mRNA_P-wetherbeei_contig8034.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8034.1.1
Unique NamemRNA_P-wetherbeei_contig8034.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: A0A835YRL9_9STRA (Centrosomal protein of 162 kDa n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.170e-28
Identity = 74/154 (48.05%), Postives = 102/154 (66.23%), Query Frame = 1
Query:    4 ERRRQAAECKSLRAKLEWYTENQELLDQNALKVTEQAREIDTLKRTLREYGRAPAGXXXXXXXSNDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSESLEARARESDRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQKRLEE 465
            E+RR A E   L+ +L+WY ENQ++LDQ       QA E   LK  L++ G+   G       S       ELE QL+E+EEA+R+RNPDCLA+L+RAA+P++S+E RA + D+RV  L+ E+ER K D E+KLR+LRQQH+RV  G ++RL E
Sbjct:  983 EKRRHAEEMAQLQRRLQWYIENQDILDQ-------QAEENRRLKEALKQGGKGQ-GSSNAAGHSKGRAPADELEGQLREMEEAVRRRNPDCLASLIRAAKPTQSVELRAADQDQRVQELQAELERVKADTELKLRSLRQQHERVCAGLERRLVE 1128          
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: A0A6H5KNC7_9PHAE (Centrosomal protein of 162 kDa (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNC7_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 7.130e-26
Identity = 68/149 (45.64%), Postives = 103/149 (69.13%), Query Frame = 1
Query:   19 AAECKSLRAKLEWYTENQELLDQNALKVTEQAREIDTLKRTLREYGRAPA-GXXXXXXXSNDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSESLEARARESDRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQKRLE 462
            A + ++ RAKL+WY+ENQ+L+D N  ++ EQ  E+  L++ L + G+    G         D R++K+LEAQL EL EALR+R+PD LA+L+RAARP++S E R   + +R+A LE E+ R+   +E+KLR LRQ+H+RV+ G Q++LE
Sbjct:   52 AEDRRAARAKLDWYSENQDLVDGNLDRMREQEEELGRLRQELSKKGKGSGTGPGGPGRNPADIRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRKDGNVKRIAELEAELARSTAASELKLRALRQEHERVKNGLQRQLE 200          
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: A0A7S3PRE1_9STRA (Centrosomal protein of 162 kDa n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRE1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.050e-22
Identity = 62/142 (43.66%), Postives = 90/142 (63.38%), Query Frame = 1
Query:   25 ECKSLRAKLEWYTENQELLDQNALKVTEQAREIDTLKRTLREYGRAPAGXXXXXXXSNDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSESLEARARESDRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQ 450
            E K L+ KL+WY ENQ++LD N   + EQ   I TLK  +    +   G        +D +R++ LE  +KELEEALRKRNPDCLANL+RAA PSE      RE   +V+LLE E++  + ++  ++R LRQ+H++++L Y+
Sbjct:   63 EAKMLKEKLKWYAENQDILDANDKLIQEQREMIKTLKLNM-GGDKKLNGNNNNRSLPSDVKRIRSLEKHVKELEEALRKRNPDCLANLIRAAGPSEEELKTQRELQLKVSLLEEEIKEREVESSKRVRALRQEHEKIKLKYE 203          
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: A0A7S2SCF1_9STRA (Centrosomal protein of 162 kDa n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SCF1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.470e-21
Identity = 65/148 (43.92%), Postives = 96/148 (64.86%), Query Frame = 1
Query:   22 AECKSLRAKLEWYTENQELLDQNALKVTEQAREIDTLKRTLREYGRAPAGXXXXXXX-SNDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSESLEARARESDRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQKRLE 462
            +E K+L+ KL WY ENQ L++ N   + +QA  I  L+  L   G +PA           D +R++ LE Q+KEL+EALRKRNP+CLANL+ AA PS+S +   RE  ++VA LE E+E+ +     ++RTLRQ+H+RV++ Y++ LE
Sbjct:  307 SEAKALKEKLAWYAENQALINANEELIDKQAARISELESNL---GTSPAKTGRPKVSLPQDLKRIRTLEKQVKELDEALRKRNPNCLANLILAAGPSDSEKQTRRELRQKVAELEDELEKREGRFSSRIRTLRQEHERVKVRYERLLE 451          
