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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2375 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 1488 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683187019.2193265-UTR-P-wetherbeei_contig8088:188..996 | 1683187019.2193265-UTR-P-wetherbeei_contig8088:188..996 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig8088 189..996 - |
| 1683187019.2530847-UTR-P-wetherbeei_contig8088:2821..2900 | 1683187019.2530847-UTR-P-wetherbeei_contig8088:2821..2900 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig8088 2822..2900 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683187019.2308269-CDS-P-wetherbeei_contig8088:996..1167 | 1683187019.2308269-CDS-P-wetherbeei_contig8088:996..1167 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig8088 997..1167 - |
| 1683187019.2419643-CDS-P-wetherbeei_contig8088:1504..2821 | 1683187019.2419643-CDS-P-wetherbeei_contig8088:1504..2821 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig8088 1505..2821 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8088.1.2 >prot_P-wetherbeei_contig8088.1.2 ID=prot_P-wetherbeei_contig8088.1.2|Name=mRNA_P-wetherbeei_contig8088.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=496bp
MYDSAVAADKRGDVRTASQLLLNLAVVHPTDGRVWCRLARLRRASGDQDG
ARAVLQSALQVVPKCGFVWHALAELERARGHVAEARLLFRRAVTVDPALS
RAYDAWGRMESAAGNLAVAKALFHKGLRADRASHRLWHAYGVALDRTGEA
PKARAAFAEGLRLAPANPHLMTAAAVADFRAGRTAEARTLLGRCLRLNPR
FVPAWLASAQLEEREGNVDLARHRYRQGTRACTDARKIGAGTGTAGGNDG
SNGRLSVQLWQGWARLEELAGDKRAAVRVYSQASLLFEADAELWVQWAKL
EADLGSPLKAREIVRQAVRIAPRKARPYHASAELEMELGQHERARVLFFK
GAAASDGGPDLAPLLVSWAICEWRLKSVERARALFEWAARMWDGRRGYVF
EQWARFEVAQGNAALASHYASRAITAEPSYWEAWQLWAELEEGRGNAERA
TEYRQMAQSLRAQAEVHGGRRFEDHPLKRRWGGIPPLPLAERLRL* back to topmRNA from alignment at P-wetherbeei_contig8088:189..2900- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig8088.1.2 ID=mRNA_P-wetherbeei_contig8088.1.2|Name=mRNA_P-wetherbeei_contig8088.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2712bp|location=Sequence derived from alignment at P-wetherbeei_contig8088:189..2900- (Phaeothamnion wetherbeei SAG_119_79)
GGCGGCAGCGGCGACGGCGGCGGCAGCGGGCCGGGGCTCGGCCCTCGGCA
CGACGTACACCCCTGCGGAACTGGACCGCATGTACGATAGCGCCGTGGCG
GCGGACAAGCGCGGCGACGTCCGTACGGCGTCCCAGCTGCTCCTGAACCT
