mRNA_P-wetherbeei_contig8023.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8023.1.1
Unique NamemRNA_P-wetherbeei_contig8023.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: D7FIE2_ECTSI (Abhydrolase domain-containing protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIE2_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 5.350e-85
Identity = 194/528 (36.74%), Postives = 277/528 (52.46%), Query Frame = 2
Query:  200 PEVWFRETKENLRLVA---ALPLEYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLRQRRVVVSSSIDSGSFALDWW---EAGLSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLGMTLTTRRPETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRFDRSKHTLAGIVSVSGLFDWAVMMRHIRASASF-YDWINARVTLMNYKRFGVFDALAAGVVAGAAAGRGAAGTAGAXXXXXXXXMVGLAAXXXXXXXXXXXXTKAPAGKGGQSVPTVAQQTAPASENDXXXXXXXXXXXMAPASEPPPQSPRT------------------GKRPASLSSAPAXXXXXXXXXXXXXXLLRSP--------------PPAPESWRPPSHEQVLAIKNHTSFHEALTIPFSGDADVDTYNARLQALQLSAIAGVDVPVLALLARDDPVCPPLAWERALAAAAANPAFVVVVTDRGGHCGFFEGVFGDSWLDRIIEQFSRALLE 1666
            P++ +++T  N RL++    L   Y PSPW  + +GGH+QSF+FAT+C P     + RL  R+  V SS D G F +DW+   E  L ADAP++FV+PGVVG+  N+YIR +AAH +   G R V K WRG+G+ L+TRRPETWD  A+ D  DAI+ +RR VG  VP++GVG+S+GG VLT IAG   + +H L G+VS+SGLFD   MM+HI    ++ Y + N +VT+ NY++F V + L A        GR +     +         +G+                    +  + +   +  +A      XXXXXXXXXXX                                G+     ++A A              LL S               P A  +    + +++ A+K+ ++FHEALT+PF+GD+ VD Y  R+  +    ++ V VP L LLA+DDP+CPP AW  AL AAA +   VV +T+ GGHCG+F+G+   SWLDR    F  + LE
Sbjct:   96 PQLRYKKTAFNRRLLSEASVLRQPYVPSPWLGHRLGGHMQSFMFATWCPPGDRAMVSRLVSRQDRVESSFDGGVFRMDWFDLRETPLPADAPVVFVLPGVVGQGTNVYIRHLAAHLSTKYGYRVVTKNWRGIGLELSTRRPETWDHAALSDCRDAIKHLRRTVGEHVPVLGVGFSFGGCVLTAIAGTAPQEEHGLCGLVSISGLFDMPAMMKHIAEQYAYPYGFANTKVTVKNYRKFKVLETLTAEADVSVPGGRSSGPIRNSSFCSSDDEGMGVGPSSSSATAEEPLRPSTGPMRTRKKLRPASAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVDGETTQGTATAEAVASRRGDEVFHTASLLDSGHGKGREVGMPAGAGPGAGATSGLVTAKEMAAMKDPSAFHEALTLPFTGDSSVDAYFQRIGRVMGQGVSSVTVPTLCLLAKDDPLCPPHAWVGALEAAAKSDGIVVAITEHGGHCGWFDGLGAGSWLDRATGNFLSSALE 623          
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: A0A835YXD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.180e-59
Identity = 116/287 (40.42%), Postives = 169/287 (58.89%), Query Frame = 2
Query:  131 RKLFNSYFGEGWSSVRGTFGFSRPEVWFRETKENLRLVAALPL--EYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLRQRRVVVS----------------------SSIDSGSFALDWWEAG-----LSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLGMTLTTRRPETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRFDRSKHTLAGIVSVSGLFDWAVMMRHIRASASF-YDWINARVTLMNYKRFGVFD 901