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: A0A2R5G744_9STRA (Centrosomal protein of 162 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G744_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.420e-18
Identity = 61/158 (38.61%), Postives = 96/158 (60.76%), Query Frame = 1
Query:   25 ECKSLRAKLEWYTENQELLDQNALKVTEQAREIDTLKRTLREYGRAPAGXXXXXXXS-----------NDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSESLEARARESDRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQKRLEE 465
            E K+L+ KL WY ENQ+LL+++A  + EQ   I  L+ T +E   +          S           +D +R++ LE Q++ELEEALRKRNPDC+ANL+ AA P+++ +   RE   +VA L+ E+E        ++R+LRQ+H+RV++ Y++ L+E
Sbjct:  982 EAKALKEKLAWYVENQQLLEEHAAVIEEQRERIRVLE-TGKENDASSKSSVALVPVSASSRRPKQSLPSDLKRIRTLEKQVRELEEALRKRNPDCIANLILAAGPTDAEKETRRELREQVAALKEELESKAKMHASRMRSLRQEHERVKVRYERLLDE 1138          
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: D8LRE4_ECTSI (Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE4_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 4.790e-17
Identity = 55/120 (45.83%), Postives = 81/120 (67.50%), Query Frame = 1
Query:  106 EQAREIDTLKRTLREYGR-APAGXXXXXXXSNDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSESLEARARESDRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQKRLE 462
            EQ  E+  L++ L + G+ A  G         D R++K+LEAQL EL EALR+R+PD LA+L+RAARP++S E R   + +R+  LE E+ R+   +E+KLR LRQ+H+RV+ G Q++LE
Sbjct:    3 EQEEELGRLRQALSKKGKGAGDGAGGSGRNPADTRKIKDLEAQLAELAEALRRRHPDSLASLIRAARPTDSQELRNDGNVKRIGELEAELARSTAASELKLRALRQEHERVKNGLQRQLE 122          
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: A0A6G0WJ64_9STRA (Centrosomal protein of 162 kDa n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJ64_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.770e-14
Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 1
Query:   34 SLRAKLEWYTENQELLDQNALKVTEQAREIDTLKRTLR--------EYGRAPAGXXXXXXXSNDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSESLEARARESDRRVALLEVEVERTKHDAEVKLRTLRQQHDRV 435
            SL +KLEWY +NQ  +D+    V +Q + I  LK  L         +  RAPA          D RR++ LEAQLKE+E A+RKR+PD L NL+ A++PS +      ++   +  L+ +++  +   EVKL   RQQH+RV
Sbjct:  790 SLESKLEWYIQNQRFIDEQDALVKQQQQTISDLKEQLESKPKRMGNKMHRAPA----------DIRRIQALEAQLKEMETAMRKRHPDSLVNLILASKPSPNESKANEQAQLEIQRLKTQIQEMERAHEVKLTKFRQQHERV 921          
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: UPI000719E2C2 (centrosomal protein of 162 kDa-like isoform X1 n=2 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E2C2)

HSP 1 Score: 78.2 bits (191), Expect = 6.900e-14
Identity = 57/157 (36.31%), Postives = 92/157 (58.60%), Query Frame = 1
Query:   25 ECKSLRAKLEWYTENQELLDQNALKVTEQAREIDTLKRTLREYG-----RAPAGXXXXXXXSNDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSES------LEARARESDRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQKRLE 462
            E +SLR KL WY ENQ+L+D++A  + ++ +EI  L+  LR+       RA          S +AR++++L+ Q+KE+E  +RKRNP+ +A+L+ AA  + S        +R R  + R+  LEVE+ER   D +  LR ++QQ   V+L Y+ + E
Sbjct:  568 EAESLRKKLCWYAENQQLVDKDAQTLLDKDKEIAHLQDRLRQEAEVYSSRAETQKVGAKERSANARKIQDLQRQIKEMEVIMRKRNPNSVASLIMAANAAASSVSSPEASSRVRFLEERIKKLEVELERKDEDKKKALRAVQQQFTAVQLKYEDQAE 724          
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: A0A672FXB0_SALFA (Centrosomal protein of 162 kDa n=5 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FXB0_SALFA)

