mRNA_P-wetherbeei_contig7971.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: D8LE76_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE76_ECTSI) HSP 1 Score: 135 bits (341), Expect = 2.320e-33 Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 181 AITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLLLRLLGPLADIDRVAPTYADDEAAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALLGSEDLEDY 597
A+ QR RG + R + N V+EK++ PR AYYYYN ++ E +W+ P ++ R+LG D+D +APTY ++EAA MLQAAWR R R+ R LA KVFD TGA YY+N + + +W KPAL G+ED+EDY
Sbjct: 11 AVHAQRVVRGFLGRLAAIRQANLVYEKIFDPRTHAYYYYNTYSFETTWQPPAVVTRILGEFGDLDAIAPTYTEEEAAVMLQAAWRRRRGIRMTRALLAS-VVSKVFDESTGAHYYFNGLSGETSWSKPALFGAEDVEDY 148
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: A0A8J2SLX2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SLX2_9STRA) HSP 1 Score: 102 bits (254), Expect = 9.590e-22 Identity = 60/139 (43.17%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 175 AAAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLLLRLLGPLADIDRVAPTYADDEAAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALLGSEDLE 591
AA + +Q R + R R + V+EK++ P + YYYYN T EASW+RP LL D+ VAPT+ D++AA +Q AWR R VRR +A KV+D + YYYN QT Q +W KP LLGS+D+E
Sbjct: 12 AAVLKIQSLWRRSLVRERTYLELKAVWEKIFDPVQQIYYYYNTVTDEASWKRPAPLL-----WRDLGDVAPTFTDEQAAIYMQCAWRRLKFLRTVRRLVAS-VVSKVYDEHSQNYYYYNAQTGQTSWTKPLLLGSQDIE 144
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: A0A7S3ZML4_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZML4_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.030e-21 Identity = 60/139 (43.17%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 175 AAAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLLLRLLGPLADIDRVAPTYADDEAAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALLGSEDLE 591
AA + +Q R + R R + V+EK++ P + YYYYN T EASW+RP LL D+ VAPT+ D++AA +Q AWR R VRR +A KV+D + YYYN QT Q +W KP LLGS+D+E
Sbjct: 30 AAVLKIQSLWRRSLVRERTYLELKAVWEKIFDPVQQIYYYYNTVTDEASWKRPAPLL-----WRDLGDVAPTFTDEQAAIYMQCAWRRLKFLRTVRRLVAS-VVSKVYDEHSQNYYYYNAQTGQTSWTKPLLLGSQDIE 162
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: K3WKB7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKB7_GLOUD) HSP 1 Score: 85.1 bits (209), Expect = 4.690e-16 Identity = 55/150 (36.67%), Postives = 75/150 (50.00%), Query Frame = 1
Query: 178 AAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLL------------------LRLLGPLADIDRVAPTYADDEAAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALL 573
AA VQRA R +L L V+E++Y P +DAYYY+N TK+ +WE+P +L L L L D R + D A LQ +R R A+R + RLA + Y K D ++G YY N +TQ +WE PAL+
Sbjct: 209 AATLVQRAYRRKRGFETLLMLCRAVYERIYDPNQDAYYYHNTRTKQTTWEKPAVLRNAQADVFTPRTRQKQQQLETLAHLGDT-RKPRVWTQDTAVVCLQGLFRKRQAQRALHARLA-QVYRKALDPDSGLFYYVNVETQAVSWEPPALV 356
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: A0A6G0XKM6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKM6_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.360e-15 Identity = 56/152 (36.84%), Postives = 83/152 (54.61%), Query Frame = 1
Query: 178 AAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLL------------LRLLGPLADIDRVAPTYADDE-AAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALLGSEDLED 594
AA +Q R AR R+ ++ E ++KV+ P + ++YYN+ T + W +P LL + D+ R T E AA LQ +R RLARR +R +A + Y+KVFDAE+ +YYYN +T ++ W KP LLGS D+E+
Sbjct: 469 AASIIQGLFRKRQARRRLKQIIAETYKKVFDPETNMFFYYNEKTGMSQWAKPTLLGSDDIQAAPRPSKTAQVEMKDVFRGLSTPRRLELAATKLQGMFRSRLARRRLRDLIA-QTYQKVFDAESKMSYYYNTKTGESHWTKPMLLGSSDIEE 619
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: A0A8K1FGZ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGZ9_PYTOL) HSP 1 Score: 81.3 bits (199), Expect = 1.910e-14 Identity = 56/158 (35.44%), Postives = 83/158 (52.53%), Query Frame = 1
Query: 178 AAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLL----------------LRLLGPLADIDRVAPTYADDEAAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALL---GSEDLED 594
AA VQRA R +L L V+E++Y P + AYYY+N TKE +WE+P LL L L AD ++ + ++ AA LQ +R R A++ + RLA E Y+KV+D + YY N +T +W++PA+L G D+E+