CGCCGTCGTCCACCCTACGGACGGCCGCGTCTGGTGTCGCCTCGCCCGCC
TCCGCCGTGCCTCCGGCGACCAAGATGGCGCTCGTGCCGTCCTGCAGAGC
GCCCTGCAGGTCGTCCCGAAGTGCGGCTTCGTCTGGCACGCCCTGGCGGA
GCTGGAGCGCGCTCGCGGCCACGTGGCCGAGGCGCGGCTCCTGTTCCGTC
GCGCAGTAACCGTCGACCCGGCGCTGTCGCGCGCGTATGACGCGTGGGGC
CGCATGGAGTCGGCCGCTGGAAACCTCGCCGTGGCCAAGGCGCTCTTTCA
CAAGGGCCTGCGGGCGGACCGCGCCAGCCACCGCCTGTGGCACGCGTACG
GCGTGGCGCTGGACCGCACGGGTGAGGCGCCCAAGGCGCGCGCCGCCTTC
GCGGAGGGGCTGCGGCTGGCGCCAGCCAACCCGCACTTGATGACGGCGGC
GGCCGTCGCCGACTTTCGCGCTGGACGCACTGCAGAGGCACGGACATTGC
TCGGGCGCTGCCTGCGGCTCAATCCGCGCTTCGTGCCTGCCTGGCTGGCC
TCAGCGCAGCTAGAGGAGCGGGAAGGAAACGTCGATTTGGCGCGGCACCG
CTACCGGCAGGGAACCCGTGCATGCACCGACGCCCGCAAGATCGGCGCCG
GCACTGGTACGGCCGGCGGTAACGATGGCAGTAATGGGCGGTTGTCGGTG
CAGCTGTGGCAGGGGTGGGCGCGGCTGGAGGAATTGGCGGGCGACAAGCG
CGCCGCCGTGCGCGTCTACAGCCAGGCGTCGCTACTCTTCGAGGCGGACG
CCGAGCTCTGGGTGCAGTGGGCCAAGCTGGAAGCCGACCTCGGCAGCCCG
TTGAAGGCTCGCGAGATTGTCCGGCAGGCGGTGCGCATCGCGCCGCGCAA
GGCCCGCCCGTACCACGCGAGCGCCGAGCTGGAGATGGAGCTGGGCCAGC
ACGAGCGGGCGCGAGTGCTCTTCTTCAAGGGCGCGGCCGCCAGCGACGGT
GGCCCGGACCTGGCGCCGCTGCTGGTGTCGTGGGCCATTTGCGAATGGCG
GCTCAAGAGCGTGGAGCGAGCGCGGGCGCTATTCGAGTGGGCAGCGCGCA
TGTGGGACGGGCGGCGCGGCTACGTTTTCGAGCAGTGGGCGCGCTTCGAG
GTGGCGCAGGGCAACGCGGCGCTGGCGTCGCACTACGCGTCGCGGGCCAT
TACGGCCGAACCCTCGTACTGGGAGGCCTGGCAGCTCTGGGCCGAGGTGA
GCTTCTTGTGTCACCGACGGAATGGAGAAGGAGCGAGAACTTTTTTTGAC
AGTTCATTTCGTTTTTGTTGCGGCGTTTGAAGATTGGCGGTTGGATTTCG
TTTTCTGAGATGCGCTTCAAATTGCTTCGTTTTCCTTTTAAAAAATGACC
TTCTCGTATGATACTATGGCTTGCTTTTTTCGGATCTTCAGATCTTCCGC
TTGCACTAGGCGTTTAGGAAGGGCATTAACTATTTGGCGCTTCGCGTTCC
TCCTTGACTTTCTCTGTCATGAGTTGGGCTCCATTCACTCATTCTTTCTC
CTTCCGCCCTTTTCCCACTTCACTCCTCGGCAGCTGGAGGAGGGCCGCGG
CAACGCGGAACGGGCTACAGAGTACCGGCAGATGGCGCAATCGCTGCGGG
CGCAGGCCGAGGTGCACGGCGGCCGCCGCTTCGAGGATCACCCGCTTAAG
CGCCGCTGGGGCGGCATCCCGCCGCTGCCGCTCGCCGAGCGTCTCCGCTT
GTAGCGACGGCGAAAGCGCCGGCGACGGCGACTGCTGCAATGGCGGTGAC
GACGATAGCAATTTGGGCGCTGAGACGGCGGCGGCAGTGGGCGGCGGCTG
CAGGAAAGGAATTTGACGGCGACAGCGTGTGTCGCGGCCTGTAAAAAGGG
TAATTTGCCCGGCACTCTGTTGTGGCCGGTTTCACGCTGATTGGAGGGTT
ATGAACGGGACCAGGTTTGAGAGAGCCCTGTCCGGTTTGTACGGCGGTTA
CAAACCGCAAAGGAATAAAGGATGGTCCGACCGGAGCCGCCCCGTAACGA
GGCAGCGTCGCTTCTTTGCGACTGTAATGCGGCGCTGCCTGCGGCGTGGC
CCGCCTGCCACGGCGGCAGCGACGGCTGTGCAATGTGCCGCTCTTTGGCG
GCATCGCATGTGTCCAGGTAGCTGTGGAGGGAGCACATGCCTCTCGTGCA
