mRNA_P-wetherbeei_contig8020.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8020.1.4
Unique NamemRNA_P-wetherbeei_contig8020.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: A0A6H5KKU1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKU1_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 1.350e-81
Identity = 135/211 (63.98%), Postives = 165/211 (78.20%), Query Frame = 1
Query:  277 YRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLEV 909
            YRVLAT  T+G++EFV  S P+SAVL  H    +L +LR H  DP GPLG+ R A+D + RS AG CV+TYLLGVGDRHLDN+M+  +G LFHIDFG++FGKDPKLMPPPFRLT++MV+AMGG  + HYTVF+SLC +AY  LR+SAHQ+LNLLSLM  AGIKDL DD    L+ +Q RF+L+L+D  AD HF SL+ QS+ ALAPRVLEV
Sbjct: 1243 YRVLATSLTTGMIEFVPGSVPMSAVLATHNN-SVLDFLRHHNADPGGPLGMKREALDNFTRSCAGSCVVTYLLGVGDRHLDNLMLLPEGVLFHIDFGYLFGKDPKLMPPPFRLTKEMVEAMGGTEAPHYTVFKSLCCQAYRHLRKSAHQYLNLLSLMSGAGIKDLSDDPAAVLQLVQDRFKLDLTDEQADAHFLSLVSQSMTALAPRVLEV 1452          
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: A0A7S3XVP8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVP8_HETAK)

HSP 1 Score: 234 bits (598), Expect = 7.380e-73
Identity = 117/211 (55.45%), Postives = 153/211 (72.51%), Query Frame = 1
Query:  274 PYRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLE 906
            PYR+LATG   G++EFV  S P+SA+ +++ G  IL +LR    D  GP+GV+   MDT+++STAGYCV+TYLLG+GDRHLDN+MM  DG LFHIDFG++ G+DPK +PPPFRLT +M  AMGG + A Y  F+S C +AY CLR  A   L+LL LM DAGI+ L++D  G L K + +FRLELSDA A+R F  L+ +SL A+A R+ E
Sbjct:   62 PYRILATGAKDGMMEFVEGSLPVSAINKKYPG-SILEFLRASAPDAGGPMGVAAEVMDTFVKSTAGYCVVTYLLGIGDRHLDNLMMLPDGRLFHIDFGWILGRDPKPLPPPFRLTAEMAAAMGGAAGAPYRAFQSYCCQAYNCLRARAPLLLSLLGLMADAGIEALQEDPQGVLAKTEEKFRLELSDAQAERFFLGLVRESLTAVAARINE 271          
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: F0X0S3_9STRA (Phosphatidylinositol 3-kinase n=2 Tax=Albugo TaxID=65356 RepID=F0X0S3_9STRA)

HSP 1 Score: 249 bits (635), Expect = 6.360e-72
Identity = 119/211 (56.40%), Postives = 158/211 (74.88%), Query Frame = 1
Query:  274 PYRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLE 906
            PYR+LATG  +GL+EFV +S P+S V+       +L +LR+H  DP G  GV+  A+  Y++S AGYCVLTYLLG+GDRHLDN+MMKT G LFHIDFGF+FG DPKL+PPPF+LT++MV+ MGGL S HY  F++ C +AY  LR+SA   LNLLSLM+DAGI++L +D   TL+K+Q +FRL+L+D  A++ F  LI  S+ AL P ++E
Sbjct:  795 PYRILATGTDNGLMEFVQDSYPVSYVVSNFESPQVLSFLRKHHPDPHGDYGVAPEALSNYIKSVAGYCVLTYLLGIGDRHLDNLMMKTQGHLFHIDFGFIFGADPKLLPPPFKLTKEMVEGMGGLESVHYLRFKTYCCQAYNWLRKSADLILNLLSLMIDAGIEELTNDPETTLQKVQEKFRLDLTDEQAEQFFLGLINDSVTALFPVLME 1005          
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: A0A7R9UE18_9STRA (Phosphatidylinositol 3-kinase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE18_9STRA)

