mRNA_P-wetherbeei_contig7970.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: A0A6H5LM28_9PHAE (tRNA_edit domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM28_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.370e-50 Identity = 99/212 (46.70%), Postives = 126/212 (59.43%), Query Frame = 1
Query: 1 QRMKVLEERVAVLEFVLGGNKA-VDDAVERCKHAC--SGLISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIMENFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLPLSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAALRPVAVADFTEPRVG 627
Q ++++ R +E L G + D +ER K C +G S R+KWV YY+ L ER+ LG P LCKT+IMEN + D DP RFYLVVVQY AR+ + K+ AV + +R R + +LQ APEEVGL LSGFPHNGV+ FG IPV+L+ AV L P ++W+GAGHP LKL VS D V L VAD + PR G
Sbjct: 13 QTLQLIARRAVAIERRLRGEPPDLTDPIERVKEHCHRAGATSVRYKWVPHGYYDTPLEERAKELGSEPEQLCKTMIMEN---KAFDENDPTMERFYLVVVQYAARLSSQKISAAVMRMM---KRSSRGRCNLQVAPEEVGLSLSGFPHNGVTVFGGLTPIPVILSEAVLALRPSFVWLGAGHPLLKLGVSTEDLVKKLG-ATVADISVPRDG 217
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: A0A484EHU1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHU1_BRELC) HSP 1 Score: 166 bits (420), Expect = 3.960e-48 Identity = 82/176 (46.59%), Postives = 112/176 (63.64%), Query Frame = 1
Query: 109 LISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIMENFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLPLSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAALRPVAVADFTEPRVGVDV 636
L SA K V S YY SLA+R+ +LGC HLCKT+IMEN C N DPL+SR+Y VV+QY +++ + +L + V PE +RP + K + Q APE+V L+GF HNGVS FG K +PV+++ A+ DL P +IW+G G +KLR+SV D V AL+ T R G+D+
Sbjct: 43 LSSAALKTVPSDYYSWSLAQRASVLGCKIPHLCKTIIMENIACINSGNEDPLNSRYYCVVLQYNSKLDSEQLRRFVRDSIPEADRPAKKKFNFQHAPEKVSEELTGFQHNGVSTFGTKTRVPVIVSGAIADLKPSFIWLGGGAELIKLRISVQDLVQALKARVAVGITALRTGLDL 218
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: D0NP05_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NP05_PHYIT) HSP 1 Score: 155 bits (391), Expect = 8.020e-44 Identity = 85/207 (41.06%), Postives = 115/207 (55.56%), Query Frame = 1
Query: 4 RMKVLEERVAVLEFVLGGNKAVDDAVERCKHACSGLISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIMENFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLPLSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAALRPVAVADFTEPRV 624
R +ER+ LE L + V+ E K L SA K S YY +L +R+ LLGC HLCK++I+EN C N DPL+SR+Y V +QY +++ +L + V PE +RP + K + Q AP EV L+GF HNGVS FG K IPV++A A+ +L P +W+G G +KLR+SV D V AL T RV
Sbjct: 10 RFATAQERLDALEKSLDDLEGVERVKEHLKR--ENLTSAALKTAPSDYYAWTLTKRAKLLGCEIPHLCKSIIVENVACVNSGVEDPLNSRYYCVALQYNSKLDAEQLRRFVRDNIPEADRPSKKKFNFQHAPGEVSEELTGFGHNGVSAFGMKTPIPVIVAGAIAELRPPCLWLGGGAESVKLRISVQDLVKALGARVADGITSLRV 214
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: A0A3F2RP97_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RP97_9STRA) HSP 1 Score: 155 bits (391), Expect = 9.820e-44 Identity = 85/210 (40.48%), Postives = 116/210 (55.24%), Query Frame = 1
Query: 4 RMKVLEERVAVLEFVLGGNKAVDDAVERCKHACSGLISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIMENFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLPLSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAALRPVAVADFTEPRVGVD 633
R+ + R+A LE +G + V+ + K L SA K YY +LA+R LLGC HLCK++I+EN C N D L+SR+Y VV+QY +R+ +L + V PE +RP R K + Q AP E+ L+GF HNGVS FG K IPV++A V L P ++W+G G +KLR+SV D V AL T R +D