            +  F S     W+ +     F+     F E+++N  LV A+     Y P+PW ++ +GGH+QS +FA +C P+ WR   ++  ++ +V                       SS D G+F + WW+A      L + AP++ ++PGVVGK +NIY++R+A H A   G RTV K WRGLG  LTT RPETWD+ A+ D +D I  VR  +GP VP+ GVG+S+GG++LTT  G   R+ HTL+ +VSVSGLFD+  M++H+     + YD +NA+VT+ NYKRF V D
Sbjct:   88 KAAFQSALNYPWAMIENPVSFA-----FVESEQNRTLVEAVKACGAYAPTPWVVSSIGGHIQSAMFAMWCPPKVWRQTGKMTCKKDLVKVRMHVCLQEGVCMYACKTDLVESSRDGGAFGVVWWDASAAGAPLPSTAPVVIMLPGVVGKPDNIYLKRMALHLAHRYGWRTVVKGWRGLGTELTTPRPETWDDTALQDLLDVIAYVRGTIGPGVPMFGVGFSFGGALLTTAVGTVPRAVHTLSAVVSVSGLFDFGSMLKHVETQWGWLYDAMNAKVTVANYKRFKVLD 369          
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: A0A7J6MLF4_PERCH (Alpha/beta hydrolase domain-containing protein 15 n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MLF4_PERCH)

HSP 1 Score: 105 bits (263), Expect = 2.460e-20
Identity = 79/255 (30.98%), Postives = 129/255 (50.59%), Query Frame = 2
Query:  164 WSSVRGTFGFSRPEVWFRETKENL-RLVAALPLEYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLR---QRRVVVSSSIDSGSFALDWW--EAGLSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLGMT-LTTRR--PETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRF-DRSKHTLAGIVSVSGLFDWAVMMR---HIRASASFYDWINARVTLMNYKRF 889
            W++     G S P + F +    + R    L   +WPS  A +   GH QS +FA +  P    A+K++     R  ++    D G+ ALDW      +  DAPIL ++PGVVG+S+N Y++ +  +       R V K WRG G + LT  R  PE WD  ++ D  + I+ + R   P+  ++G G+S G S+++++ G + D+    +AG+V +SG   +   M    H++     YDWIN  V   N +++
Sbjct:   70 WATYYIRTGHSTPRLQFSDNIAWIVRRCHTLRRGFWPSFAAFD---GHSQSAMFAVW--PGMSLALKKVSVEFAREDIIME--DGGTIALDWAVETEAVPEDAPILVMLPGVVGESHNPYMKSLIHYCRSRRQWRFVCKNWRGFGGSELTDERQVPEAWDARSVKDLYECIQHIHRRY-PEAKVLGCGFSLGASMMSSLVGHYKDQLNGLVAGVVCLSGPCSYETAMNRMYHLKPLP--YDWINMGVLWKNLRKY 314          
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: C5K5B1_PERM5 (Abhydrolase domain-containing protein, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5K5B1_PERM5)

HSP 1 Score: 99.0 bits (245), Expect = 3.100e-18
Identity = 76/249 (30.52%), Postives = 117/249 (46.99%), Query Frame = 2
Query:  188 GFSRPEVWFRE-TKENLRLVAALPLEYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLRQRRVVVSSSID-----SGSFALDWW--EAGLSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLG---MTLTTRRPETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRF-DRSKHTLAGIVSVSGLFDWAVM---MRHIRASASFYDWINARVTLMNYKRF 889
