCAGGCCGGCGATGTCCACCGTGC CAAGGCCGTCTACAGCGCCTGTCTCCGGGTCAGTCAGTCTGCCTATGGTC CCTCAGTTCTTCCCGCCTTCTGTCGTTCTTCCGTCTTCTGCTTCGCCGTC GGTGGGGCGGCAACGGCGGCAGTTTTGCTTGTATTGCAGGTGCTGGCGAT TGTTGGGCATGATTGCTTTCTAGTGCTACTGGCGCTTCTCTGGAAAACGT GGATGCAATGCCTAAACCATCGTGCGATGGGCCTTTTCTGCGCCTCCCAT CCGGTTCGTTTGGACAGGTGATCCCGCACGAGACCTTCACGTTTGGCAAG ATGTGGTTGCTGCTGGCCAAGCTGCATGTGCGGGAGAAGGACCTCGCGGC CGCCCGCAAGACCCTCGGGACGGCCATCGGCCGCTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8098:110..2896+

>mRNA_P-wetherbeei_contig8098.1.1 ID=mRNA_P-wetherbeei_contig8098.1.1|Name=mRNA_P-wetherbeei_contig8098.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1143bp|location=Sequence derived from alignment at P-wetherbeei_contig8098:110..2896+ (Phaeothamnion wetherbeei SAG_119_79)
CGCAACAACACAACGAAACAGTTCGAGGACGGGATCCGGCGGCAGCGGCA
GCACATCGGGACGTGGATGAAGTATGCGGCGTGGGAGGAGTCGCAGAAGG
AGATCGAGCGCAGCCGCTCCATCTACGAGCGGGCGCTCGATGTCGACTTC
AAGTCGCAGTCGCTATGGCTGCGCTACGCCGAGATGGAGATGCGCAACAA
GTTTGTCAACCACGCCCGCAACATCTGGGACCGCGCCGTCACGCTCCTGC
CGCGCGTCGACCAATTCTGGTACAAGTATGCGTACATGGAGGAAATGCTG
GGCGAAGCGGATAAGGCCCGCTGCGTGTTCGAACGGTGGATGGAGTGGGA
GCCCGACGACAACGCCTGGACTGCCTTCGTCAAGTTCGAGATGCGCCGCC
AGCAGCCGCAGCGCGCCCGCGCCGTGCTCGAGCGATACGCCACAAGTCGA
CCTTCGGCGCGCTCCTTCCTCAAGTGGGCCAAGTGGGAGGAGCAGCAGGG
CCAGCTGGCGCTGGCACGGGCTGTGTACGAGCGCGCCGTGGCCGAGCTGC
CCGAAGGGGAAGGTCGCGGCGAGCGGCTTCTGGTCGCCTTCGCCGAGTTC
GAGGAGCGCTGCAAGGAGGACGACCGCGCCCGCGTCATCTACAAGTACGC
CCTCGACCAGGGCACGCGGGAGCAGATGCCCGAGTTGCACCGCGCCTTCG
TGGCGTTCGAGAAACGGCATGGCGGGGTGGGCGACATTGAGGAGGCCGTC
GTGGCCAAGCGGCGGCTGCAGTACGAGGAGGAGGTGGCGGCCGACCCCCA
CGACTACGACGCCTGGTTCGACTACATCCGACTCGAGGAGTCCGGCGCCG
ACCTCGGCAGGATCCGGGAAGTGTATGAGCGGGCCATCGCCAACGTGCCG
CCGGTGGCGGAGAAGCGGTTCTGGCGGCGCTACGTGCTGCTGTGGGTGGG
GTACGCCGTCTTCGAGGAGCTGCAGGCCGGCGATGTCCACCGTGCCAAGG
CCGTCTACAGCGCCTGTCTCCGGGTGATCCCGCACGAGACCTTCACGTTT
GGCAAGATGTGGTTGCTGCTGGCCAAGCTGCATGTGCGGGAGAAGGACCT
CGCGGCCGCCCGCAAGACCCTCGGGACGGCCATCGGCCGCTGC
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