mRNA_P-wetherbeei_contig8091.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8091.2.1
Unique NamemRNA_P-wetherbeei_contig8091.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: A0A3C0TV43_9PROT (Ribonuclease D n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TV43_9PROT)

HSP 1 Score: 565 bits (1455), Expect = 5.170e-200
Identity = 278/382 (72.77%), Postives = 316/382 (82.72%), Query Frame = 1
Query:    1 MKVITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGPSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAMKGNKIILVPV 1146
            M +IT T  L   C+RL+ +PY+TVDTEFLREKTFWPKLCL+QIA PE+E +IDPL   +DL+P +DLM ++ VLKVFHAARQD+EIFHHD GVIP PMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWS RPLSERQL YA+QDVTHLRGVYEWLAR+L KN REAWL+EEMA L+DP TY++ P EAW RIKTRGGNRRFLGVLREI AWRE EAQAR+LPR+R+IR+EALLEIAAHPP TL  +G++R VT+GFA+GKLG  LL AI  G ++PE  LP LPDR    P  G  VELLKVLLKI CE  GVAS+LVA S DL  IA DD A V A+ GWRR++FG AALDLKHG+LAIA+K  KI+L PV
Sbjct:    1 MNLITSTQPLAQLCSRLSQSPYVTVDTEFLREKTFWPKLCLIQIASPEEEAMIDPLGTEIDLTPFFDLMRDSRVLKVFHAARQDIEIFHHDAGVIPTPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSSRPLSERQLAYALQDVTHLRGVYEWLARQLKKNGREAWLAEEMAILSDPNTYISHPEEAWRRIKTRGGNRRFLGVLREIAAWREKEAQARNLPRNRIIREEALLEIAAHPPQTLEALGRLRHVTTGFAEGKLGKPLLDAIARGRDIPEDALPELPDRGGRPPGNGSVVELLKVLLKILCEDQGVASRLVAGSDDLAHIAADDHAPVAALQGWRRQIFGDAALDLKHGKLAIAIKKGKIVLTPV 382          
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: A0A3D3UJS6_9PROT (Ribonuclease D n=8 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UJS6_9PROT)

HSP 1 Score: 506 bits (1302), Expect = 9.990e-177
Identity = 248/380 (65.26%), Postives = 300/380 (78.95%), Query Frame = 1
Query:    1 MKVITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGPSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAMKGNKIILV 1140
            M+VITDT  L+ CC RLA A +ITVDTEF+R+KT+WP+LCL+QIAGPEDELI+DPLA G+DL+P Y LMA  +V KVFHAARQDVEIF H+G  IP P+FDTQVAAMVCGFGDS+GYD LARKI  V IDKSSRFSDW+ RPL+ERQL YA+QDVTHLR VYEWL  +L +N R  WL EEMA LT P TY   P  AWLRIK RG NRRFLGVL+ + AWRE  AQ RD+PR+RV+RDEAL+EIA HPP ++ E+G +R+V  G A+G+LG +LLAAI  GV L EA+LP LP + A   + G  VEL+KVLLK +CE+ GVA +LVA++ DL+ IA DD+A VPA+ GWR E+FG AAL+LKHG+LA+A  G K+ L+
Sbjct:    1 MRVITDTAALSDCCNRLAKAEFITVDTEFIRDKTYWPRLCLIQIAGPEDELIVDPLADGIDLAPFYWLMAQESVTKVFHAARQDVEIFFHEGQTIPTPLFDTQVAAMVCGFGDSIGYDNLARKILNVRIDKSSRFSDWARRPLTERQLNYAIQDVTHLRHVYEWLHTKLDENGRSHWLQEEMAILTAPSTYEMHPENAWLRIKARGANRRFLGVLKHVAAWREQAAQDRDIPRNRVLRDEALVEIAGHPPKSIKELGDLRNVPKGVAEGRLGQALLAAILEGVALDEAELPTLPKKPAVTTNNGSLVELMKVLLKRQCEEAGVAPRLVANATDLELIAADDNAPVPALSGWRYELFGQAALNLKHGKLALAANGRKVRLI 380          