Sbjct: 14 RVAAAQTRLAALERSMGDLEGVNRVKQHLKR--EKLASASLKTAPDDYYTWTLAQRGELLGCQIPHLCKSIIVENVACTNSGLEDSLNSRYYCVVLQYNSRLDAEQLRRFVRDSIPEEDRPSRKKFNFQHAPGEMSEELTGFGHNGVSTFGMKKPIPVIVAGDVAKLKPAFLWLGGGAETVKLRISVQDLVKALGAPIAEGITTVRTDID 221
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: A0A836CLD2_9STRA (YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD2_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.040e-43 Identity = 90/209 (43.06%), Postives = 127/209 (60.77%), Query Frame = 1
Query: 1 QRMKVLEERVA-VLEFVLGGNKAVDDAVERCKHACSGLISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIME-NFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLPLSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAALRPVAVADFTEPR 621
QR++ LE RVA +L G A+ D VER K +SARFKWV +YY+ SL ER+ +L C P L K+L+ + N G + D + + +V+VQY A+I L++ L R + ++S AP+E GL L+GFPHNGVSPFG+ +P+VL++A+ +L +++WMG GH DLK+ VSV D V AL VAD +EPR
Sbjct: 16 QRLQDLEARVATILRAQQGDKAALTDPVERVKAEAQKCLSARFKWVEPTYYDKSLEERATILRCHPRQLTKSLLFKGNAGSEAADSSGAAPV-YMMVIVQYLAKINLKLLQEVGNALL--AGRQGQKRLSFALAPDEEGLALTGFPHNGVSPFGSLCRVPMVLSSAIAELPEQFLWMGGGHTDLKIGVSVQDLVRALN-AHVADVSEPR 220
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: A0A225UIC1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225UIC1_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.300e-43 Identity = 85/195 (43.59%), Postives = 116/195 (59.49%), Query Frame = 1
Query: 1 QRMKVLEERVAVLEFVLGGNKAVDDAVERCKHACSGLISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIMENFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLPLSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAAL 585
+R+ LE + LE G K V ++R K L SA K S YY +LA+R+ LLGC HLCK++I+EN C N DPL+SR+Y VV+QY A++ L + V PE +RP + K + Q AP +V L+GF HNGVS FG K IPV++A A+ +L P ++W+G G +KLR+SV D V AL
Sbjct: 16 KRLDALERSLDDLE----GVKRVKSHLQREK-----LASAALKSAPSDYYTWTLAQRAKLLGCAVPHLCKSIIVENVACINSGVEDPLNSRYYCVVLQYNAKLDAELLRRFVRDNIPEKDRPAKKKFNFQHAPGDVSEELTGFGHNGVSTFGMKTPIPVIVAGAIAELKPSFLWLGGGAESVKLRISVQDLVKAL 201
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: G5ACJ2_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5ACJ2_PHYSP) HSP 1 Score: 153 bits (387), Expect = 3.600e-43 Identity = 84/195 (43.08%), Postives = 115/195 (58.97%), Query Frame = 1
Query: 1 QRMKVLEERVAVLEFVLGGNKAVDDAVERCKHACSGLISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIMENFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLPLSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAAL 585
+R++ LE + LE G + V ++R K L SA K YY+ +LA+R LLGC HLCK++I+EN C N DPL+SR+Y VV+QY +++ +L + V PE +RP R K + Q AP EV L+GF HNGVS FG K IPV++A V L P ++W+G G +KLR+SV D V AL
Sbjct: 16 KRLEALERSLDDLE----GVRRVKQHLQREK-----LASAALKTAPGDYYQWTLAQRGELLGCATPHLCKSIIVENVACTNSGVEDPLNSRYYCVVLQYNSKLDAEQLRRFVRDSIPESDRPSRKKFNFQHAPGEVSEQLTGFGHNGVSTFGMKTPIPVIVAGDVAALKPAFLWLGGGAETVKLRISVQDLVKAL 201
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: A0A662YGU5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGU5_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.920e-43 Identity = 84/196 (42.86%), Postives = 117/196 (59.69%), Query Frame = 1