            G S P + F E     +R    L   +WP+  A +   GH QS +FA       W  M    +R  V     D      G+ ALDW      +  DAPIL ++PGVVG+S+N Y++ +  +       R V K WRG G   +T   + PE WD  ++ D    I+ + +   P   ++G G+S G S ++++ G + +  K  +AG+V +SG   +      M H++     YDWIN  V   N K++
Sbjct:   78 GHSTPRLQFSEGIAWIVRRCHTLRKGFWPTFGAFD---GHSQSTMFAF------WPGMSLALRRDTVEFEREDLTLEDGGTIALDWSVESEDVPEDAPILILLPGVVGESHNPYMKSLIHYCRCRRKWRFVCKNWRGFGDSELTDEKQVPEAWDARSVNDLYQCIQHIHKRY-PQAKVLGCGFSLGASTMSSLVGYYKEELKGIVAGVVCISGPCSYETALNRMYHLKPLP--YDWINMSVLWKNMKKY 314          
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: A0A7J6RUB5_PEROL (Alpha/beta hydrolase domain-containing protein 15 n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RUB5_PEROL)

HSP 1 Score: 97.8 bits (242), Expect = 7.670e-18
Identity = 73/247 (29.55%), Postives = 122/247 (49.39%), Query Frame = 2
Query:  188 GFSRPEVWFRETKENL-RLVAALPLEYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLR---QRRVVVSSSIDSGSFALDWWEAG--LSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLG---MTLTTRRPETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRFDRSKH-TLAGIVSVSGLFDWAVMMR---HIRASASFYDWINARVTLMNYKRF 889
            G S P + F +    + R    L   +WP+  A +   GH QS +FA +  P    A+KR     +R  ++    D G+ ALDW      +  DAP+L ++PGVVG+S+N Y++ +  +       R V K WRG G   +T   + PE WD  ++ D    ++ V +   P   ++G G+S G S+++++ G +    +  +AG+V +SG   +   M    H++     YDWIN  V   N +++
Sbjct:   78 GHSTPRLQFSDKIAWIVRRCHTLRKGFWPTFAAFD---GHSQSAMFAVW--PGMTLALKRATVEFEREDLIME--DGGTIALDWAVEAEEIPEDAPVLILLPGVVGESHNPYMKSLIHYCRCRRQWRFVCKNWRGFGGSELTDEKQIPEAWDARSVKDLYQCVQHVHKRY-PRAKVLGCGFSLGASMMSSLVGHYKEELNGVVAGVVCLSGPCSYETAMNRMYHLKPLP--YDWINMGVLWKNMRKY 314          
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: A0A7J6SXK9_PEROL (Alpha/beta hydrolase domain-containing protein 15 n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SXK9_PEROL)

HSP 1 Score: 96.3 bits (238), Expect = 5.170e-17
Identity = 73/247 (29.55%), Postives = 122/247 (49.39%), Query Frame = 2
Query:  188 GFSRPEVWFRETKENL-RLVAALPLEYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLR---QRRVVVSSSIDSGSFALDWWEAG--LSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLG---MTLTTRRPETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRFDRSKH-TLAGIVSVSGLFDWAVMMR---HIRASASFYDWINARVTLMNYKRF 889
            G S P + F +    + R    L   +WP+  A +   GH QS +FA +  P    A+KR     +R  ++    D G+ ALDW      +  DAP+L ++PGVVG+S+N Y++ +  +       R V K WRG G   +T   + PE WD  ++ D    ++ V +   P   ++G G+S G S+++++ G +    +  +AG+V +SG   +   M    H++     YDWIN  V   N +++
