mRNA_P-wetherbeei_contig8093.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8093.1.1
Unique NamemRNA_P-wetherbeei_contig8093.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: A0A7S1UAC9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAC9_9STRA)

HSP 1 Score: 154 bits (390), Expect = 4.400e-41
Identity = 89/175 (50.86%), Postives = 122/175 (69.71%), Query Frame = 1
Query:   67 GATAAAASSTGAAEEPPVSISSLRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKARDLYEAAIEHTAAAPALLMEKA 591
            GA A AAS  GA E+P  S+  LRSSA+ A+T+G+ DEA+ L+ +V  LEP NERNYYKRFRVY  +R+Y++A++DL KAL++KP YK  LAQRA++LR+VG C AS+ADY  L +LDP +KD+GE +P  + C    + A  ++R  +W    D   AA+E T AA  + ME+A
Sbjct:   13 GALALAASPGGAEEKPAQSVGKLRSSADAAVTEGKLDEAVKLYGQVIRLEPGNERNYYKRFRVYQRQRKYREALNDLNKALEMKPEYKACLAQRARVLRVVGKCEASLADYEKLGKLDPEHKDLGE-VPRVRQCAQQSRAAASAQRAGNWRAVVDHLSAAMEVTEAADGMHMERA 186          
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: A0A6T5P1C6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5P1C6_HETAK)

HSP 1 Score: 141 bits (356), Expect = 4.290e-36
Identity = 76/159 (47.80%), Postives = 107/159 (67.30%), Query Frame = 1
Query:  133 LRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKARDLYEAAIEHTAAAPALLMEKARCSWHL 609
            LR+SAE A   GE ++AL LFS+V ++EP NERNYYKRFRVYL++R+Y++A+SDLT AL+IKP YK ALAQRAKL R+                 DP +K++G+G   +Q C  A++ AE++ RRRDW  A+D  +AA++ T  A  L + KA+  + +
Sbjct:   61 LRASAETAFASGESEQALLLFSKVIQIEPKNERNYYKRFRVYLSQRKYREAVSDLTAALEIKPSYKVALAQRAKLHRLXXXXXXXXXXXXXXXXXDPNSKELGDGYEAAQLCAKAIKTAEEAARRRDWRVAKDQLQAALDLTEVAHDLHVRKAQVCYEM 219          
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: A0A024GLT4_9STRA (J domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GLT4_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.990e-29
Identity = 70/160 (43.75%), Postives = 103/160 (64.38%), Query Frame = 1
Query:  124 ISSLRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKARD-LYEAAIEHTAAAPALLMEKARCS 600
            IS LR +AENA   G HD+A+ L S++ ELEP NERNY+KR+R YL++R+Y  A++DLT AL + P +KQ + QR KL  ++G CS +V ++  L QL P ++   E    S  C D + QAE+++ R D+  A + L E   + T ++  LLME+A+ S
Sbjct:   25 ISKLRIAAENAFADGSHDKAIDLISKLIELEPKNERNYFKRYRAYLSQRKYNSALNDLTLALKVNPEFKQGVNQRGKLYFILGQCSDAVQEFERLMQLSPDDEAAKESHQKSVRCVDNIDQAERAQSRGDYQSAYNYLSEILDDPTVSSNTLLMERAQLS 184          
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: K3W9F2_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9F2_GLOUD)

HSP 1 Score: 122 bits (306), Expect = 4.100e-29
Identity = 66/161 (40.99%), Postives = 103/161 (63.98%), Query Frame = 1
Query:  121 SISSLRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKARDLYEAAIEHTAAAPA-LLMEKARCS 600
            S+S +R +AENA   G+  +A++L S++ ELEP NERN+YKR+R YL++R+Y  A+SDLT +L + PGYKQ ++QR KLL M+G CS ++ D+  + +L P +    + +  S  C   + +A KS+ R D+  A       +E TA +   LL+E+A+ S
Sbjct:   29 SVSKVRVAAENAFAGGDMKKAISLLSKLIELEPSNERNFYKRYRAYLSERKYSHALSDLTSSLTVNPGYKQGISQRGKLLMMLGQCSDAIYDFQKIVELYPTDASAQQSLEKSTQCASYIDEAGKSQSRGDYASAHAYLTQVLEGTAVSSVPLLLERAQLS 189          
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: F0WHI7_9STRA (Uncharacterized protein AlNc14C101G6050 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHI7_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.090e-28
Identity = 67/160 (41.88%), Postives = 103/160 (64.38%), Query Frame = 1
Query:  124 ISSLRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKARD-LYEAAIEHTAAAPALLMEKARCS 600
            I  LR +AENA   G HD+A+ LF+R+ +LEP NERNY+KR+R YL++R+Y  A+SDLT AL++ P +KQ + QR KL  ++G CS ++ ++  L Q  P ++   E    S  C + + QAE+++ R D+  A + L E   + T ++  LLME+A+ S
Sbjct:   29 IPKLRIAAENAFADGSHDKAIDLFTRLIQLEPKNERNYFKRYRAYLSQRKYNSALSDLTLALEVNPEFKQGINQRGKLYFILGQCSDAIKEFERLMQFSPNDEAAKESHEKSTRCVENIDQAERAQSRGDYQSAYNHLSEILDDPTISSNTLLMERAQLS 188          
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: V9EQH9_PHYPR (J domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9EQH9_PHYPR)