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: A0A2U1WNB7_9PROT (Ribonuclease D n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1WNB7_9PROT)

HSP 1 Score: 482 bits (1240), Expect = 2.840e-167
Identity = 237/381 (62.20%), Postives = 296/381 (77.69%), Query Frame = 1
Query:    1 MKVITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGPSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAMKGNKIILVP 1143
            M +IT T +L A C  LA A YITVDTEFLREKTF+P+LCLVQ+AGP+    IDPLA GMDL+PL +L+ + A+LKVFHAARQDVEIF+H  G IP P+FDTQVAAMVCGFGDSVGY+TL  K++   IDKSSRF+DWS RPL++RQL+YA+ DVTHLR  YE L R LHK  RE WL EEMA LTDP TY ++P  AW+R+K R    RFL VL+E+ AWRE EAQ RDLPRSRV+RDEA+LEIAAH P T+ ++ + R +  GFA+G+ G  +LAA++  ++LPE++LP L  R+ P       VELL+VLLK+KC+++ VASKLVAS++DL+ IA DDDADVPA+HGWRREMFG  AL LKHGR+A+A+   ++ +VP
Sbjct:    1 MTLITTTSDLAAFCRDLAGADYITVDTEFLREKTFYPQLCLVQVAGPKSAAAIDPLAEGMDLAPLIELLNDPAILKVFHAARQDVEIFYHLTGKIPHPLFDTQVAAMVCGFGDSVGYETLVTKLAGARIDKSSRFTDWSQRPLTDRQLQYALSDVTHLRPAYEKLRRRLHKTGREHWLEEEMAVLTDPATYESDPETAWMRLKVRTNKPRFLAVLKELAAWREREAQRRDLPRSRVLRDEAMLEIAAHAPTTVDDLARTRGMGRGFAEGRQGADVLAAVQRALDLPESELPRLEPREEPPQGIAPIVELLRVLLKMKCDENHVASKLVASASDLEAIAADDDADVPALHGWRREMFGNDALALKHGRIALAILDRRVRIVP 381          
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: UPI001F267FCB (ribonuclease D n=1 Tax=Zavarzinia compransoris TaxID=1264899 RepID=UPI001F267FCB)

HSP 1 Score: 478 bits (1231), Expect = 6.840e-166
Identity = 239/377 (63.40%), Postives = 296/377 (78.51%), Query Frame = 1
Query:   10 ITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGPSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAMKGNKIILV 1140
            ITDT  LTA   RL  A Y+TVDTEFLR+ T+WPKLCLVQ+AGP+   IIDPLAP +DL PL DLMA+  VLKVFHAARQD+EIF    G IP+P+FDTQVAAMVCG+GDSV Y+TL  KI++  +DKSSRF+DW+ RPL++RQL+YA+ DVTHLR VY+ LA EL ++ R  WL EEMA L DP TY+ EPR+A+ RIKTR  NRRFL +LRE+ AWRETEA+ARDLPR R+++D+ALLE+AAHPPH++ EM + R V  GFADGKLG SLL A+RLG+E P+ DLP            G  VELLKV+LK++CE+ GVA KLVA++ADL+RIA DD+ADVPA+ GWRR++FG AAL LK G+LA+A +G +I L+
Sbjct:    8 ITDTEALTALVDRLKKAEYVTVDTEFLRDNTYWPKLCLVQVAGPDVAAIIDPLAPLIDLQPLLDLMADPNVLKVFHAARQDIEIFLKISGRIPEPLFDTQVAAMVCGYGDSVSYETLVSKIARASLDKSSRFTDWTRRPLTDRQLQYAIGDVTHLRKVYDNLAGELERSDRTEWLDEEMAILMDPATYIVEPRQAFQRIKTRTTNRRFLAILREVAAWRETEARARDLPRGRLLKDDALLELAAHPPHSIDEMKQSRGVPKGFADGKLGPSLLEAVRLGLECPDEDLPEAEKPVETPRGVGPLVELLKVMLKLQCERHGVAQKLVANTADLERIAGDDEADVPALSGWRRQVFGEAALALKTGKLALAAEGRRIKLI 384          
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: A0A2S2CRZ2_9PROT (Ribonuclease D n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CRZ2_9PROT)

HSP 1 Score: 476 bits (1224), Expect = 1.340e-164
Identity = 231/385 (60.00%), Postives = 293/385 (76.10%), Query Frame = 1