Sbjct:  177 GHSTPRLQFSDKIAWIVRRCRTLREGFWPTFAAFD---GHSQSAMFAVW--PGMTLALKRATVEFEREDLIME--DGGTIALDWAVEAEEIPEDAPVLILLPGVVGESHNPYMKSLIHYCRCRRQWRFVCKNWRGFGGSELTDEKQIPEAWDARSVKDLYLCVQHVHKRY-PRAKVLGCGFSLGASMMSSLVGHYKEELNGVVAGVVCLSGPCSYETAMNRMYHLKPLP--YDWINMGVLWKNMRKY 413          
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: A0A813WC08_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813WC08_9BILA)

HSP 1 Score: 82.8 bits (203), Expect = 4.180e-13
Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = 2
Query:  206 VWFRETKENLRLVAALP--LEYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLRQRRVVVSSSIDSGSFALDWWEAGLSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLGMTLTTRRPETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGR 742
            +    T+ NL+++   P   EY P+ W +N   GH+ + L   F      R +  L  +RV+++  ++ G  A+DW    L    PIL ++ G+ G S+N YIR +   AA   G   V    RG G++  T  P ++      D  + ++ +R+ VGPD P+ G+GYS G  VLT   G 
Sbjct:   45 ICMENTQRNLQIIRTCPQLTEYHPTSWIIN---GHLMTVLGVIF------RKLPSLTFKRVLLA--VEEGIIAVDWHTQPLPKQ-PILLLLHGLTGGSHNSYIRYMIK-AASKSGLCCVVTHARGCGLSDLTS-PRSFSGAWTGDVRETVKYIRKIVGPDTPVFGMGYSLGAGVLTKYIGE 211          
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: A0A815DF03_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A815DF03_ADIRI)

HSP 1 Score: 81.3 bits (199), Expect = 1.200e-12
Identity = 55/203 (27.09%), Postives = 97/203 (47.78%), Query Frame = 2
Query:  221 TKENLRLVAALP--LEYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLRQRRVVVSSSIDSGSFALDWWEAGLSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLGMTLTTRRPETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRFDRSKHTLAGIVSVSGLFDWAVMMRHI 823
            T+EN  L++     +EY P+PW  N   GH+ +     F      R +  +   RV++S   + G+ A+DW         P+L ++ G+ G S+N YIR + ++A   L    V    RG G +  T  P++++        ++++ +R  VG + PI  VGYS G  +L    G+ + S  +L G +     FD  +  +++
Sbjct:   42 TRENQYLISECSSLVEYRPTPWIFN---GHIMTVFGVLF------RPLLSMSFERVLLSIDAEGGTIAIDWHRQPRPRQ-PVLLILHGLTGGSDNEYIRWMISYATSKLDLCCVVTHARGCGKSKLTS-PKSFNASNTDHVQESLKYIRSRVGDETPIFAVGYSLGAGILAKFLGK-EGSDCSLQGAIVCCASFDMHLSSKNL 232          
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: A0A814X180_9BILA (Hypothetical protein n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A814X180_9BILA)

HSP 1 Score: 73.6 bits (179), Expect = 4.150e-10
Identity = 64/226 (28.32%), Postives = 100/226 (44.25%), Query Frame = 2
Query:  221 TKENLRLVAALPL--EYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLRQRRVVVSSSIDSGSFALDWWEAGLSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLGMTLTTRRPETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRFDRSKHTLAGIVSVSGLFDWAVMMRHIRASASFYDWINARVT--LMNYKR 886