HSP 1 Score: 245 bits (625), Expect = 3.100e-71
Identity = 118/213 (55.40%), Postives = 157/213 (73.71%), Query Frame = 1
Query:  271 QPYRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLEV 909
            +PY  LATG   G++EFV  STP+S VL +  G  IL YL+ H  DP GP GV+   M T+++S AGYCV+TY+LGVGDRHLDNIM++T G LFH+DFGF+FG+DPK +PPPFR TR+M +AMGG  S HY  F++   +AY  LR+SA+  LN+LSLM DAGI+DL++D   TL K+Q RFRL+L+D  A+     L+ +SL +LAP+V+E+
Sbjct:  640 RPYVTLATGADDGIIEFVTNSTPVSGVLAKFNG-SILAYLKHHNPDPEGPYGVTPECMSTFVKSCAGYCVITYILGVGDRHLDNIMLQTAGNLFHLDFGFIFGRDPKPLPPPFRFTREMAEAMGGEQSEHYARFKTYMCQAYNWLRKSANLILNMLSLMADAGIEDLRNDPDATLAKVQERFRLDLTDEQAEHFMLQLLNESLTSLAPQVMEI 851          
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: A0A7S0FRS7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FRS7_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.970e-69
Identity = 120/217 (55.30%), Postives = 150/217 (69.12%), Query Frame = 1
Query:  271 QPYRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKD----DIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLEV 909
            +PY +LAT  ++GLVEFV  S P+S VL  +    IL +L++         G+    M TYLRS AGYCV+TYLLGVGDRHLDNIM+   G  FHIDFGF+FG+DPK +PP FRLTR+MVD MGG+ SA Y  FRSL  +A+  LR+SA   LNLL LM +AGI+DL +    D  G + K++ RFRLEL+D  A+ +F  LI  SLNALAPRV+EV
Sbjct:   10 KPYAILATSASTGLVEFVDGSIPISQVLANNNN-SILQFLKKSAPRQGAKYGIDSDVMQTYLRSCAGYCVITYLLGVGDRHLDNIMLLPSGHFFHIDFGFIFGRDPKPLPPAFRLTREMVDGMGGVDSADYARFRSLSCQAFNTLRKSAGLVLNLLHLMGEAGIEDLSNNPAADAEGVIAKVEERFRLELTDEQAEAYFLGLIDDSLNALAPRVMEV 225          
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: K3X9V2_GLOUD (Phosphatidylinositol 3-kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9V2_GLOUD)

HSP 1 Score: 241 bits (615), Expect = 4.090e-69
Identity = 116/211 (54.98%), Postives = 156/211 (73.93%), Query Frame = 1
Query:  274 PYRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLE 906
            PYR+LATG   GL+EFV +S P+S V+ +     +LG+LR+H  DP    GV+  A++TY++S AGYCVLTYLLG+GDRHLDN+MMKT+G L HIDFGF+FG DPK  PPPF+LT++MV+ MGG+ S HY  F++ C +A+  LR+SA   LNLLSLM DAGI++L +D   TL+K+Q +FRL+L+D  A+  F  LI  S+ AL P ++E
Sbjct:  796 PYRILATGANDGLMEFVQDSYPVSYVVSKFESPQVLGFLRKHNPDPLAEYGVNPEALNTYVKSVAGYCVLTYLLGIGDRHLDNLMMKTEGHLLHIDFGFIFGADPKPYPPPFKLTKEMVEGMGGVQSQHYLKFQTYCCQAFNWLRKSADLILNLLSLMADAGIEELSNDPETTLQKVQEKFRLDLTDEQAEHFFLGLITDSVTALFPVLME 1006          
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: A0A2D4C1P5_PYTIN (Phosphatidylinositol 3-kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1P5_PYTIN)

HSP 1 Score: 238 bits (608), Expect = 5.490e-68
Identity = 117/211 (55.45%), Postives = 151/211 (71.56%), Query Frame = 1
Query:  274 PYRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLE 906
            PYR+LATG T GL+EFV +S P+S ++       IL +LR H  DP GP  VS  A+  Y++S AGYCVLTY+LG+GDRHLDN+MMKT G LFHIDFGF+FG DPK  PPPF+LT++MV+ MGG  S HY  F++ C +AY  LR+SA   LNLLSLM D GI+ L +D   TL+K+Q +FRL+L+D  A++ F  LI  S+ AL P ++E
Sbjct:  847 PYRILATGTTDGLMEFVQDSVPVSYIVANFESPQILSFLRSHHPDPNGPYRVSAEALSNYVKSVAGYCVLTYILGIGDRHLDNLMMKTAGHLFHIDFGFIFGADPKPYPPPFKLTKEMVEGMGGPESEHYLKFKTYCCQAYNWLRKSADLILNLLSLMADGGIEMLSNDPETTLQKVQEKFRLDLTDEQAEQFFLGLINDSVTALFPVLVE 1057          
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: A0A0W8CJK0_PHYNI (Phosphatidylinositol 3-kinase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CJK0_PHYNI)