HSP 1 Score: 77.0 bits (188), Expect = 1.720e-13
Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = 1
Query:   13 RQAAECKSLRAKLEWYTENQELLDQNALKVTEQAREI----DTLKRTLREYGRAPAGXXXXXXXSNDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSESLEARARES-DRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQKRL 459
            R   E ++L+ KL+W+TENQELLD++A ++     E+    + +++   E GR+            D+RR++EL+ Q+KELE  LR RNP  L  L+ AA  +   EA      +RRV  LE E+E    +A+  LR++ QQ DR++L Y++ +
Sbjct:  427 RHQEEVEALKKKLQWFTENQELLDRDAGRLKAATAEVLQLREQVEKLKEEVGRSSEQQRRSRVKGVDSRRLQELQKQVKELELILRSRNPSSLPALIYAAASAGREEAGVTALLERRVQRLEAELESHDEEAKRSLRSMEQQFDRIKLRYEQEI 580          
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Match: A0A672FS29_SALFA (Centrosomal protein of 162 kDa n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FS29_SALFA)

HSP 1 Score: 77.0 bits (188), Expect = 1.720e-13
Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = 1
Query:   13 RQAAECKSLRAKLEWYTENQELLDQNALKVTEQAREI----DTLKRTLREYGRAPAGXXXXXXXSNDARRVKELEAQLKELEEALRKRNPDCLANLVRAARPSESLEARARES-DRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQKRL 459
            R   E ++L+ KL+W+TENQELLD++A ++     E+    + +++   E GR+            D+RR++EL+ Q+KELE  LR RNP  L  L+ AA  +   EA      +RRV  LE E+E    +A+  LR++ QQ DR++L Y++ +
Sbjct:  427 RHQEEVEALKKKLQWFTENQELLDRDAGRLKAATAEVLQLREQVEKLKEEVGRSSEQQRRSRVKGVDSRRLQELQKQVKELELILRSRNPSSLPALIYAAASAGREEAGVTALLERRVQRLEAELESHDEEAKRSLRSMEQQFDRIKLRYEQEI 580          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8034.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRL9_9STRA2.170e-2848.05Centrosomal protein of 162 kDa n=1 Tax=Tribonema m... [more]
A0A6H5KNC7_9PHAE7.130e-2645.64Centrosomal protein of 162 kDa (Fragment) n=1 Tax=... [more]
A0A7S3PRE1_9STRA1.050e-2243.66Centrosomal protein of 162 kDa n=1 Tax=Aplanochytr... [more]
A0A7S2SCF1_9STRA1.470e-2143.92Centrosomal protein of 162 kDa n=1 Tax=labyrinthul... [more]
A0A2R5G744_9STRA1.420e-1838.61Centrosomal protein of 162 kDa n=1 Tax=Hondaea fer... [more]
D8LRE4_ECTSI4.790e-1745.83Centrosomal protein of 162 kDa n=1 Tax=Ectocarpus ... [more]
A0A6G0WJ64_9STRA2.770e-1438.03Centrosomal protein of 162 kDa n=1 Tax=Aphanomyces... [more]
UPI000719E2C26.900e-1436.31centrosomal protein of 162 kDa-like isoform X1 n=2... [more]
A0A672FXB0_SALFA1.720e-1336.36Centrosomal protein of 162 kDa n=5 Tax=Salarias fa... [more]
A0A672FS29_SALFA1.720e-1336.36Centrosomal protein of 162 kDa n=1 Tax=Salarias fa... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8034contigP-wetherbeei_contig8034:1611..2512 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog8010.XP_010895481.1
Preferred nameCEP162
Model size465
Max annot lvl33208|Metazoa
KEGG koko:K16809
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005879,GO:0005881,GO:0005929,GO:0005930,GO:0006996,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0022406,GO:0022607,GO:0030030,GO:0030031,GO:0032838,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044450,GO:0044463,GO:0044464,GO:0044782,GO:0051179,GO:0051640,GO:0051641,GO:0060271,GO:0070925,GO:0071840,GO:0097014,GO:0097711,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056
Exons3
Evalue2.89e-14
EggNOG OGs28K8R@1|root,2QSPF@2759|Eukaryota,38CWP@33154|Opisthokonta,3BKA4@33208|Metazoa,3CXH6@33213|Bilateria,4858B@7711|Chordata,494RS@7742|Vertebrata,49Q8R@7898|Actinopterygii