HSP 1 Score: 118 bits (295), Expect = 1.390e-27
Identity = 67/171 (39.18%), Postives = 106/171 (61.99%), Query Frame = 1
Query:   91 STGAAEEPPVSISSLRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKARDLYEAAIEHTAAAPA-LLMEKARCS 600
            ST  AE  P S++ +R +A+NA   G+   A++L S++ ELEP NERN+YKRFR YL++R+Y  A+SDL+ +LD+ P YKQ   QR KLL M+G C+ +  D+  + +L P +    E +  S+ C   + +AE++  R D+  A +     +E +A +   LL+E+A+ S
Sbjct:   16 STNFAEANPDSVAKVRVAADNAFAGGDMKTAISLLSKLIELEPKNERNFYKRFRAYLSERKYSHALSDLSSSLDVNPKYKQGRLQRGKLLMMLGQCAEASQDFQTVVELYPKDSASAEQLDKSKECASYIDEAERAHSRGDYQSAYNYLSQVLEGSAISSVPLLLERAQLS 186          
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: A0A833WH03_PHYIN (DnaJ domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WH03_PHYIN)

HSP 1 Score: 115 bits (288), Expect = 1.030e-26
Identity = 66/170 (38.82%), Postives = 103/170 (60.59%), Query Frame = 1
Query:   94 TGAAEEPPVSISSLRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKARDLYEAAIEHTAAAPA-LLMEKARCS 600
            T  AE  P S++ +R +A+NA   G+   A+ L S++ ELEP NERN+YKRFR YL++R+Y  A+SDL+ +LD+ P YKQ   QR KLL M+G C+ +  D+  + +L P      E +  S+ C   + +AE++  R D+  A +     +E +A +   LL+E+A+ S
Sbjct:   17 TNLAEANPDSVAKVRVAADNAFAGGDMKTAITLLSKLIELEPRNERNFYKRFRAYLSERKYSHALSDLSSSLDVNPKYKQGRLQRGKLLMMLGQCAEASQDFQTVVELYPKEATGAEQLDKSKECASNIDEAERAHTRGDYQSAYNYLTQVLEGSAISSVPLLLERAQLS 186          
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: A0A1V9ZSE5_9STRA (J domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSE5_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.700e-26
Identity = 67/168 (39.88%), Postives = 102/168 (60.71%), Query Frame = 1
Query:  100 AAEEPPVSISSLRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKA-RDLYEAAIEHTAAAPALLMEKARCS 600
            A+  P   +S L+ + ENA   G+  +A++LFS+V ++EP NER YYKR+R YL+ R+Y  A++DLT A+  KP Y Q   QR +L  M+G+C+ +++D+ A+  LDP N    E +  S+ C   L+ A  +K+R DW  A R L EA   H  ++  LL+ +A  S
Sbjct:   14 ASAAPKSDVSKLQVAGENAFASGDLKKAISLFSQVIDIEP-NERVYYKRYRAYLSDRKYGAALADLTAAVQYKPTYTQGFLQRGRLNMMIGNCADAMSDFTAVLSLDPKNGPASESLDKSRECAQLLEDASAAKQRGDWTSAHRFLSEAIDAHAISSSQLLLMRAEIS 180          
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: A0A0W8DFU2_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DFU2_PHYNI)