HSP 1 Score: 234 bits (597), Expect = 6.130e-67
Identity = 112/211 (53.08%), Postives = 154/211 (72.99%), Query Frame = 1
Query:  274 PYRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLE 906
            PYR+LATG   GL+EFV +S P+S V+       I+G+LR+H  DP+   G++  A+ TY++S AGYCVLTYLLG+GDRHLDN+MMK +G LFHIDFGF+FG DPK  PPPF+LT++MV+ MGG +S HY  F + C +AY  LR+SA   LNLLSLM D+GI++L  +   TL K++ +FRL+L+D  A++ F  LI  S++AL P +++
Sbjct:  703 PYRILATGANDGLMEFVQDSYPVSYVVSHFESPQIVGFLRKHNPDPSAEFGIAPEALSTYVKSVAGYCVLTYLLGIGDRHLDNLMMKAEGHLFHIDFGFVFGADPKPYPPPFKLTKEMVEGMGGPTSEHYQKFTTYCCQAYNWLRKSADLILNLLSLMADSGIEELSANPATTLLKVEEKFRLDLTDEQAEQFFLGLINDSVSALFPLLVD 913          
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: A0A8K1CPH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPH6_PYTOL)

HSP 1 Score: 234 bits (598), Expect = 8.600e-67
Identity = 110/212 (51.89%), Postives = 155/212 (73.11%), Query Frame = 1
Query:  274 PYRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLEV 909
            PYR+LATG   GL+EFV +S P+S ++++     +L +LR+H+ DP+   GVS  A+  Y++S AGYCV+TY+LG+GDRHLDN+MMK+ G LFHIDFGF+FG DPK +PPPF+LT++MV+ MGG  S HY  F++ C +AY  LR+SA   LNLLSLM D GI+   +D   TL+K+Q +FRL+L+D  A++ F  LI  S+ +L P V+++
Sbjct:  780 PYRILATGLNDGLMEFVQDSYPVSYIVEKFESPQVLSFLRKHQPDPSAEFGVSPEALSNYVKSVAGYCVVTYILGIGDRHLDNLMMKSQGHLFHIDFGFIFGADPKPLPPPFKLTKEMVEGMGGPDSEHYLKFKTYCCQAYNWLRKSADLILNLLSLMADGGIEGFANDPETTLQKVQEKFRLDLTDEQAEQFFLGLINDSVRSLFPVVVDI 991          
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Match: H3H3A8_PHYRM (Phosphatidylinositol 3-kinase n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3H3A8_PHYRM)

HSP 1 Score: 233 bits (595), Expect = 1.670e-66
Identity = 111/211 (52.61%), Postives = 154/211 (72.99%), Query Frame = 1
Query:  274 PYRVLATGPTSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDTYLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMPPPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMVDAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRVLE 906
            PYR+LATG   GL+EFV +S P+S V+       I+G+LR+H  DP+   G++  A+ TY++S AGYCVLTYLLG+GDRHLDN+MMK +G +FHIDFGF+FG DPK  PPPF+LT++MV+ MGG +S HY  F + C +AY  LR+SA   LNLLSLM D+GI++L  +   TL K++ +FRL+L+D  A++ F  LI  S++AL P +++
Sbjct:  742 PYRILATGANDGLMEFVQDSYPVSYVVSHFESPQIVGFLRKHNPDPSAEFGIAPEALSTYVKSVAGYCVLTYLLGIGDRHLDNLMMKAEGHMFHIDFGFVFGADPKPYPPPFKLTKEMVEGMGGPTSEHYQKFTTYCCQAYNWLRKSADLILNLLSLMADSGIEELSANPATTLLKVEEKFRLDLTDEQAEQFFLGLINDSVSALFPLLVD 952          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8020.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKU1_9PHAE1.350e-8163.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XVP8_HETAK7.380e-7355.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0X0S3_9STRA6.360e-7256.40Phosphatidylinositol 3-kinase n=2 Tax=Albugo TaxID... [more]
A0A7R9UE18_9STRA3.100e-7155.40Phosphatidylinositol 3-kinase n=1 Tax=Pinguiococcu... [more]
A0A7S0FRS7_9STRA1.970e-6955.30Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
K3X9V2_GLOUD4.090e-6954.98Phosphatidylinositol 3-kinase n=1 Tax=Globisporang... [more]
A0A2D4C1P5_PYTIN5.490e-6855.45Phosphatidylinositol 3-kinase n=1 Tax=Pythium insi... [more]
A0A0W8CJK0_PHYNI6.130e-6753.08Phosphatidylinositol 3-kinase n=5 Tax=Phytophthora... [more]
A0A8K1CPH6_PYTOL8.600e-6751.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3H3A8_PHYRM1.670e-6652.61Phosphatidylinositol 3-kinase n=23 Tax=Peronospora... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8020contigP-wetherbeei_contig8020:627..2069 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LNH7
PFAMsDUF3480,FYVE,PI3K_C2,PI3Ka,PI3_PI4_kinase
Model size909
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K00914,ko:K04679
KEGG ReactionR03362
KEGG Pathwayko00562,ko01100,ko04070,ko04136,ko04138,ko04140,ko04144,ko04145,ko04350,ko04371,ko05152,ko05167,map00562,map01100,map04070,map04136,map04138,map04140,map04144,map04145,map04350,map04371,map05152,map05167
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005543,GO:0008289,GO:0032266,GO:0035091,GO:0043167,GO:0043168,GO:1901981
Exons3
Evalue3.78e-82
EggNOG OGsCOG5032@1|root,KOG1841@1|root,KOG0906@2759|Eukaryota,KOG1841@2759|Eukaryota
Ec32 ortholog descriptionputative phosphatidylinositol 3-kinase
Ec32 orthologEc-04_003810.1
EC2.7.1.137
Description1-phosphatidylinositol binding
Cds size909
COG categoryS
BRITEko00000,ko00001,ko01000,ko01009,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187016.2337065-CDS-P-wetherbeei_contig8020:626..7781683187016.2337065-CDS-P-wetherbeei_contig8020:626..778Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8020 627..778 -
1683187016.246764-CDS-P-wetherbeei_contig8020:1035..12111683187016.246764-CDS-P-wetherbeei_contig8020:1035..1211Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8020 1036..1211 -
1683187016.2612126-CDS-P-wetherbeei_contig8020:1488..20691683187016.2612126-CDS-P-wetherbeei_contig8020:1488..2069Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8020 1489..2069 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8020.1.4prot_P-wetherbeei_contig8020.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8020 627..2069 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8020.1.4