Query:    1 MKVITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGPSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAMKGNKIILVPVPGA 1155
            M +IT T  L A C  LA A YITVDTEFLREKT+WP+LCLVQ+ GP+  + IDPLA GMDL+PL+DLMA++++LKVFHAARQDVEIF H  G IP P+FDTQVAAMVCGFG+SVGY+TL  K++   IDKSSRF+DWS RPL+ERQL YA+ DVTHLR  YE L R L +  R  WL EEMA LTDP TY  +P  +W R+K R    RF+ +LRE+ AWRE EAQ RDLPRSRV+RDEALLEIAAH P T+ ++ + R +  G A+G+ G  +LAA++ G++LP+++LP +  R+ P P      ELL+VLLK+KC+++ VA+KLVASSADL+ +A DDDA V A+HGWRRE+FG  AL LKHGR+ +A+   ++ ++PVPGA
Sbjct:    1 MTLITTTDALEAFCRSLAGAEYITVDTEFLREKTYWPQLCLVQVGGPDRAVAIDPLAEGMDLTPLFDLMADSSILKVFHAARQDVEIFWHLSGRIPNPLFDTQVAAMVCGFGESVGYETLVTKLAGARIDKSSRFTDWSQRPLTERQLTYALSDVTHLRPAYEKLKRRLARTGRAHWLEEEMAVLTDPATYQVDPETSWQRLKVRTNKPRFMAILRELAAWREREAQRRDLPRSRVLRDEALLEIAAHAPATVDDLARTRGMGRGVAEGRQGADILAAVQAGLDLPDSELPRVEPREEPPPGLQPITELLRVLLKMKCDENNVAAKLVASSADLEALAADDDAPVAALHGWRRELFGEDALALKHGRIGLAVANRRVRIMPVPGA 385          
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: Q2W3D4_MAGSA (Ribonuclease D n=9 Tax=Magnetospirillum TaxID=13134 RepID=Q2W3D4_MAGSA)

HSP 1 Score: 474 bits (1219), Expect = 6.250e-164
Identity = 230/384 (59.90%), Postives = 290/384 (75.52%), Query Frame = 1
Query:    1 MKVITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGPSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAM--KGNKIILVPV 1146
            M +I+DT  L A C RL  AP++TVDTEF+REKT+WP+LCLVQ+AGP++   IDPLAP MDL+PL++LMA+T VLKVFHAARQDVEIF H    IP P+FDTQ+AAMVCGFGDSVGY+TLA +++K  IDKS RF+DWS+RPLSE+Q++YA+ DVTHLR  YE L R++ KN R  WLSEEMA LT+P TY  +P  AW R+K R  + RFL VL+E+ AWRE EAQ RDLPR R++RDE L EIAAH P    E+G+ R +  G  +GK+G ++L A++ G+ +PEAD P   DR       G  VELLKVLLK+KC++ GVA KL+A+SAD+D IA DDDADVPA+HGWRR++FG  AL LKHGRL +     G ++  VP+
Sbjct:    1 MPMISDTESLAAFCRRLKSAPFVTVDTEFMREKTYWPQLCLVQVAGPDEARAIDPLAPDMDLAPLFELMADTNVLKVFHAARQDVEIFLHLADAIPTPIFDTQIAAMVCGFGDSVGYETLASQLAKARIDKSMRFTDWSIRPLSEKQIQYALADVTHLRVAYEKLVRKVEKNGRIEWLSEEMALLTEPGTYRVDPENAWRRLKPRSTSGRFLAVLKELAAWREREAQERDLPRQRILRDETLTEIAAHHPTDTHELGRTRGIGKGLVEGKMGLAILEAVKRGMAMPEADCPKPSDRVDVPKGLGPVVELLKVLLKMKCDEHGVAGKLIANSADIDAIAADDDADVPALHGWRRDLFGADALKLKHGRLGLGFCTDGKRLRTVPI 384          
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: A0A7C9UWQ5_9PROT (Ribonuclease D n=1 Tax=Magnetospirillum aberrantis SpK TaxID=908842 RepID=A0A7C9UWQ5_9PROT)

HSP 1 Score: 473 bits (1217), Expect = 1.050e-163
Identity = 231/387 (59.69%), Postives = 298/387 (77.00%), Query Frame = 1
Query:    1 MKVITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGPSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAM--KGNKIILVPVPGA 1155