HSP 1 Score: 116 bits (290), Expect = 1.710e-26
Identity = 65/167 (38.92%), Postives = 104/167 (62.28%), Query Frame = 1
Query:  103 AEEPPVSISSLRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKARDLYEAAIEHTAAAPA-LLMEKARCS 600
            AE  P S++ +R +A+NA   G+   A++L S++ ELEP NERN+YKRFR YL++R+Y  A+SDL+ +LD+ P YKQ   QR KLL M+G C+ +  D+  + +L P +    E +  S+ C   + +AE++  R D+  A +     +E +A +   LL+E+A+ S
Sbjct:  467 AEANPDSVAKVRVAADNAFAGGDMKTAISLLSKLIELEPKNERNFYKRFRAYLSERKYSHALSDLSSSLDVNPKYKQGRLQRGKLLMMLGQCAEASQDFQTVVELYPKDSASAEQLDKSKECASYIDEAERAHSRGDYQSAYNYLSQVLEGSAISSVPLLLERAQLS 633          
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Match: A0A6G0XX48_9STRA (J domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX48_9STRA)

HSP 1 Score: 113 bits (283), Expect = 7.020e-26
Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = 1
Query:   70 ATAAAASSTGAAEEPPVSISSLRSSAENALTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKALDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPLSQACKDALQQAEKSKRRRDWVKARDLYEAAIE-HTAAAPALLMEKARCSWHL 609
            A AAAA  +GAA  P V +  L  +AENA   G+  +A++L+S+V EL+P NER YYKR+R YL+ R+Y  A++DLT A++IKP Y Q   QR +L  M+G C  +V D+  +  LDP N    E +  S+ C   L  A  +++  ++  A       I+ H  ++P+LL+ +A  +  L
Sbjct:   18 AAAAAALVSGAANAPKVDVGKLTIAAENAFASGDMKKAISLYSQVIELDP-NERVYYKRYRAYLSDRKYSSALADLTSAVEIKPTYTQGFLQRGRLRMMIGQCYEAVDDFVKVVALDPNNAAGNENLAKSRDCAQHLGYATDAQKSGNFANAVQYLSHVIDKHAVSSPSLLLLRAELNGQL 197          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8093.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1UAC9_9STRA4.400e-4150.86Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6T5P1C6_HETAK4.290e-3647.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A024GLT4_9STRA3.990e-2943.75J domain-containing protein n=2 Tax=Albugo candida... [more]
K3W9F2_GLOUD4.100e-2940.99J domain-containing protein n=1 Tax=Globisporangiu... [more]
F0WHI7_9STRA1.090e-2841.88Uncharacterized protein AlNc14C101G6050 n=1 Tax=Al... [more]
V9EQH9_PHYPR1.390e-2739.18J domain-containing protein n=12 Tax=Phytophthora ... [more]
A0A833WH03_PHYIN1.030e-2638.82DnaJ domain n=1 Tax=Phytophthora infestans TaxID=4... [more]
A0A1V9ZSE5_9STRA1.700e-2639.88J domain-containing protein n=1 Tax=Achlya hypogyn... [more]
A0A0W8DFU2_PHYNI1.710e-2638.92Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A6G0XX48_9STRA7.020e-2638.67J domain-containing protein n=1 Tax=Aphanomyces eu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8093contigP-wetherbeei_contig8093:153..1042 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog65071.PYU1_T001593
PFAMsDnaJ
Model size609
Max annot lvl121069|Pythiales
Hectar predicted targeting categorysignal peptide
Exons2
Evalue6.31e-30
EggNOG OGsCOG0484@1|root,KOG0624@2759|Eukaryota,1ME4R@121069|Pythiales
DescriptionDnaJ molecular chaperone homology domain
Cds size603
COG categoryV
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187019.6820192-CDS-P-wetherbeei_contig8093:152..2751683187019.6820192-CDS-P-wetherbeei_contig8093:152..275Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8093 153..275 -
1683187019.6912403-CDS-P-wetherbeei_contig8093:556..10361683187019.6912403-CDS-P-wetherbeei_contig8093:556..1036Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8093 557..1036 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187019.7033806-UTR-P-wetherbeei_contig8093:1036..10421683187019.7033806-UTR-P-wetherbeei_contig8093:1036..1042Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8093 1037..1042 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8093.1.1prot_P-wetherbeei_contig8093.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8093 153..1036 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8093.1.1