>prot_P-wetherbeei_contig8020.1.4 ID=prot_P-wetherbeei_contig8020.1.4|Name=mRNA_P-wetherbeei_contig8020.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=303bp
PIPCPQFLLRCYFPVPASFPFMPSGLVCSRLLPPFTVRCGPFRPHPAEFL
RSPPFHSATSRPVPSRRLPSRPVPSRPVRSRSARSRPASAQPYRVLATGP
TSGLVEFVAESTPLSAVLQQHAGLGILGYLRRHRGDPAGPLGVSRAAMDT
YLRSTAGYCVLTYLLGVGDRHLDNIMMKTDGALFHIDFGFMFGKDPKLMP
PPFRLTRDMVDAMGGLSSAHYTVFRSLCVRAYLCLRRSAHQFLNLLSLMV
DAGIKDLKDDIGGTLEKIQGRFRLELSDADADRHFNSLIGQSLNALAPRV
LEV
back to top

mRNA from alignment at P-wetherbeei_contig8020:627..2069-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8020.1.4 ID=mRNA_P-wetherbeei_contig8020.1.4|Name=mRNA_P-wetherbeei_contig8020.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1443bp|location=Sequence derived from alignment at P-wetherbeei_contig8020:627..2069- (Phaeothamnion wetherbeei SAG_119_79)
CCCATTCCTTGCCCGCAATTCCTTTTGCGCTGCTACTTTCCTGTTCCCGC CTCCTTCCCCTTTATGCCGTCCGGTCTGGTCTGCTCCCGCCTCCTCCCAC CTTTTACCGTCCGGTGCGGTCCATTCCGGCCCCATCCCGCCGAATTCCTC CGATCTCCCCCATTCCACTCTGCCACGTCCCGCCCGGTCCCGTCCCGCCG GCTCCCGTCCCGCCCGGTCCCGTCCCGCCCGGTCCGGTCCCGTTCCGCAC GGTCCCGTCCCGCGTCTGCCCAGCCGTACCGCGTTCTTGCGACGGGCCCC ACCTCGGGGCTCGTCGAGTTCGTGGCCGAGTCGACGCCGCTATCGGCCGT CCTGCAGCAGCACGCAGGCCTCGGCATCCTCGGCTACCTGCGGCGGCACC GCGGCGACCCGGCGGGTCCCTTGGGCGTGTCGCGGGCGGCCATGGACACG TACCTTCGCAGCACGGCGGGCTACTGCGTGCTGACGTACTTGCTGGGCGT CGGGGACCGGCATCTGGATAACATCATGATGAAGACGGACGGCGCGCTCT TCCACATCGACTTTGGCTTCATGTTCGGAAAGTGGGTGCGCTCGCTTTGC TGGTTGATTATTGTGCCCTCCATAGCTACTGCGTGTGTGGGGCTCGATTA CCACACACGTCATTCTAGTGAGGGTTTCAGTAAATTTCAGTCGTGCGGCT GCTTCCATAGGCTGCTTCCATGTGGGTGCTGGCATCAGCGGGCCTTGTGT TGTGATCACTGTTTTCTTGTTCTCTCTCTCTGTCATTCCCTCTGTCTCCG CCGCTCCTGCCATCGTTCCTGTTGCGATCTTTCGCTCCCTCCTGCCGTGT TCCTGCAGGGACCCGAAGCTGATGCCGCCGCCGTTTCGGCTGACGCGTGA CATGGTGGACGCGATGGGCGGCCTCAGCAGCGCCCACTACACCGTATTCC