            M +I DT EL A CARL+ APY+TVDTEF+REKT++P+LCLVQ+AGP++   IDPLAPGMDL+PL+ LMA+T+VLKVFHAARQDVEIF H  G +P P+FDTQVAAMVCGFGDSVGY+TLA +++K  IDKS RF+DWS+RPL+E+Q++YA+ DVTHLR VY+ LAR+L +N R  WL EEMA L  P TY T P +AW R+K R  + +FL VL+E+ AWRE EAQ RD+PR R++RDE L+EIAAH P  +AE+G+ R +  G  +GK+G ++L A++ G+ LPE  +P  P+R       G  V+LLKVLLK+KC++ GVA KLVA++AD++ IA  DDADVPA+HGWRRE+FG  AL LKHGRL +     G ++ LVP+  A
Sbjct:    1 MPMIADTQELAAFCARLSSAPYVTVDTEFMREKTYFPQLCLVQLAGPDEARAIDPLAPGMDLAPLFALMADTSVLKVFHAARQDVEIFLHLSGAVPTPLFDTQVAAMVCGFGDSVGYETLASQLAKARIDKSMRFTDWSLRPLTEKQIQYALADVTHLRVVYDKLARKLERNGRLEWLGEEMAELAAPGTYRTNPEDAWRRLKPRSSSPKFLAVLKELAAWREREAQERDIPRQRMLRDETLMEIAAHHPADVAELGRTRGLGKGLVEGKMGIAILEAVKRGLSLPEDQIPKPPERVELPRGLGPVVDLLKVLLKMKCDEHGVAQKLVANTADVEAIAATDDADVPALHGWRRELFGEDALALKHGRLGLGFCTDGRRLRLVPLDPA 387          
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: A0A6J4FHZ7_9PROT (Ribonuclease D n=1 Tax=Magnetospirillum sp. SS-4 TaxID=2681465 RepID=A0A6J4FHZ7_9PROT)

HSP 1 Score: 471 bits (1211), Expect = 1.020e-162
Identity = 233/383 (60.84%), Postives = 287/383 (74.93%), Query Frame = 1
Query:    1 MKVITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGPSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAM--KGNKIILVP 1143
            M +I+DT  L A C RL  A YITVDTEF+REKT+WP LCLVQ+ GP++   IDPLAPG+DL+PLY LMA+ +VLKVFHAARQDVEIF H GG +P P+FDTQVAAMVCGFGDSVGY+TLA +++K  IDK+ RF+DWS+RPLSE+Q++YA+ DVTHLR  YE L R+L KN R  WL+EEMA L DP TY  +P  AW R+K R  + RFL VL+E+ AWRE EAQ RDLPR RV+RDE L EIAAH P  + E+G+ R +  G  +GK+G ++L A+R G++ PE   P  PDR       G  VELLKVLLK+KC++ GVASKLVA+SAD+D IA DD ADVPA+HGWRRE+FG  AL LKHG L +     G ++ L+P
Sbjct:    1 MPMISDTASLDAFCQRLKSASYITVDTEFMREKTYWPILCLVQLGGPDEARAIDPLAPGIDLAPLYRLMADASVLKVFHAARQDVEIFLHQGGAVPTPLFDTQVAAMVCGFGDSVGYETLASQLAKARIDKTMRFTDWSIRPLSEKQIQYALADVTHLRVAYEKLVRKLEKNGRLDWLTEEMALLADPATYRVDPDNAWRRLKPRSTSPRFLAVLKELAAWREREAQERDLPRQRVLRDETLTEIAAHHPTDVNELGRTRGIGKGLVEGKMGLAILEAVRRGLDTPEDRCPVPPDRVEVPKGLGPVVELLKVLLKMKCDEHGVASKLVANSADIDAIAADDAADVPALHGWRRELFGEDALKLKHGHLGLGFCTDGRRLRLIP 383          
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: UPI0015D51699 (ribonuclease D n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D51699)

HSP 1 Score: 469 bits (1208), Expect = 2.130e-162
Identity = 227/381 (59.58%), Postives = 288/381 (75.59%), Query Frame = 1
Query:    1 MKVITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGPSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAMKGNKIILVP 1143