            T+EN  ++   P   EY P+PW  N   GH  + L   F      R +  +  +R+++      G+ A+DW +       PIL ++ G+ G S+N YIR +   A   L    V    RG G +  T  P ++      D   +I+ +R  VG   P+  VGYS G  +LT   G  + ++  L G V     FD  +   ++      Y + N R+T  L+ Y R
Sbjct:   43 TEENQFIINKCPSFKEYRPTPWIFN---GHFMTILGVMF------RPLPNVLYQRILLPVDDIGGTIAIDWHKQPYEGQ-PILVILHGLTGGSDNEYIRWMTLSAYSKLNICCVVIHARGCGRSELTS-PRSFCAADTNDLRISIKYIRSIVGNHTPLFAVGYSLGAGILTKYIGE-ESNRCPLDGAVVCCASFDMHLSTANMEQLLHIYTY-NRRLTNNLIRYIR 255          
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Match: A0A815I359_9BILA (Hypothetical protein n=5 Tax=Adineta steineri TaxID=433720 RepID=A0A815I359_9BILA)

HSP 1 Score: 73.2 bits (178), Expect = 5.560e-10
Identity = 59/220 (26.82%), Postives = 101/220 (45.91%), Query Frame = 2
Query:  215 RETKENLRLVAALP--LEYWPSPWALNPMGGHVQSFLFATFCGPRRWRAMKRLRQRRVVVSSSIDSGSFALDWWEAGLSADAPILFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLGMT-LTTRRPETWDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRFDRSKHTLAGIVSVSGLFDWAVMMRHIRASASFYDWINARV 865
            + TKEN  L+   P   +Y P+PW  +   GH+ + L   F      R +  L   R+++      G+ A+DW         PIL ++ G+ G S+N Y+R +   A++      V    RG G + LTT +  ++      D   +++ +R  +G + PI  VGYS G  +LT   G  + ++ ++ G +     F+      H+  S +   W+N RV
Sbjct:   40 QSTKENEFLINQCPSFAQYRPTPWIFS---GHLMTILGVFF------RPLPTLSFERILLKVDNTGGTIAMDWHSRPYVRQ-PILLILHGLTGGSDNEYVRWMILAASKKFNLCCVVSHARGCGKSKLTTAK--SFCAANTDDVRASVKYIRSIIGEETPIFAVGYSLGAGILTKYLGE-EGTQCSIQGAIICCASFNM-----HLSTS-NLEQWLNTRV 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8023.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIE2_ECTSI5.350e-8536.74Abhydrolase domain-containing protein, putative n=... [more]
A0A835YXD5_9STRA2.180e-5940.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7J6MLF4_PERCH2.460e-2030.98Alpha/beta hydrolase domain-containing protein 15 ... [more]
C5K5B1_PERM53.100e-1830.52Abhydrolase domain-containing protein, putative n=... [more]
A0A7J6RUB5_PEROL7.670e-1829.55Alpha/beta hydrolase domain-containing protein 15 ... [more]
A0A7J6SXK9_PEROL5.170e-1729.55Alpha/beta hydrolase domain-containing protein 15 ... [more]
A0A813WC08_9BILA4.180e-1331.49Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A815DF03_ADIRI1.200e-1227.09Hypothetical protein n=2 Tax=Adineta ricciae TaxID... [more]
A0A814X180_9BILA4.150e-1028.32Hypothetical protein n=4 Tax=Rotaria sordida TaxID... [more]
A0A815I359_9BILA5.560e-1026.82Hypothetical protein n=5 Tax=Adineta steineri TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8023contigP-wetherbeei_contig8023:192..2915 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIE2