>prot_P-wetherbeei_contig8093.1.1 ID=prot_P-wetherbeei_contig8093.1.1|Name=mRNA_P-wetherbeei_contig8093.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp
MRVVHVFILVQYASMPLLFAGATAAAASSTGAAEEPPVSISSLRSSAENA
LTKGEHDEALALFSRVCELEPMNERNYYKRFRVYLTKRRYKDAISDLTKA
LDIKPGYKQALAQRAKLLRMVGDCSASVADYAALQQLDPGNKDMGEGIPL
SQACKDALQQAEKSKRRRDWVKARDLYEAAIEHTAAAPALLMEKARCSWH
L
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mRNA from alignment at P-wetherbeei_contig8093:153..1042-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8093.1.1 ID=mRNA_P-wetherbeei_contig8093.1.1|Name=mRNA_P-wetherbeei_contig8093.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=890bp|location=Sequence derived from alignment at P-wetherbeei_contig8093:153..1042- (Phaeothamnion wetherbeei SAG_119_79)
GTCGTCATGCGGGTCGTCCACGTCTTTATCCTCGTGCAATACGCGTCCAT GCCTCTCCTGTTCGCCGGAGCAACCGCGGCCGCCGCATCGTCAACGGGAG CAGCGGAAGAGCCTCCAGTCAGCATTTCGTCGCTCCGGAGTTCCGCTGAG AACGCGTTGACGAAAGGCGAGCACGACGAGGCCCTCGCCCTCTTCTCGCG CGTCTGCGAGCTCGAGCCGATGAACGAGCGCAACTACTACAAGCGCTTCC GCGTCTACCTGACGAAGAGAAGGTACAAGGACGCAATCAGCGATCTCACC AAGGCACTGGACATCAAGCCGGGCTACAAGCAGGCTCTGGCGCAGCGCGC GAAGCTGCTCCGCATGGTGGGAGATTGCAGCGCGTCAGTCGCGGATTACG CGGCGCTGCAGCAACTCGACCCGGGCAACAAGGACATGGGCGAGGGCATT CCGCTCTCGCAGGCTTGCAAAGACGCATTGCAGCAGGTGAGCGGCCCGGG AGTAGGCGTCGCATCATGCAACCAGTTCTTCGCCCTTTTGGCACCATCTT TTCCTATGGATAAGAGGTCTACTGGTGATGCCCTGAGTGATGTAGCGATG CCTGCAAGTGGGAAGATGTTTCTCTCTTCTGTCCATATGCCTGCCAGCAA AAGCTATTTGAACCTGCCTAACCCGCCTGTAAACTCAGTCTTTTGCGTGA CGACGGCATTGTTGTAATTCGACTGGGGGCTGTTTTTTGGTTGATTGGTT TGTCGACTGCCAATCAGGCGGAAAAATCGAAGCGGCGGCGGGATTGGGTG AAGGCCCGCGATCTCTACGAAGCGGCAATCGAGCACACGGCGGCGGCACC CGCGCTGCTGATGGAGAAGGCGAGGTGCTCGTGGCACCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8093:153..1042-

>mRNA_P-wetherbeei_contig8093.1.1 ID=mRNA_P-wetherbeei_contig8093.1.1|Name=mRNA_P-wetherbeei_contig8093.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig8093:153..1042- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGGTCGTCCACGTCTTTATCCTCGTGCAATACGCGTCCATGCCTCT
CCTGTTCGCCGGAGCAACCGCGGCCGCCGCATCGTCAACGGGAGCAGCGG
AAGAGCCTCCAGTCAGCATTTCGTCGCTCCGGAGTTCCGCTGAGAACGCG
TTGACGAAAGGCGAGCACGACGAGGCCCTCGCCCTCTTCTCGCGCGTCTG
CGAGCTCGAGCCGATGAACGAGCGCAACTACTACAAGCGCTTCCGCGTCT
ACCTGACGAAGAGAAGGTACAAGGACGCAATCAGCGATCTCACCAAGGCA
CTGGACATCAAGCCGGGCTACAAGCAGGCTCTGGCGCAGCGCGCGAAGCT
GCTCCGCATGGTGGGAGATTGCAGCGCGTCAGTCGCGGATTACGCGGCGC
TGCAGCAACTCGACCCGGGCAACAAGGACATGGGCGAGGGCATTCCGCTC
TCGCAGGCTTGCAAAGACGCATTGCAGCAGGCGGAAAAATCGAAGCGGCG
GCGGGATTGGGTGAAGGCCCGCGATCTCTACGAAGCGGCAATCGAGCACA
CGGCGGCGGCACCCGCGCTGCTGATGGAGAAGGCGAGGTGCTCGTGGCAC
CTG
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