            M +IT T  L A C  LA A YI VDTEFLREKT+WP+LCLVQ+AGP+  + IDPLA GMDLSPL+++M + ++LKVFHAARQDVEIFHH  G +P P+FDTQVAAMVCGFGDSVGY+TL  K++   IDKSSRF+DWS RPL++RQL YA+ DV HLR  YE L R L +  RE WL EEMA LTDP TY+ +P  AWLR+K R    RF+ +L+E+ AWRE EAQ RD PR+RV+RDEALLEIAAH P ++ ++ + R +   FADG  G  +LAA++ G+++P+A+LP    R+ P P     VELL+VLLK+ C+ + VAS+LVAS+ADL+ IA DD+A VPA+HGWRREMFG  AL LKHGR+A+A+   ++ +VP
Sbjct:    1 MTLITSTDTLAAFCRSLAGADYIAVDTEFLREKTYWPQLCLVQVAGPKGAVAIDPLADGMDLSPLFEVMNDPSILKVFHAARQDVEIFHHLSGAVPHPLFDTQVAAMVCGFGDSVGYETLVTKLTNARIDKSSRFTDWSHRPLTDRQLTYALSDVIHLRPTYEKLRRRLQRTGREPWLEEEMAVLTDPATYLVDPDSAWLRLKARSAKPRFMAILKEVAAWREREAQRRDQPRNRVLRDEALLEIAAHAPLSVEDLARTRGMGRSFADGWQGADVLAAVQRGLDVPDAELPKFQAREEPPPGLQPIVELLRVLLKMTCDDNHVASRLVASAADLEAIAADDEAPVPALHGWRREMFGKDALALKHGRIALAIVDRRVRVVP 381          
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Match: A0A418WA64_9PROT (Ribonuclease D n=1 Tax=Oleomonas cavernae TaxID=2320859 RepID=A0A418WA64_9PROT)

HSP 1 Score: 468 bits (1204), Expect = 8.950e-162
Identity = 239/378 (63.23%), Postives = 296/378 (78.31%), Query Frame = 1
Query:   10 ITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDELIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMFDTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKYAMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWLRIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPPHTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPGP-STGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHGWRREMFGLAALDLKHGRLAIAMKGNKIILV 1140
            ITDT  LTA   RL  A Y+TVDTEFLR+ ++WPKLCLVQ+AGP +  IIDPLAP +DLSPL+DLMA+  VLKVFHAARQD+EIF    G IP+P+FDTQVAAMVCG+GDSV Y+TL  KI++  +DKSSRF+DWS RPL++RQL+YA+ DVT LR VY+ L  EL K+ R  WL EEMA L DP TY+ EP EA+ RIKTR  NRRFLGVLREI AWRETEA+ARDLPR R+++D+ALLE+AAHPP ++ +M + R V  GFADGKLG SLL A+  G+  PE DL P+ ++    P   G  VELLKV+LK++CE  GVA KLVA++ADL++IA  D+ADVPA+HGWRR++FG AAL LKHGR+A+A +G +I L+
Sbjct:    8 ITDTAGLTALVERLREADYVTVDTEFLRDNSYWPKLCLVQVAGPNEAAIIDPLAPLIDLSPLFDLMADHNVLKVFHAARQDIEIFLKLSGRIPEPLFDTQVAAMVCGYGDSVSYETLVAKIARAGLDKSSRFTDWSRRPLTDRQLQYAIGDVTFLRKVYDTLYAELEKSGRIDWLDEEMAILMDPATYIIEPDEAYQRIKTRTTNRRFLGVLREIAAWRETEARARDLPRGRLLKDDALLEVAAHPPASIDDMKQSRGVPKGFADGKLGPSLLEAVLRGLNCPE-DLLPVAEQVTEAPRGVGPLVELLKVMLKLQCEDHGVAQKLVANTADLEQIAGSDEADVPALHGWRRQIFGDAALALKHGRVALAAEGRRIKLI 384          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8091.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TV43_9PROT5.170e-20072.77Ribonuclease D n=1 Tax=Alphaproteobacteria bacteri... [more]
A0A3D3UJS6_9PROT9.990e-17765.26Ribonuclease D n=8 Tax=Alphaproteobacteria bacteri... [more]
A0A2U1WNB7_9PROT2.840e-16762.20Ribonuclease D n=1 Tax=Azospirillum sp. TSO22-1 Ta... [more]
UPI001F267FCB6.840e-16663.40ribonuclease D n=1 Tax=Zavarzinia compransoris Tax... [more]