PFAMsAbhydrolase_1,Hydrolase_4
Model size2176
Max annot lvl2759|Eukaryota
KEGG koko:K13696
Hectar predicted targeting categorysignal anchor
Exons3
Evalue1.68e-87
EggNOG OGsCOG0429@1|root,KOG1838@2759|Eukaryota
Ec32 ortholog descriptionAlpha/beta hydrolase fold-1
Ec32 orthologEc-11_001570.1
Descriptionacylglycerol lipase activity
Cds size1707
COG categoryO
BRITEko00000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187016.4090939-UTR-P-wetherbeei_contig8023:191..2011683187016.4090939-UTR-P-wetherbeei_contig8023:191..201Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8023 192..201 +
1683187016.455049-UTR-P-wetherbeei_contig8023:2456..29151683187016.455049-UTR-P-wetherbeei_contig8023:2456..2915Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8023 2457..2915 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187016.4238677-CDS-P-wetherbeei_contig8023:201..6901683187016.4238677-CDS-P-wetherbeei_contig8023:201..690Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8023 202..690 +
1683187016.435004-CDS-P-wetherbeei_contig8023:902..10341683187016.435004-CDS-P-wetherbeei_contig8023:902..1034Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8023 903..1034 +
1683187016.4451985-CDS-P-wetherbeei_contig8023:1370..24561683187016.4451985-CDS-P-wetherbeei_contig8023:1370..2456Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8023 1371..2456 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8023.1.1prot_P-wetherbeei_contig8023.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8023 202..2456 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8023.1.1

>prot_P-wetherbeei_contig8023.1.1 ID=prot_P-wetherbeei_contig8023.1.1|Name=mRNA_P-wetherbeei_contig8023.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=569bp
MSFQQLAWTLVGFKQPHSSRGTAFLVFSGFLLFTWLLRRWRKLFNSYFGE
GWSSVRGTFGFSRPEVWFRETKENLRLVAALPLEYWPSPWALNPMGGHVQ
SFLFATFCGPRRWRAMKRLRQRRVVVSSSIDSGSFALDWWEAGLSADAPI
LFVMPGVVGKSNNIYIRRIAAHAAEHLGARTVAKAWRGLGMTLTTRRPET
WDEVAILDTMDAIRAVRREVGPDVPIIGVGYSYGGSVLTTIAGRFDRSKH
TLAGIVSVSGLFDWAVMMRHIRASASFYDWINARVTLMNYKRFGVFDALA
AGVVAGAAAGRGAAGTAGAVGAAAGAAMVGLAAGGGAAAAAAVAATKAPA
GKGGQSVPTVAQQTAPASENDEDDDDDDDAVAMAPASEPPPQSPRTGKRP
ASLSSAPAPATRALTVMPQPQPLLRSPPPAPESWRPPSHEQVLAIKNHTS
FHEALTIPFSGDADVDTYNARLQALQLSAIAGVDVPVLALLARDDPVCPP
LAWERALAAAAANPAFVVVVTDRGGHCGFFEGVFGDSWLDRIIEQFSRAL
LERPGAPSSSEGSLSSPS*