GTTTGCGGCAGCTGCGACGCTAACGGTGTCGCATGCCTCGCTTGGGCGCA
CGCATCGTGGCTCCGCTTCTGCACAACAATTTTGTCAAGGAAATGGAGGA
GGGAGAAAAAAGGAAAACTGGAACGCAGGGTGATCATGAATGGATTTCGG
AGGGAGGGGTGGTGGTTCTGTGATTCGGCTTTTGGTCGACAAGCAGCAGC
CTTAAAGCCAAGCGGCGGGAATGGATGGAGGTTTCGGATGTGGGGGGAAG
GCAGGAAACCGCTGTGGCTGCGACTGGGTTTGTCAGCAATGTGCCAGCGA
TGGGCCCCCCCGGTCGCTGGCGGGCCGCTAGCTACTGAAGAACATGCAAA
CTTTATTGGGAG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig8088:189..2900- >mRNA_P-wetherbeei_contig8088.1.2 ID=mRNA_P-wetherbeei_contig8088.1.2|Name=mRNA_P-wetherbeei_contig8088.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1488bp|location=Sequence derived from alignment at P-wetherbeei_contig8088:189..2900- (Phaeothamnion wetherbeei SAG_119_79)
ATGTACGATAGCGCCGTGGCGGCGGACAAGCGCGGCGACGTCCGTACGGC
GTCCCAGCTGCTCCTGAACCTCGCCGTCGTCCACCCTACGGACGGCCGCG
TCTGGTGTCGCCTCGCCCGCCTCCGCCGTGCCTCCGGCGACCAAGATGGC
GCTCGTGCCGTCCTGCAGAGCGCCCTGCAGGTCGTCCCGAAGTGCGGCTT
CGTCTGGCACGCCCTGGCGGAGCTGGAGCGCGCTCGCGGCCACGTGGCCG
AGGCGCGGCTCCTGTTCCGTCGCGCAGTAACCGTCGACCCGGCGCTGTCG
CGCGCGTATGACGCGTGGGGCCGCATGGAGTCGGCCGCTGGAAACCTCGC
CGTGGCCAAGGCGCTCTTTCACAAGGGCCTGCGGGCGGACCGCGCCAGCC
ACCGCCTGTGGCACGCGTACGGCGTGGCGCTGGACCGCACGGGTGAGGCG
CCCAAGGCGCGCGCCGCCTTCGCGGAGGGGCTGCGGCTGGCGCCAGCCAA
CCCGCACTTGATGACGGCGGCGGCCGTCGCCGACTTTCGCGCTGGACGCA
CTGCAGAGGCACGGACATTGCTCGGGCGCTGCCTGCGGCTCAATCCGCGC
TTCGTGCCTGCCTGGCTGGCCTCAGCGCAGCTAGAGGAGCGGGAAGGAAA
CGTCGATTTGGCGCGGCACCGCTACCGGCAGGGAACCCGTGCATGCACCG
ACGCCCGCAAGATCGGCGCCGGCACTGGTACGGCCGGCGGTAACGATGGC
AGTAATGGGCGGTTGTCGGTGCAGCTGTGGCAGGGGTGGGCGCGGCTGGA
GGAATTGGCGGGCGACAAGCGCGCCGCCGTGCGCGTCTACAGCCAGGCGT
CGCTACTCTTCGAGGCGGACGCCGAGCTCTGGGTGCAGTGGGCCAAGCTG
GAAGCCGACCTCGGCAGCCCGTTGAAGGCTCGCGAGATTGTCCGGCAGGC
GGTGCGCATCGCGCCGCGCAAGGCCCGCCCGTACCACGCGAGCGCCGAGC
TGGAGATGGAGCTGGGCCAGCACGAGCGGGCGCGAGTGCTCTTCTTCAAG
GGCGCGGCCGCCAGCGACGGTGGCCCGGACCTGGCGCCGCTGCTGGTGTC
GTGGGCCATTTGCGAATGGCGGCTCAAGAGCGTGGAGCGAGCGCGGGCGC
TATTCGAGTGGGCAGCGCGCATGTGGGACGGGCGGCGCGGCTACGTTTTC
GAGCAGTGGGCGCGCTTCGAGGTGGCGCAGGGCAACGCGGCGCTGGCGTC
GCACTACGCGTCGCGGGCCATTACGGCCGAACCCTCGTACTGGGAGGCCT
GGCAGCTCTGGGCCGAGCTGGAGGAGGGCCGCGGCAACGCGGAACGGGCT
ACAGAGTACCGGCAGATGGCGCAATCGCTGCGGGCGCAGGCCGAGGTGCA
CGGCGGCCGCCGCTTCGAGGATCACCCGCTTAAGCGCCGCTGGGGCGGCA
TCCCGCCGCTGCCGCTCGCCGAGCGTCTCCGCTTGTAG back to top
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