DescriptionCentrosomal protein
Cds size465
COG categoryS
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187016.7555568-CDS-P-wetherbeei_contig8034:1610..18261683187016.7555568-CDS-P-wetherbeei_contig8034:1610..1826Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8034 1611..1826 +
1683187016.7656996-CDS-P-wetherbeei_contig8034:2043..21611683187016.7656996-CDS-P-wetherbeei_contig8034:2043..2161Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8034 2044..2161 +
1683187016.7742689-CDS-P-wetherbeei_contig8034:2381..25121683187016.7742689-CDS-P-wetherbeei_contig8034:2381..2512Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8034 2382..2512 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8034.1.1prot_P-wetherbeei_contig8034.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8034 1611..2512 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8034.1.1

>prot_P-wetherbeei_contig8034.1.1 ID=prot_P-wetherbeei_contig8034.1.1|Name=mRNA_P-wetherbeei_contig8034.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
EERRRQAAECKSLRAKLEWYTENQELLDQNALKVTEQAREIDTLKRTLRE
YGRAPAGGGGGGGGSNDARRVKELEAQLKELEEALRKRNPDCLANLVRAA
RPSESLEARARESDRRVALLEVEVERTKHDAEVKLRTLRQQHDRVRLGYQ
KRLEE
back to top

mRNA from alignment at P-wetherbeei_contig8034:1611..2512+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8034.1.1 ID=mRNA_P-wetherbeei_contig8034.1.1|Name=mRNA_P-wetherbeei_contig8034.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=902bp|location=Sequence derived from alignment at P-wetherbeei_contig8034:1611..2512+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGAGCGCCGCCGGCAGGCCGCCGAGTGCAAATCGCTCCGGGCAAAGCT GGAGTGGTACACGGAGAATCAGGAGCTGCTCGACCAGAATGCTCTGAAGG TAACGGAACAGGCGCGCGAGATCGACACGCTCAAGCGGACGCTGCGGGAG TACGGCCGGGCGCCGGCAGGAGGAGGCGGCGGCGGGGGTGGCAGCAACGA CGCGCGACGGGTCAAGGTAAGTGTAATTGACTCTGAAGAATTCACTCTCT CGCTGCCTCGGCACCGCCTCTCGCCCCGCTCTTGCTGTAAGGCTGCGTTA AGTGCTGACCTCGTCGGCTCACTGACCCTTTTCTTCGTTCAACGTCGGAT GCTGCTGTGCACCTCCCTCGCTGCTCATCCGTGCCGCTTTGCACGCCGCA CTGCCGCCGCTGCGCCGCCTGCCGCACGCACAGGAGCTGGAGGCGCAGCT GAAGGAGCTGGAAGAGGCGCTACGGAAGCGGAATCCGGACTGCCTCGCGA ACCTTGTTCGCGCTGCCCGCCCCAGCGAGTCACTCGAGGCCCGCGCCCGA GGTAAGACAAGCTCGCCACCGAGCCCGTGCCCCTTGATGTTGACTCTTCG CTGCGCCAGTCGGCGCCGGCCGGCTGCATGAACCGTGAAACCTCCTTTTC TGAGGTTATTGCGGGAGTGCAGCAGTGAAAAGCTGCGACTTGTATGCTGC GGCGCCACGCGTCTTCTGACTCTCATGTCTCCCCTGTTTTGTGTTTCGGC GCTGTTTTCGTCCGCCGGCAGAGAGCGATCGCCGCGTGGCGTTGCTGGAA GTGGAGGTGGAGCGCACGAAGCACGACGCGGAGGTCAAGCTGCGGACGCT GCGGCAGCAGCACGACCGCGTCCGCCTCGGCTACCAGAAGCGCCTTGAGG AG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig8034:1611..2512+

>mRNA_P-wetherbeei_contig8034.1.1 ID=mRNA_P-wetherbeei_contig8034.1.1|Name=mRNA_P-wetherbeei_contig8034.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig8034:1611..2512+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGAGCGCCGCCGGCAGGCCGCCGAGTGCAAATCGCTCCGGGCAAAGCT
GGAGTGGTACACGGAGAATCAGGAGCTGCTCGACCAGAATGCTCTGAAGG
TAACGGAACAGGCGCGCGAGATCGACACGCTCAAGCGGACGCTGCGGGAG
TACGGCCGGGCGCCGGCAGGAGGAGGCGGCGGCGGGGGTGGCAGCAACGA
CGCGCGACGGGTCAAGGAGCTGGAGGCGCAGCTGAAGGAGCTGGAAGAGG
CGCTACGGAAGCGGAATCCGGACTGCCTCGCGAACCTTGTTCGCGCTGCC
CGCCCCAGCGAGTCACTCGAGGCCCGCGCCCGAGAGAGCGATCGCCGCGT
GGCGTTGCTGGAAGTGGAGGTGGAGCGCACGAAGCACGACGCGGAGGTCA
AGCTGCGGACGCTGCGGCAGCAGCACGACCGCGTCCGCCTCGGCTACCAG
AAGCGCCTTGAGGAG
back to top