mRNA_P-wetherbeei_contig7979.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: A0A835Z6M8_9STRA (Cilia- and flagella-associated protein 52 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M8_9STRA) HSP 1 Score: 180 bits (456), Expect = 9.440e-51 Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = 1
Query: 7 GSPGKVTGGLHVTPCGGYIVYPLGSVVVVRALKGGYQAFLEGHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAVRSAEAGVFNAEGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
G G V GGL VTPCG Y VYPLG +++VR+L GG AFLEGH++++ CVAMS DG+ LATGQ+NH GVKADV +WD+ AVR+ ++ + GVL R RQH+G VQ LDFS DGRYLATLGGQDDN++VVWD+ G
Sbjct: 17 GFSGHVLGGLKVTPCGNYTVYPLGKMMIVRSLTGGKTAFLEGHTNDICCVAMSPDGKRLATGQVNHPGVKADVCIWDMSRAVRNCDSHDPHGAGVLLSRFRQHLGKVQCLDFSCDGRYLATLGGQDDNTLVVWDIDTG 154
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: D7FQG4_ECTSI (Cilia- and flagella-associated protein 52 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG4_ECTSI) HSP 1 Score: 171 bits (434), Expect = 2.160e-47 Identity = 81/139 (58.27%), Postives = 106/139 (76.26%), Query Frame = 1
Query: 7 GSPGKVTGGLHVTPCGGYIVYPLGSVVVVRALKG-GYQAFLEGHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAVRSAEAGVFNAEGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
G GKV GG+ +TPCGGY+VYPLGS++VVR++ G QAFLEGH+ +SCVAMS DG + +GQ NH GVKAD+ VWDL A + +A + GVL HRL+QH+G V+A+DFS+DG+Y A+LGGQDDNS+V+W+ G
Sbjct: 18 GFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDAEKPSGAGVLLHRLKQHLGHVRAVDFSFDGKYFASLGGQDDNSVVIWEAKTG 156
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: A0A6V1NYK3_HETAK (Cilia- and flagella-associated protein 52 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NYK3_HETAK) HSP 1 Score: 158 bits (400), Expect = 9.890e-43 Identity = 77/140 (55.00%), Postives = 102/140 (72.86%), Query Frame = 1
Query: 1 LAGSPGKVTGGLHVTPCGGYIVYPLGSVVVVRALKGGYQAFLEGHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAVRSAEAGVFNAEGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
+ G G+V GL PCG YIVYPLGS++V+R L+ Q+FLEGH+ V+C+A+S DG LA+GQ +H+GVKADVIVWDL A + G +A G + HRL QH+G VQA+DFS D ++L TLGG+DDN++VVW+ A G
Sbjct: 15 VIGFSGEVPDGLKYLPCGEYIVYPLGSIIVLRHLQENKQSFLEGHTQGVTCLAVSHDGTRLASGQTHHSGVKADVIVWDLEKAKENCRNGTPSAGGEVVHRLFQHLGKVQAVDFSCDDQFLLTLGGRDDNALVVWEAATG 154
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: A0A7S3H4V8_9STRA (Cilia- and flagella-associated protein 52 (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4V8_9STRA) HSP 1 Score: 142 bits (358), Expect = 5.190e-37 Identity = 72/141 (51.06%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 1 LAGSPGKVTGGLHVTPCGGYIVYPLGSVVVVRALKGGYQAFLEGHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAVRSAEAGVFNA-EGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
+ G GKV L TPCG YIVYPLGS VV++ + +AF +GH+ +SCV +S DG LA+GQ+N GVKADVI+WDL A + ++GV + +RL+QH+G VQ + FS + YLAT+GGQDDN+IVVWD +G
Sbjct: 10 VIGFNGKVNNALVYTPCGKYIVYPLGSFVVLKNMVTEKEAFFDGHTSEISCVTVSADGNRLASGQINLMGVKADVIIWDLAQAKKLLDSGVVMVGDSTCIYRLKQHLGRVQDVSFSPNNAYLATIGGQDDNTIVVWDAESG 150
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: F0Y0S5_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0S5_AURAN) HSP 1 Score: 133 bits (334), Expect = 1.700e-33 Identity = 75/149 (50.34%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 1 LAGSPGKVTGGLHVTPCGG------YIVYPLGSVVVVRALKGGYQA---FLEGHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAVRSAEAGVFNAEGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
+ G G V G+HV +I+YPLGS+VVVR G +A FL+GHS++VSC+ +S DGR LA+GQ +H GV ADVIVWDL A A AG +E VL HRLRQH G VQA+ + LATLGG+DDN++V+WD+ +G
Sbjct: 15 IIGFSGSVQDGVHVVRSEHLPGSREWIIYPLGSLVVVRQTGTGSRAVVAFLQGHSNDVSCLCVSGDGRRLASGQDSHQGVAADVIVWDLVEACEGALAGESASEKVLLHRLRQHKGSVQAVGINSTDSLLATLGGRDDNALVIWDLESG 163
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: A0A7S0D1I4_MICPS (Cilia- and flagella-associated protein 52 (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D1I4_MICPS) HSP 1 Score: 131 bits (329), Expect = 4.900e-33 Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 1
Query: 1 LAGSPGKVTGGLHVTPCGGYIVYPLGSVVVVRALKGGY-QAFLEGHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAVRSAEAGVFNAEGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