Query: 4 RMKVLEERVAVLEFVLGGNKAVDDAVERCKHACSGLISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIMENFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLP--LSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAAL 585
R+ + R+ LE + ++V E + L SA K + YY +LA+R+ LLGC HLCK++I+EN C + DPL+SR+Y VV+QY +R+ +L + V PE +RP R K + Q AP EVG+ L+GF HNGVSPFG A IPV++A V L P ++W+G G +KLR+SV D VAAL
Sbjct: 14 RVASAKTRLVALERAVDERESVQRVKEHLRR--EKLTSAFLKTAPADYYSWTLAQRASLLGCQIPHLCKSIIVENVACADSGIEDPLNSRYYCVVLQYNSRLDAEQLRRFVRDSIPEADRPSRKKFNFQHAPGEVGVSEKLTGFGHNGVSPFGMAAPIPVIVAGDVAALNPPFLWLGGGAETVKLRISVQDIVAAL 207
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: H3GY63_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GY63_PHYRM) HSP 1 Score: 152 bits (385), Expect = 7.200e-43 Identity = 88/213 (41.31%), Postives = 119/213 (55.87%), Query Frame = 1
Query: 4 RMKVLEERVAVLEFVLG---GNKAVDDAVERCKHACSGLISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIMENFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLPLSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAALRPVAVADFTEPRVGVD 633
R+ ++R+ LE L G K V ++R K L SA K S Y +LA+R+ LLGC HLCK++++EN C N DPL+SR+Y VV+QY +++ +L + V PE +RP R K + Q AP EV L+GF HNGVS FG K IPVV+A V L P ++W+G G +KLR+SV D V AL T R +D
Sbjct: 10 RLSAAQKRLTALERTLDDLEGVKRVKQHLQREK-----LSSAALKTAPSDYNAWTLAQRAKLLGCAIPHLCKSIVVENVACTNSGVEDPLNSRYYCVVLQYNSKLDAEQLRRFVRDNIPEVDRPSRKKFNFQHAPGEVSEELTGFGHNGVSTFGMKTRIPVVVAGDVAALKPSFLWLGGGAESVKLRISVQDLVKALGARVADGITTLRTDLD 217
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Match: A0A8J5J4C6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J4C6_9STRA) HSP 1 Score: 157 bits (398), Expect = 7.230e-43 Identity = 84/198 (42.42%), Postives = 120/198 (60.61%), Query Frame = 1
Query: 4 RMKVLEERVAVLEFVLG---GNKAVDDAVERCKHACSGLISARFKWVASSYYELSLAERSVLLGCTPGHLCKTLIMENFGCQNLDCADPLDSRFYLVVVQYEARIVTSKLEKAVYLLKPEGERPPRNKISLQAAPEEVGLPLSGFPHNGVSPFGAKAAIPVVLAAAVFDLAPRYIWMGAGHPDLKLRVSVADFVAALR 588
R+ ++R+ LE L G K V ++R K L+SA K S YY +LA+R+ LLGC HLCK++I+EN C N DPL+SR+Y VV+QY +++ +L + V PEG+RP + K + Q AP EV L+GF HNGVS FG K +IPV++A A+ +L P ++W+G G +KLR+SV D + R
Sbjct: 10 RLAAAQKRLDALERSLDDLEGVKRVKKHLQREK-----LVSAALKTAPSDYYAWTLAQRAKLLGCEVPHLCKSIIVENVACVNSGIEDPLNSRYYCVVLQYNSKLDAEQLRRFVRDSIPEGDRPSKKKFNFQHAPGEVSEELTGFGHNGVSTFGMKTSIPVIVAGAITELRPSFLWLGGGAESVKLRISVQDLLLVSR 202 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7970.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7970.2.1 >prot_P-wetherbeei_contig7970.2.1 ID=prot_P-wetherbeei_contig7970.2.1|Name=mRNA_P-wetherbeei_contig7970.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp MKVLEERVAVLEFVLGGNKAVDDAVERCKHACSGLISARFKWVASSYYELback to top mRNA from alignment at P-wetherbeei_contig7970:1365..2857+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7970.2.1 ID=mRNA_P-wetherbeei_contig7970.2.1|Name=mRNA_P-wetherbeei_contig7970.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1493bp|location=Sequence derived from alignment at P-wetherbeei_contig7970:1365..2857+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7970:1365..2857+ >mRNA_P-wetherbeei_contig7970.2.1 ID=mRNA_P-wetherbeei_contig7970.2.1|Name=mRNA_P-wetherbeei_contig7970.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig7970:1365..2857+ (Phaeothamnion wetherbeei SAG_119_79)back to top |