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mRNA from alignment at P-wetherbeei_contig8023:192..2915+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8023.1.1 ID=mRNA_P-wetherbeei_contig8023.1.1|Name=mRNA_P-wetherbeei_contig8023.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2724bp|location=Sequence derived from alignment at P-wetherbeei_contig8023:192..2915+ (Phaeothamnion wetherbeei SAG_119_79)
CTTTGAGGACATGTCCTTCCAGCAGCTGGCGTGGACCCTCGTGGGGTTCA AACAGCCCCACTCTTCGAGAGGGACAGCATTTCTTGTGTTCTCGGGTTTT CTCCTGTTCACGTGGCTCCTTCGGCGATGGCGAAAACTTTTCAACTCGTA TTTTGGCGAGGGATGGTCGTCTGTCCGCGGCACGTTTGGCTTTTCCAGGC CAGAAGTCTGGTTTCGAGAGACGAAAGAAAACCTTCGGTTGGTCGCTGCT CTCCCTCTCGAGTACTGGCCGTCCCCGTGGGCGCTCAATCCAATGGGTGG ACACGTTCAATCGTTCCTCTTCGCCACGTTCTGCGGGCCGCGGCGATGGC GGGCGATGAAGCGATTGCGACAAAGGAGGGTGGTTGTGAGCTCAAGCATC GACTCGGGCTCCTTCGCGCTCGACTGGTGGGAGGCGGGGCTCTCGGCTGA TGCGCCAATCCTCTTCGTTATGCCCGGTGTCGTGGGAAAGTCGAATAATG TGAGTTCTCAGGAGAATGCAGTGCAACGATCTGCTTGCCACTCATTGGGT GTTCTATCCGGCGTTCTTGGGGCTCGTTATGCAGCATTGGCACTTCGTTT GACCCTCACACTGTGTATAAAACCTTCTTTTCCCCTGTCATCGTTTTCCA TCGGCCTCTATCCCATGCCGCCACGGCCCGACATACTGGGTACGTCTTTG CCTCATCGCAGATCTACATCCGCCGAATCGCGGCGCACGCGGCGGAGCAC CTCGGCGCCCGCACCGTCGCCAAGGCGTGGCGCGGCCTTGGAATGACGCT GACCACGAGAAGGCCGGAGACCTGGGACGAGGTTGCCATCCTGGTGAGGA CCGTGCCGGGTCCGGTTTGGCGCGGAATCACCTCGCTGTTTGGAGTAGCG GACCATTTCTTTTGACCTGCTGGCCTCGTGCACAGTTGGAAGATCTACCG CTCTGGAGTCCACAATCGCCTGTAATAAATTGCTGACCTTCCAAGTGCGA CTTGTGAAATCTGAATTTGCTTTTGTGAAACTCTTTCAGGCCGGCCCTTC GGCTGGCAAACGGGAACGGCATTTGATCGCGTTCACACTGTTGGATTTAA AGTTATTCGGTTACCTTCCGAAATACAGTTTGAAGAGGTTGTGTTCTTAG TTTGTTTTCCGTCGTTCCTTCCCCCACAGGACACGATGGACGCGATCCGG GCGGTCCGGCGGGAGGTCGGACCCGACGTGCCGATTATCGGCGTCGGCTA CAGCTACGGCGGCTCGGTGCTGACGACCATCGCGGGCCGCTTCGACCGGT CGAAGCACACGCTGGCCGGCATCGTGTCCGTTTCGGGGCTGTTCGATTGG GCGGTCATGATGCGGCACATCCGTGCGTCGGCATCGTTTTACGATTGGAT CAATGCGCGCGTCACGCTCATGAACTACAAACGGTTCGGTGTCTTTGACG CCCTCGCGGCGGGAGTGGTGGCCGGGGCGGCGGCGGGGCGCGGAGCGGCA GGAACGGCGGGAGCGGTGGGAGCAGCAGCTGGCGCGGCAATGGTGGGCTT AGCAGCAGGAGGTGGAGCAGCGGCGGCGGCCGCAGTGGCGGCAACGAAGG CACCAGCAGGAAAGGGCGGGCAATCTGTTCCAACCGTGGCCCAGCAGACG GCACCGGCGTCAGAAAATGACGAAGACGACGATGACGACGACGACGCGGT CGCAATGGCCCCGGCGTCCGAGCCGCCGCCGCAGTCCCCACGCACAGGGA AGAGGCCAGCATCTTTGTCATCTGCACCGGCACCGGCGACGCGGGCGCTT ACAGTCATGCCGCAGCCGCAGCCGCTGCTGCGCTCGCCGCCGCCGGCGCC CGAGTCGTGGCGGCCGCCGAGCCACGAACAGGTTCTCGCCATCAAGAACC ACACGTCTTTCCACGAAGCGCTGACCATTCCCTTTTCGGGCGACGCCGAC GTTGACACCTACAACGCCCGGCTGCAGGCGCTGCAACTGTCGGCGATCGC TGGCGTCGACGTGCCCGTGCTGGCGCTTCTGGCGCGCGACGACCCGGTCT GCCCGCCGCTGGCGTGGGAACGGGCGCTGGCAGCGGCGGCGGCGAACCCT GCATTCGTCGTGGTGGTGACGGACCGCGGTGGCCACTGCGGCTTCTTCGA GGGCGTGTTTGGCGACTCGTGGCTGGACCGGATCATAGAGCAGTTCTCGC GGGCGCTGCTGGAGCGGCCGGGGGCGCCATCGTCGTCAGAGGGGTCTTTG TCATCGCCTTCGTAGTCATCGGAGGGAACGGCAGCGGGAAGGATAGCGGC