mRNA_P-wetherbeei_contig8053.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: A0A7S2V2G5_9STRA (Superoxide dismutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G5_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.420e-64 Identity = 82/113 (72.57%), Postives = 102/113 (90.27%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH FYW SMSP GGG+P+G +++AI++SFGSF++FK+KFS AGGHFGSGWAWL KK DG+L +V THDASNPL EGKGKP++TCDVWEHA+YIDYRNA+P+YIAAWW+++NW
Sbjct: 73 NHTFYWNSMSPNGGGEPSGPISDAINSSFGSFESFKEKFSASAGGHFGSGWAWLCKKDDGSLEIVDTHDASNPLKEGKGKPILTCDVWEHAYYIDYRNARPSYIAAWWNVINW 185
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: D8LI17_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI17_ECTSI) HSP 1 Score: 198 bits (503), Expect = 1.180e-62 Identity = 82/113 (72.57%), Postives = 98/113 (86.73%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH FYW+S+SP+GGG+PTGA+ EAI+ FGSF+AFK+ FSD A GHFGSGWAWLVK G + VVGTHDASNP+ EGKG P++TCDVWEHA+YIDYRN++P YIAAWW+LVNW
Sbjct: 74 NHTFYWKSLSPSGGGEPTGAVKEAIEEKFGSFEAFKKAFSDTAAGHFGSGWAWLVKTESGGVDVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNW 186
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: A0A6V1U4U1_HETAK (Superoxide dismutase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U4U1_HETAK) HSP 1 Score: 194 bits (492), Expect = 1.420e-60 Identity = 81/113 (71.68%), Postives = 97/113 (85.84%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH FYW+SMSP+GGG PTG +A+AI+ASFGSFDAFK++FS AGGHFGSGWAWL K +DG+L + THDA N L EG G PL+TCDVWEHA+YIDYRNA+P Y+AAWW+L+NW
Sbjct: 105 NHTFYWKSMSPSGGGAPTGPIADAINASFGSFDAFKEQFSAVAGGHFGSGWAWLCKNADGSLSIQETHDAGNVLKEGLGTPLLTCDVWEHAYYIDYRNARPQYVAAWWNLINW 217
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: A0A835ZFU3_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU3_9STRA) HSP 1 Score: 191 bits (486), Expect = 4.980e-60 Identity = 81/113 (71.68%), Postives = 94/113 (83.19%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH+FYW S+SP GGG PTG +A+AI SFG FD FK F AGGHFGSGWAWLVK DG+L VV THDASNP+VE GKP++TCDVWEHA+YIDYRNA+P+Y+AAWW+LVNW
Sbjct: 78 NHDFYWHSLSPEGGGTPTGPIADAIKESFGDFDKFKAAFDAAAGGHFGSGWAWLVKADDGSLKVVSTHDASNPVVEKLGKPIITCDVWEHAYYIDYRNARPSYLAAWWNLVNW 190
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: W7T7U7_9STRA (Superoxide dismutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7U7_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.470e-57 Identity = 80/113 (70.80%), Postives = 92/113 (81.42%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH FYW SM+P GG P+G +A+ I+A+FGSFD FK +FS A GHFGSGWAWLV K DG L VV THDASNPL EG G PL+TCDVWEHA+Y+DYRNA+PAY+ AWWSLVNW
Sbjct: 75 NHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLK-DGKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNW 186
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: A0A0G4GGW9_VITBC (Superoxide dismutase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GGW9_VITBC) HSP 1 Score: 183 bits (465), Expect = 9.060e-57 Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH FYW M P GGG PTGA+ + IDA+FGSFDAFK++FS A GHFGSGWAWLV DG L +VG HDA NP+ +G GK ++TCDVWEHA+Y+DYRN +P Y+AAWW+LVNW
Sbjct: 82 NHTFYWSCMKPGGGGLPTGAVKDKIDAAFGSFDAFKEQFSTAAAGHFGSGWAWLVAGDDGKLKIVGGHDAMNPMKDGSGKAILTCDVWEHAYYVDYRNERPKYVAAWWNLVNW 194