+ G GKV GGL + P G + YPLG+ +VV+ L Y Q+FL+GH+ VSC+A+SRDG FLA+GQ+ + G AD+IVWDL +A V+ HR+ H V L FS+DGRYLA+LGGQDDNS+V+WDV G
Sbjct: 12 VVGFAGKVGGGLVLHPNGKTMAYPLGATIVVKELGDTYSQSFLQGHNDEVSCLAISRDGAFLASGQITNMGFSADIIVWDL------------HARSVV-HRMSLHKVKVAELSFSHDGRYLASLGGQDDNSLVIWDVETG 139
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: A0A812YS87_9DINO (Cilia- and flagella-associated protein 52 n=5 Tax=Sar TaxID=2698737 RepID=A0A812YS87_9DINO) HSP 1 Score: 130 bits (328), Expect = 1.210e-32 Identity = 66/135 (48.89%), Postives = 94/135 (69.63%), Query Frame = 1
Query: 16 GKVTGGLHVTPCGGYIVYPLGSVVVVRALKGGYQAFLEGHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAVRSAEAGVFNAEGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
G+V GL P G +++YPLGS VVV+ L+ QAFL+GH+ V+CVA+SRDG+ +A+GQ G +A V+VWD +AVR+A + G L H+L H V+ + F+ DG +LA+LGG+DDN+IV+WD+AAG
Sbjct: 55 GRVPSGLIYHPDGEHVIYPLGSTVVVKNLRKNTQAFLQGHTDRVTCVAISRDGKRIASGQRTSMGFRAPVMVWDFDSAVRNANT--IDRTGELIHKLVLHKVMVRDVSFNCDGSFLASLGGEDDNTIVIWDLAAG 187
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: K0S6T1_THAOC (Cilia- and flagella-associated protein 52 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6T1_THAOC) HSP 1 Score: 130 bits (327), Expect = 1.510e-32 Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 7 GSPGKVTGGLHVTPCGGYIVYPLGSVVVVRALKGGYQAFLE-GHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAVRSAEAGVFNAEGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
G G + GGLH PCG ++V+PLGSV V+++L Q FL+ G NVSCVA+S DGR+LA G A KA+V+VWDL +R+ ++ + H L QH V+++DFS DGR+LATLGG DDN +VVWD G
Sbjct: 15 GFTGSICGGLHYLPCGKFVVFPLGSVAVLKSLSTKKQYFLDAGVDKNVSCVAISGDGRYLACGHETTASFKAEVLVWDLNRVLRAYAKNEELSKDCVLHTLFQHYKRVESVDFSCDGRHLATLGGLDDNDLVVWDCETG 153
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: A0A7S0VJE7_9CHLO (Cilia- and flagella-associated protein 52 n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VJE7_9CHLO) HSP 1 Score: 128 bits (321), Expect = 9.330e-32 Identity = 68/141 (48.23%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 1 LAGSPGKVTGGLHVTPCGGYIVYPLGSVVVVRALKGGY-QAFLEGHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAVRSAEAGVFNAEGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
+ G G+V GGL P G ++YPLGS +V+R Q FL+GHS VSC+A+S+ G++LA+GQ+ + G AD+I+WDL L HRL H +QALDFSYD RYLA+LGGQDDNS+V+WDV +G
Sbjct: 10 VIGFGGQVEGGLVAHPDGRTLIYPLGSTIVLRDKDDSKSQEFLQGHSDKVSCLALSKSGKYLASGQVTYMGFTADIIIWDLETKQ-------------LVHRLSLHKVKIQALDFSYDERYLASLGGQDDNSLVLWDVQSG 137
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Match: F0YDJ7_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ7_AURAN) HSP 1 Score: 125 bits (314), Expect = 8.840e-31 Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 7 GSPGKVTGGLHVTPCGG--YIVYPLGSVVVVR-ALKGGYQAFLEGHSHNVSCVAMSRDGRFLATGQMNHAGVKADVIVWDLPAAV-RSAEAGVFNAEGVLSHRLRQHMGGVQALDFSYDGRYLATLGGQDDNSIVVWDVAAG 420
G G V GGLH G +I +PLG++VVV+ A + AFL+GHS +VSCVA+S D R LA+GQ N GV+A V++WDL A R + G + H LRQH+ GVQAL FS D R LAT+GG+DDNS+V+WD G
Sbjct: 17 GFSGGVLGGLHAVSYRGEPFITFPLGAMVVVKHATRKEGVAFLQGHSRSVSCVAVSHDCRMLASGQTNQLGVEAPVMLWDLEEACERVLQGGAGHGSLGPVHVLRQHLAGVQALSFSCDDRSLATIGGRDDNSLVIWDTRTG 158 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7979.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7979.1.1 >prot_P-wetherbeei_contig7979.1.1 ID=prot_P-wetherbeei_contig7979.1.1|Name=mRNA_P-wetherbeei_contig7979.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp LAGSPGKVTGGLHVTPCGGYIVYPLGSVVVVRALKGGYQAFLEGHSHNVSback to top mRNA from alignment at P-wetherbeei_contig7979:2193..2923+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7979.1.1 ID=mRNA_P-wetherbeei_contig7979.1.1|Name=mRNA_P-wetherbeei_contig7979.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=731bp|location=Sequence derived from alignment at P-wetherbeei_contig7979:2193..2923+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7979:2193..2923+ >mRNA_P-wetherbeei_contig7979.1.1 ID=mRNA_P-wetherbeei_contig7979.1.1|Name=mRNA_P-wetherbeei_contig7979.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig7979:2193..2923+ (Phaeothamnion wetherbeei SAG_119_79)back to top |