Sbjct: 418 AARMVQRAYRRRRGFAMLLNLCRSVYERIYDPDQQAYYYHNTRTKEVTWEKPRLLRNAAADVFSPRTRQQQLSSLWKPADQNKKRVEWTEESAAIRLQGLFRARQAKQELDARLA-EAYKKVWDPSSEQFYYANLKTGAVSWDRPAILVRRGKLDVEE 574
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: A0A2R5GUZ1_9STRA (Peptidylprolyl isomerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUZ1_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.510e-14 Identity = 61/155 (39.35%), Postives = 79/155 (50.97%), Query Frame = 1
Query: 178 AAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLL------------LRLLGPLADIDRVAPTYADD----EAAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALLGSEDLED 594
AA T+Q R L AR +V TL VFE+VY A+YY N SWE P LL R A R A A D EAA +Q +R R AR ++ +A Y+K FD E G +YYN +T +++W+KPA LG+EDL+D
Sbjct: 14 AACTLQAWFRALRARVQVRTLAKTVFERVYDEGSAAWYYRNTTNGSTSWEPPLLLPGADNVLTPRARRRFAAQEAKRKRGALKRASDMTESEAARFIQNLFRTRAARNRLKMLIAT-VYQKAFD-EDGNVFYYNTRTGESSWDKPAFLGAEDLDD 166
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: A0A6U1NMK0_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A6U1NMK0_CAFRO) HSP 1 Score: 79.3 bits (194), Expect = 7.890e-14 Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 175 AAAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLLLRLLG----PLADID------RVAPTYADDEAAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALLGSEDL 588
AAA+ +Q + RG++ R RV L+ EV K++ + YYY+N + E+ WE+P RLLG P + R A ++AA+ LQ+ R R A + V+ LA + KV D E G +Y+N T + WE+P +LG EDL
Sbjct: 309 AAAVAIQASWRGVLGRARVRALLAEVLRKIWDSNYECYYYFNTASGESFWEKP----RLLGDDDVPAETAEGHVRTGRRAEDMDREQAASKLQSLVRARRATQKVKA-LARSVWAKVADEEYGTGFYFNKLTGDSQWERPVVLGDEDL 451
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: A0A5A8EH46_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EH46_CAFRO) HSP 1 Score: 79.3 bits (194), Expect = 1.020e-13 Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 175 AAAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLLLRLLG----PLADID------RVAPTYADDEAAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALLGSEDL 588
AAA+ +Q + RG++ R RV L+ EV K++ + YYY+N + E+ WE+P RLLG P + R A ++AA+ LQ+ R R A + V+ LA + KV D E G +Y+N T + WE+P +LG EDL
Sbjct: 366 AAAVAIQASWRGVLGRARVRALLAEVLRKIWDSNYECYYYFNTASGESFWEKP----RLLGDDDVPAETAEGHVRTGRRAEDMDREQAASKLQSLVRARRATQKVKA-LARSVWAKVADEEYGTGFYFNKLTGDSQWERPVVLGDEDL 508
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Match: A0A5D6XZP2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZP2_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.780e-13 Identity = 52/176 (29.55%), Postives = 86/176 (48.86%), Query Frame = 1
Query: 112 RREIDNKEVSNMDPPKTSDAAAAAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYYNKHTKEASWERPCLLLR----LLGPLADIDRV------------------APTYADDEAAAMLQAAWRGRLARRVVRRRLADECYEKVFDAETGATYYYNHQTQQATWEKPALL 573
R E D + T AA+ +QRA R +L L +V+E+++ P ++AYYY+N T+E +WE+P LL +L P + ++ + + ++ AAA LQ +R R ARR + RLA + Y +V D ++G Y+ + +T +W+ P LL
Sbjct: 399 RAEADERSAKLAVLRATITEGDAAVMLQRAYRRKRGFEALLQLCRQVYERIFDPHQNAYYYHNTRTEETTWEKPALLRNAKADVLSPRSRRQQLEAXXXXXXXXXXXSGSLRSQVWTEESAAACLQTLFRSRRARRALDARLA-QVYRRVLDTDSGCFYFVDTRTDAVSWDAPTLL 573 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7971.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7971.1.1 >prot_P-wetherbeei_contig7971.1.1 ID=prot_P-wetherbeei_contig7971.1.1|Name=mRNA_P-wetherbeei_contig7971.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp MDPPKTSDAAAAAITVQRAARGLMARTRVLTLVNEVFEKVYAPREDAYYYback to top mRNA from alignment at P-wetherbeei_contig7971:1526..2612+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7971.1.1 ID=mRNA_P-wetherbeei_contig7971.1.1|Name=mRNA_P-wetherbeei_contig7971.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1087bp|location=Sequence derived from alignment at P-wetherbeei_contig7971:1526..2612+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7971:1526..2612+ >mRNA_P-wetherbeei_contig7971.1.1 ID=mRNA_P-wetherbeei_contig7971.1.1|Name=mRNA_P-wetherbeei_contig7971.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig7971:1526..2612+ (Phaeothamnion wetherbeei SAG_119_79)back to top |