GGAGGCGGCGGCTGGCGCGTCGGTCAACGCGGCATGCTGTCAGTGGTCGA TTGCTGTGACAGCGGTGGCGGCGCTTGTGCTGGTGCTGGCGGCGACGCTG GTGCTAAAGGCGTTGGCGTTGGTGGCGGCCCGACAACCGTCGTGCGCTAC CTGTTATGTGTGTTGGTGTGCTGAGGGTCGCGCGACAGCGCAGCTCTTCT GCGCTTGCGGGGACCGGGAAGGAATACAGGGGAAGGGCAAAACAGCAATG CGTGTTCTCCGAGGAGGGCGGAGGGGGAGGAGAAAAATCAGAATCTTTGC GCGGTTTCCGGGGGAGCGAAAGCTGCTCTTTCTTGCCTGGTGGACGCTTC AGCGGGCCTCCAGTTCACGGCGAGGCGACTGAAGGACAACTTCCCAACAC GGCGGGGCGGGGAGGACGGGAAAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8023:192..2915+

>mRNA_P-wetherbeei_contig8023.1.1 ID=mRNA_P-wetherbeei_contig8023.1.1|Name=mRNA_P-wetherbeei_contig8023.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1707bp|location=Sequence derived from alignment at P-wetherbeei_contig8023:192..2915+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCTTCCAGCAGCTGGCGTGGACCCTCGTGGGGTTCAAACAGCCCCA
CTCTTCGAGAGGGACAGCATTTCTTGTGTTCTCGGGTTTTCTCCTGTTCA
CGTGGCTCCTTCGGCGATGGCGAAAACTTTTCAACTCGTATTTTGGCGAG
GGATGGTCGTCTGTCCGCGGCACGTTTGGCTTTTCCAGGCCAGAAGTCTG
GTTTCGAGAGACGAAAGAAAACCTTCGGTTGGTCGCTGCTCTCCCTCTCG
AGTACTGGCCGTCCCCGTGGGCGCTCAATCCAATGGGTGGACACGTTCAA
TCGTTCCTCTTCGCCACGTTCTGCGGGCCGCGGCGATGGCGGGCGATGAA
GCGATTGCGACAAAGGAGGGTGGTTGTGAGCTCAAGCATCGACTCGGGCT
CCTTCGCGCTCGACTGGTGGGAGGCGGGGCTCTCGGCTGATGCGCCAATC
CTCTTCGTTATGCCCGGTGTCGTGGGAAAGTCGAATAATATCTACATCCG
CCGAATCGCGGCGCACGCGGCGGAGCACCTCGGCGCCCGCACCGTCGCCA
AGGCGTGGCGCGGCCTTGGAATGACGCTGACCACGAGAAGGCCGGAGACC
TGGGACGAGGTTGCCATCCTGGACACGATGGACGCGATCCGGGCGGTCCG
GCGGGAGGTCGGACCCGACGTGCCGATTATCGGCGTCGGCTACAGCTACG
GCGGCTCGGTGCTGACGACCATCGCGGGCCGCTTCGACCGGTCGAAGCAC
ACGCTGGCCGGCATCGTGTCCGTTTCGGGGCTGTTCGATTGGGCGGTCAT
GATGCGGCACATCCGTGCGTCGGCATCGTTTTACGATTGGATCAATGCGC
GCGTCACGCTCATGAACTACAAACGGTTCGGTGTCTTTGACGCCCTCGCG
GCGGGAGTGGTGGCCGGGGCGGCGGCGGGGCGCGGAGCGGCAGGAACGGC
GGGAGCGGTGGGAGCAGCAGCTGGCGCGGCAATGGTGGGCTTAGCAGCAG
GAGGTGGAGCAGCGGCGGCGGCCGCAGTGGCGGCAACGAAGGCACCAGCA
GGAAAGGGCGGGCAATCTGTTCCAACCGTGGCCCAGCAGACGGCACCGGC
GTCAGAAAATGACGAAGACGACGATGACGACGACGACGCGGTCGCAATGG
CCCCGGCGTCCGAGCCGCCGCCGCAGTCCCCACGCACAGGGAAGAGGCCA
GCATCTTTGTCATCTGCACCGGCACCGGCGACGCGGGCGCTTACAGTCAT
GCCGCAGCCGCAGCCGCTGCTGCGCTCGCCGCCGCCGGCGCCCGAGTCGT
GGCGGCCGCCGAGCCACGAACAGGTTCTCGCCATCAAGAACCACACGTCT
TTCCACGAAGCGCTGACCATTCCCTTTTCGGGCGACGCCGACGTTGACAC
CTACAACGCCCGGCTGCAGGCGCTGCAACTGTCGGCGATCGCTGGCGTCG
ACGTGCCCGTGCTGGCGCTTCTGGCGCGCGACGACCCGGTCTGCCCGCCG
CTGGCGTGGGAACGGGCGCTGGCAGCGGCGGCGGCGAACCCTGCATTCGT
CGTGGTGGTGACGGACCGCGGTGGCCACTGCGGCTTCTTCGAGGGCGTGT
TTGGCGACTCGTGGCTGGACCGGATCATAGAGCAGTTCTCGCGGGCGCTG
CTGGAGCGGCCGGGGGCGCCATCGTCGTCAGAGGGGTCTTTGTCATCGCC
TTCGTAG
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