GCTCGCTCTGCGTGCGGGCGTACCTCTGCCTTCGCCGCTCCGCGCACCAG TTCCTCAACCTTCTGTCGCTGATGGTAGATGCCGGTGAGCCGGCTTTCTG TTGCTTAATGAATGGGCTGTCTGCCAAGCAACGGTCGAGAGAGAGGTCTG AAATCGACTGCAGCCATGTGATCTGCGGGGATGGAAGTAAACAGCGGCCC GTTGTCGACATGTCAGGTTTCGACAGTGTTAGCTGACGGAATGCAGCCCG TCCGTGCCTTGCTGGCATGTTCTTCTCTCTTGTCTTTCTTCTTACATTCT CCACTTCTCGCTGCGTTCCCGCCTGCTGGCTGATGTGGCAGGCATCAAAG ACCTGAAGGACGACATCGGCGGAACGCTGGAGAAAATCCAGGGCCGTTTC CGCCTCGAGCTCAGCGACGCGGACGCCGATCGCCACTTCAACTCGCTCAT CGGCCAGAGCCTCAATGCCCTCGCACCGCGCGTCCTTGAGGTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig8020:627..2069-

>mRNA_P-wetherbeei_contig8020.1.4 ID=mRNA_P-wetherbeei_contig8020.1.4|Name=mRNA_P-wetherbeei_contig8020.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=909bp|location=Sequence derived from alignment at P-wetherbeei_contig8020:627..2069- (Phaeothamnion wetherbeei SAG_119_79)
CCCATTCCTTGCCCGCAATTCCTTTTGCGCTGCTACTTTCCTGTTCCCGC
CTCCTTCCCCTTTATGCCGTCCGGTCTGGTCTGCTCCCGCCTCCTCCCAC
CTTTTACCGTCCGGTGCGGTCCATTCCGGCCCCATCCCGCCGAATTCCTC
CGATCTCCCCCATTCCACTCTGCCACGTCCCGCCCGGTCCCGTCCCGCCG
GCTCCCGTCCCGCCCGGTCCCGTCCCGCCCGGTCCGGTCCCGTTCCGCAC
GGTCCCGTCCCGCGTCTGCCCAGCCGTACCGCGTTCTTGCGACGGGCCCC
ACCTCGGGGCTCGTCGAGTTCGTGGCCGAGTCGACGCCGCTATCGGCCGT
CCTGCAGCAGCACGCAGGCCTCGGCATCCTCGGCTACCTGCGGCGGCACC
GCGGCGACCCGGCGGGTCCCTTGGGCGTGTCGCGGGCGGCCATGGACACG
TACCTTCGCAGCACGGCGGGCTACTGCGTGCTGACGTACTTGCTGGGCGT
CGGGGACCGGCATCTGGATAACATCATGATGAAGACGGACGGCGCGCTCT
TCCACATCGACTTTGGCTTCATGTTCGGAAAGGACCCGAAGCTGATGCCG
CCGCCGTTTCGGCTGACGCGTGACATGGTGGACGCGATGGGCGGCCTCAG
CAGCGCCCACTACACCGTATTCCGCTCGCTCTGCGTGCGGGCGTACCTCT
GCCTTCGCCGCTCCGCGCACCAGTTCCTCAACCTTCTGTCGCTGATGGTA
GATGCCGGCATCAAAGACCTGAAGGACGACATCGGCGGAACGCTGGAGAA
AATCCAGGGCCGTTTCCGCCTCGAGCTCAGCGACGCGGACGCCGATCGCC
ACTTCAACTCGCTCATCGGCCAGAGCCTCAATGCCCTCGCACCGCGCGTC
CTTGAGGTC
back to top