mRNA_P-wetherbeei_contig8012.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: D8LR77_ECTSI (DUF1995 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR77_ECTSI) HSP 1 Score: 128 bits (321), Expect = 7.690e-35 Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 1 VLSTFRTVYYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPSGPDLEDIYDIENGLATEQSTPKFLDGIADFVRDFGRL 264
++STF+T YYLRTLPWGAVT+ HG+RY++WQ+DA G+R +++ ERP G L+DIYDI NGLA E S P+FLD +A FVRDFGRL
Sbjct: 168 IISTFQTTYYLRTLPWGAVTKEHGKRYTVWQDDADDPSGYRLLKAVSERPVGEALDDIYDIANGLADEDSAPEFLDSVAKFVRDFGRL 255
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: A0A6H5KFG6_9PHAE (DUF1995 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG6_9PHAE) HSP 1 Score: 121 bits (304), Expect = 2.430e-31 Identity = 50/88 (56.82%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 1 VLSTFRTVYYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPSGPDLEDIYDIENGLATEQSTPKFLDGIADFVRDFGRL 264
++STF+T YYLRTLPWGAVT+ +G+RY++WQ+D G+R +++ ERP+G L+DIY++ NGLA + S P+FLD +A FVRDFGRL
Sbjct: 276 IISTFQTTYYLRTLPWGAVTKEYGKRYTVWQDDPDDPSGYRLLKAVSERPAGEALDDIYNVANGLADDDSAPEFLDSVAKFVRDFGRL 363
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: A0A1Z5JNI5_FISSO (DUF1995 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNI5_FISSO) HSP 1 Score: 100 bits (249), Expect = 2.380e-23 Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 1 VLSTFRTVYYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPSGPDLEDIYDIENGLATEQSTPKFLDGIADFVRDFGRL 264
++ +T YYLRTL WGA+TR + +S+WQED A GG+R I++ + PS P++EDIYDIENG +E+S+ FLD + DFV+ RL
Sbjct: 273 LIDPLQTTYYLRTLAWGALTRQYPEAFSVWQEDEGADGGYRLIKTMDRLPSNPEVEDIYDIENGAKSERSSGGFLDQLGDFVQGMTRL 360
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: B7FUF0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUF0_PHATC) HSP 1 Score: 93.2 bits (230), Expect = 1.280e-20 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 1 VLSTFRTVYYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPSGPDLEDIYDIENGLATEQSTPKFLDGIADFVRDFGRL 264
++ + YYLRTLPWGA+TR + YS+WQED A GG+R I++ PS P++EDIYDIENG + + LD +ADFV RL
Sbjct: 273 LIDPLQNTYYLRTLPWGALTRLWPQAYSVWQEDTDAEGGYRLIKTLGRLPSNPEVEDIYDIENGNMEARQSGGPLDQLADFVNGMMRL 360
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: A0A7S2R2M6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2M6_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.700e-19 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 1
Query: 22 VYYLRTLPWGAVTRFHGRRYSIWQEDAA-AAGGFRCIRSTEERPSGPDLEDIYDIENGLATEQSTPK---FLDGIADFVRDFGRL 264
+YYLRTLPWGA+TR + ++++WQED G+R I+S + PS P++EDIYD ENG A + S K LD I DFV RL
Sbjct: 45 IYYLRTLPWGALTRLYPNQFTVWQEDTDNEETGYRMIKSMDRLPSNPEVEDIYDFENGNADDPSQQKGFGLLDAIGDFVLGMTRL 129
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: A0A7S2EEN6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EEN6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.360e-19 Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 1 VLSTFRTVYYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPSGPDLEDIYDIENGLATEQSTPK---FLDGIADFVRDFGRL 264
++ ++YYLRTL WGA+TR ++++WQED GG+R I+S + PS P++EDIYD ENGLA + + FLD + DFV +L
Sbjct: 309 LIDDLTSIYYLRTLQWGALTRIWPNQFTVWQEDEEEEGGYRMIKSLDRLPSNPEVEDIYDYENGLANDPAAGGGLGFLDALGDFVNGMTKL 399
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: A0A7S2PCV2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCV2_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 5.230e-19 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 1 VLSTFRTVYYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPSGPDLEDIYDIENGLATE-QSTPKFLDGIADFVRDFGRL 264
+L YYLRTL WGA+TR +S+WQED + GG+R I+S + PS P++EDIYDIENGL + P FL+ + DFV RL
Sbjct: 283 LLDDLAVSYYLRTLQWGALTRAWPSDFSVWQEDENSDGGYRLIKSLDNLPSNPEVEDIYDIENGLMNAPKDGPGFLNALGDFVNGMTRL 371
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: A0A7R9WRK6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRK6_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.600e-18 Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 25 YYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPSGPDLEDIYDIENGLATEQSTPKFLDGIADFVRDFGRL 264
YYLRTL WGA+TR + +S+WQED A GG++ I++ + PS P++EDIYDI NGL E FLD DFV RL
Sbjct: 311 YYLRTLQWGALTREWPKPFSVWQEDDDAPGGYKLIQNLDMLPSNPEVEDIYDIANGLRDENKNGGFLDQFGDFVNGMMRL 390
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: B8BXZ6_THAPS (DUF1995 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXZ6_THAPS) HSP 1 Score: 84.7 bits (208), Expect = 2.380e-17 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 25 YYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPSGPDLEDIYDIENGLATEQSTPK----FLDGIADFVRDFGRL 264
YYLRTLPWGA+TR + +++WQED A GG+R I++ + PS P++EDIYDIENG + + P FL+ + DFV +L
Sbjct: 333 YYLRTLPWGALTRVWPQLFTVWQEDEDADGGYRLIKAMDRLPSNPEVEDIYDIENG---DMNAPSDGFGFLNALGDFVNGMTKL 413
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Match: A0A7S2KX08_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX08_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 6.280e-17 Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 25 YYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPSGPDLEDIYDIENGLATEQSTPK----FLDGIADFVRDFGRL 264
YYLRTLPWGA+TR + +++WQEDA + G+R I++ + PS P++EDIYDIENG E S P L+ + DFV RL
Sbjct: 335 YYLRTLPWGALTRVWPQLFTVWQEDAEESTGYRLIKAMDRLPSNPEVEDIYDIENG---EMSAPGEGFGLLNALGDFVNGMTRL 415 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8012.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8012.1.1 >prot_P-wetherbeei_contig8012.1.1 ID=prot_P-wetherbeei_contig8012.1.1|Name=mRNA_P-wetherbeei_contig8012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=89bp VLSTFRTVYYLRTLPWGAVTRFHGRRYSIWQEDAAAAGGFRCIRSTEERPback to top mRNA from alignment at P-wetherbeei_contig8012:168..434+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8012.1.1 ID=mRNA_P-wetherbeei_contig8012.1.1|Name=mRNA_P-wetherbeei_contig8012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig8012:168..434+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8012:168..434+ >mRNA_P-wetherbeei_contig8012.1.1 ID=mRNA_P-wetherbeei_contig8012.1.1|Name=mRNA_P-wetherbeei_contig8012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig8012:168..434+ (Phaeothamnion wetherbeei SAG_119_79)back to top |