A0A2S2CRZ2_9PROT1.340e-16460.00Ribonuclease D n=1 Tax=Azospirillum thermophilum T... [more]
Q2W3D4_MAGSA6.250e-16459.90Ribonuclease D n=9 Tax=Magnetospirillum TaxID=1313... [more]
A0A7C9UWQ5_9PROT1.050e-16359.69Ribonuclease D n=1 Tax=Magnetospirillum aberrantis... [more]
A0A6J4FHZ7_9PROT1.020e-16260.84Ribonuclease D n=1 Tax=Magnetospirillum sp. SS-4 T... [more]
UPI0015D516992.130e-16259.58ribonuclease D n=1 Tax=Azospirillum oleiclasticum ... [more]
A0A418WA64_9PROT8.950e-16263.23Ribonuclease D n=1 Tax=Oleomonas cavernae TaxID=23... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8091contigP-wetherbeei_contig8091:729..1889 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1244869.H261_17673
Preferred namernd
PFAMsDNA_pol_A_exo1,HRDC
Model size1161
Max annot lvl204441|Rhodospirillales
KEGG koko:K03684
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.06e-164
EggNOG OGsCOG0349@1|root,COG0349@2|Bacteria,1MURV@1224|Proteobacteria,2TSQM@28211|Alphaproteobacteria,2JP8M@204441|Rhodospirillales
EC3.1.13.5
DescriptionExonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
Cds size1161
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187019.6572444-CDS-P-wetherbeei_contig8091:728..18891683187019.6572444-CDS-P-wetherbeei_contig8091:728..1889Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8091 729..1889 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8091.2.1prot_P-wetherbeei_contig8091.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8091 729..1889 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8091.2.1

>prot_P-wetherbeei_contig8091.2.1 ID=prot_P-wetherbeei_contig8091.2.1|Name=mRNA_P-wetherbeei_contig8091.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=387bp
MKVITDTHELTACCARLAHAPYITVDTEFLREKTFWPKLCLVQIAGPEDE
LIIDPLAPGMDLSPLYDLMANTAVLKVFHAARQDVEIFHHDGGVIPKPMF
DTQVAAMVCGFGDSVGYDTLARKISKVHIDKSSRFSDWSVRPLSERQLKY
AMQDVTHLRGVYEWLARELHKNRREAWLSEEMATLTDPKTYVTEPREAWL
RIKTRGGNRRFLGVLREITAWRETEAQARDLPRSRVIRDEALLEIAAHPP
HTLAEMGKMRSVTSGFADGKLGGSLLAAIRLGVELPEADLPPLPDRDAPG
PSTGGTVELLKVLLKIKCEQDGVASKLVASSADLDRIATDDDADVPAMHG
WRREMFGLAALDLKHGRLAIAMKGNKIILVPVPGAP*
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mRNA from alignment at P-wetherbeei_contig8091:729..1889+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8091.2.1 ID=mRNA_P-wetherbeei_contig8091.2.1|Name=mRNA_P-wetherbeei_contig8091.