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: A0A7C7YMU4_9ARCH (Superoxide dismutase n=2 Tax=Archaea TaxID=2157 RepID=A0A7C7YMU4_9ARCH) HSP 1 Score: 178 bits (452), Expect = 5.890e-55 Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH FYW SMSP GGG+PTGA+A ID +FGSF+ FK F+ AGGHFGSGWAWLV S+G L +V THDA NPL +G P++TCDVWEHA+YID +NA+PAYIAAWW LVNW
Sbjct: 73 NHTFYWNSMSPNGGGEPTGAIAGKIDETFGSFEEFKTAFTAAAGGHFGSGWAWLVMNSNGGLEIVDTHDAGNPLTDGL-TPILTCDVWEHAYYIDRKNARPAYIAAWWELVNW 184
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: A0A7C5EH16_9BACT (Superoxide dismutase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5EH16_9BACT) HSP 1 Score: 177 bits (448), Expect = 2.310e-54 Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH+FYW+ +SP GGG P GA+A+AI+ SFGSFDAFK F+ AGGHFGSGWAWLVK +DG L V THDA P+ +G KP++TCDVWEHA+YIDYRNA+P YI A+W+LVNW
Sbjct: 73 NHSFYWKCLSPNGGGTPKGAIADAINESFGSFDAFKDAFTKAAGGHFGSGWAWLVKNADGKLEVTSTHDAGCPIRDG-AKPILTCDVWEHAYYIDYRNARPKYIEAFWNLVNW 184
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: A0A0G4G4J6_VITBC (Superoxide dismutase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G4J6_VITBC) HSP 1 Score: 176 bits (445), Expect = 7.480e-54 Identity = 72/113 (63.72%), Postives = 88/113 (77.88%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH+FYW S+SP+GGG+P GA+ AI+ FGSF FK FS A GHFGSGW WLVK +DG L + THDA NPL +G G PL+TCDVWEHA+Y+DYRN +P+Y+ AWW+LVNW
Sbjct: 73 NHSFYWNSLSPSGGGEPKGAIKAAIEQDFGSFQKFKDDFSANAAGHFGSGWVWLVKGTDGKLKIHQTHDAGNPLRDGAGVPLLTCDVWEHAYYVDYRNDRPSYVKAWWNLVNW 185
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Match: A0A4R6UMV6_9GAMM (Superoxide dismutase n=1 Tax=Permianibacter aggregans TaxID=1510150 RepID=A0A4R6UMV6_9GAMM) HSP 1 Score: 175 bits (443), Expect = 1.370e-53 Identity = 76/113 (67.26%), Postives = 94/113 (83.19%), Query Frame = 1
Query: 1 NHNFYWQSMSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSDGALGVVGTHDASNPLVEGKGKPLMTCDVWEHAFYIDYRNAKPAYIAAWWSLVNW 339
NH FYW S+SP GGG+P GALA+AI+ +FGSF AFK+KFS A G+FGSGW WLVKKSDG++ +V T A NPL++G KPL+TCDVWEHA+YIDYRNA+P Y+ A+W+LVNW
Sbjct: 73 NHTFYWNSLSPNGGGEPKGALADAINKAFGSFAAFKEKFSASAVGNFGSGWTWLVKKSDGSVDIVNTGAAGNPLLDGH-KPLLTCDVWEHAYYIDYRNARPKYVEAFWNLVNW 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8053.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8053.1.1 >prot_P-wetherbeei_contig8053.1.1 ID=prot_P-wetherbeei_contig8053.1.1|Name=mRNA_P-wetherbeei_contig8053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp MSPTGGGKPTGALAEAIDASFGSFDAFKQKFSDEAGGHFGSGWAWLVKKSback to top mRNA from alignment at P-wetherbeei_contig8053:137..734+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8053.1.1 ID=mRNA_P-wetherbeei_contig8053.1.1|Name=mRNA_P-wetherbeei_contig8053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=598bp|location=Sequence derived from alignment at P-wetherbeei_contig8053:137..734+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8053:137..734+ >mRNA_P-wetherbeei_contig8053.1.1 ID=mRNA_P-wetherbeei_contig8053.1.1|Name=mRNA_P-wetherbeei_contig8053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig8053:137..734+ (Phaeothamnion wetherbeei SAG_119_79)back to top |