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1161bp|location=Sequence derived from alignment at P-wetherbeei_contig8091:729..1889+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAGTAATCACAGACACGCATGAACTGACGGCTTGTTGCGCGCGGCT AGCCCACGCCCCGTATATTACCGTAGATACCGAATTTCTTCGGGAAAAAA CCTTTTGGCCAAAGCTTTGCCTCGTGCAGATTGCCGGGCCGGAGGATGAA CTGATCATCGACCCACTGGCGCCGGGCATGGATCTGTCGCCGCTCTATGA TCTGATGGCCAATACGGCAGTGCTGAAGGTGTTTCATGCGGCGCGCCAGG ATGTGGAGATCTTCCACCATGATGGCGGGGTCATCCCCAAGCCCATGTTC GATACCCAGGTGGCGGCCATGGTGTGCGGTTTTGGCGATTCGGTTGGCTA TGACACGCTGGCCCGCAAGATCAGCAAGGTGCATATCGATAAAAGCTCGC GCTTCAGCGACTGGTCGGTGCGGCCATTGAGCGAGCGACAGCTAAAATAC GCCATGCAGGATGTTACGCATTTGCGCGGCGTGTATGAATGGCTGGCGCG CGAATTACACAAAAACCGGCGCGAGGCCTGGCTGTCCGAAGAGATGGCCA CGCTCACCGATCCCAAAACCTATGTGACGGAGCCGCGCGAAGCCTGGCTG CGCATCAAAACGCGCGGCGGCAACCGCCGCTTCCTGGGCGTGCTGCGCGA AATTACCGCATGGCGCGAGACCGAGGCGCAGGCGCGTGACCTGCCCCGCA GCCGGGTGATCCGGGATGAGGCGCTGCTGGAAATCGCGGCGCATCCCCCG CACACGCTTGCCGAGATGGGCAAGATGCGCTCGGTCACCTCCGGCTTTGC GGACGGCAAGCTGGGCGGTTCTTTGTTGGCGGCGATTCGCCTGGGGGTAG AACTACCGGAGGCGGACCTGCCGCCACTGCCAGACCGTGACGCGCCCGGT CCATCGACCGGCGGCACTGTCGAATTGCTGAAGGTATTGCTGAAAATAAA ATGCGAACAGGATGGCGTGGCCAGCAAACTGGTTGCCAGCAGCGCCGATC TGGATCGTATTGCCACAGATGACGACGCCGATGTGCCAGCCATGCATGGC TGGCGGCGGGAAATGTTTGGTCTGGCGGCGCTGGATCTGAAACATGGCAG ACTGGCCATTGCCATGAAGGGCAACAAAATTATTCTGGTGCCCGTTCCCG GCGCGCCTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8091:729..1889+

>mRNA_P-wetherbeei_contig8091.2.1 ID=mRNA_P-wetherbeei_contig8091.2.1|Name=mRNA_P-wetherbeei_contig8091.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1161bp|location=Sequence derived from alignment at P-wetherbeei_contig8091:729..1889+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAGTAATCACAGACACGCATGAACTGACGGCTTGTTGCGCGCGGCT
AGCCCACGCCCCGTATATTACCGTAGATACCGAATTTCTTCGGGAAAAAA
CCTTTTGGCCAAAGCTTTGCCTCGTGCAGATTGCCGGGCCGGAGGATGAA
CTGATCATCGACCCACTGGCGCCGGGCATGGATCTGTCGCCGCTCTATGA
TCTGATGGCCAATACGGCAGTGCTGAAGGTGTTTCATGCGGCGCGCCAGG
ATGTGGAGATCTTCCACCATGATGGCGGGGTCATCCCCAAGCCCATGTTC
GATACCCAGGTGGCGGCCATGGTGTGCGGTTTTGGCGATTCGGTTGGCTA
TGACACGCTGGCCCGCAAGATCAGCAAGGTGCATATCGATAAAAGCTCGC
GCTTCAGCGACTGGTCGGTGCGGCCATTGAGCGAGCGACAGCTAAAATAC
GCCATGCAGGATGTTACGCATTTGCGCGGCGTGTATGAATGGCTGGCGCG
CGAATTACACAAAAACCGGCGCGAGGCCTGGCTGTCCGAAGAGATGGCCA
CGCTCACCGATCCCAAAACCTATGTGACGGAGCCGCGCGAAGCCTGGCTG
CGCATCAAAACGCGCGGCGGCAACCGCCGCTTCCTGGGCGTGCTGCGCGA
AATTACCGCATGGCGCGAGACCGAGGCGCAGGCGCGTGACCTGCCCCGCA
GCCGGGTGATCCGGGATGAGGCGCTGCTGGAAATCGCGGCGCATCCCCCG
CACACGCTTGCCGAGATGGGCAAGATGCGCTCGGTCACCTCCGGCTTTGC
GGACGGCAAGCTGGGCGGTTCTTTGTTGGCGGCGATTCGCCTGGGGGTAG
AACTACCGGAGGCGGACCTGCCGCCACTGCCAGACCGTGACGCGCCCGGT
CCATCGACCGGCGGCACTGTCGAATTGCTGAAGGTATTGCTGAAAATAAA
ATGCGAACAGGATGGCGTGGCCAGCAAACTGGTTGCCAGCAGCGCCGATC
TGGATCGTATTGCCACAGATGACGACGCCGATGTGCCAGCCATGCATGGC
TGGCGGCGGGAAATGTTTGGTCTGGCGGCGCTGGATCTGAAACATGGCAG
ACTGGCCATTGCCATGAAGGGCAACAAAATTATTCTGGTGCCCGTTCCCG
GCGCGCCTTAA
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