mRNA_P-wetherbeei_contig7953.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: D7FT45_ECTSI (Spermidine/spermine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT45_ECTSI) HSP 1 Score: 206 bits (524), Expect = 6.260e-64 Identity = 98/131 (74.81%), Postives = 115/131 (87.79%), Query Frame = 1
Query: 70 SSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
S FQ +QVVET FGKTLVLDG+TQSA DE++YHETLVHPAML HP+PK V+IGGGGELATAREVLRH+SV++ VM D+DK VVDTSR++LPEWG G +DPRLEL+Y+DAHAFLRES D +D+IIMDIA
Sbjct: 6 SDFQHVQVVETAPFGKTLVLDGKTQSAQLDEFIYHETLVHPAMLAHPNPKRVYIGGGGELATAREVLRHKSVEKCVMVDLDKLVVDTSRDVLPEWGAGVLDDPRLELHYTDAHAFLRESEDMYDVIIMDIA 136
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: A0A7S2V6Z8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Z8_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.110e-62 Identity = 99/152 (65.13%), Postives = 121/152 (79.61%), Query Frame = 1
Query: 7 EDMTPSLLTQMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
E++T + M+L+ I LD +S FQR+Q++ET +FG TLVLDG+TQSA DE++YHE LVHPAML HP+PK V+IGGGGELATARE LRH+SV+RVVMCD+DK VVD S E LPEW GC DPRLEL Y DAHA+L + + FD+IIMDIA
Sbjct: 9 EEVTVNHAMSMRLQKIILDQQSEFQRVQIIETNEFGTTLVLDGKTQSALRDEFIYHECLVHPAMLLHPNPKKVYIGGGGELATAREALRHKSVERVVMCDLDKMVVDVSMEHLPEWNAGCHLDPRLELAYGDAHAWLLNNDEQFDVIIMDIA 160
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: A0A2R5GUG4_9STRA (Spermidine synthase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUG4_9STRA) HSP 1 Score: 201 bits (510), Expect = 4.660e-61 Identity = 96/143 (67.13%), Postives = 117/143 (81.82%), Query Frame = 1
Query: 34 QMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
Q++L+ + + +S FQ +QV+ET FGKTLVLDG+TQSA FDE++YHETLVHPAML HP PK V+IGGGGELATAREVLRH V+RVVM D+D+KVV+ +E LPEW GCTEDPRLE+ Y DAHA+L+ TFD+IIMDIA
Sbjct: 48 QLRLQRVVYEGQSEFQHVQVIETTQFGKTLVLDGKTQSALFDEFMYHETLVHPAMLLHPCPKTVYIGGGGELATAREVLRHPCVERVVMVDLDQKVVELCKEHLPEWNDGCTEDPRLEVIYDDAHAYLQRHEGTFDVIIMDIA 190
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: A0A0P1AJP4_PLAHL (Spermidine synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJP4_PLAHL) HSP 1 Score: 198 bits (504), Expect = 3.160e-60 Identity = 97/152 (63.82%), Postives = 120/152 (78.95%), Query Frame = 1
Query: 7 EDMTPSLLTQMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
E MT LL + LKTI+ + KS FQ +Q++ET FGKTLVLDG+TQSA DE +YHETLVHPAML H +PK VFIGGGGE ATAREVL+H+SV++VVM DID+ V + R+ +PEW G EDPRLE++Y+DAHAFL++ TFD+IIMDIA
Sbjct: 27 EVMTEDLLLSIALKTITFEAKSKFQSMQIIETYSFGKTLVLDGKTQSAKLDEAIYHETLVHPAMLAHKNPKTVFIGGGGEFATAREVLKHKSVEKVVMVDIDELVCNMCRKEMPEWADGAFEDPRLEVHYTDAHAFLKQYNGTFDVIIMDIA 178
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: A0A8K1CQB7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQB7_PYTOL) HSP 1 Score: 196 bits (499), Expect = 1.000e-59 Identity = 94/152 (61.84%), Postives = 119/152 (78.29%), Query Frame = 1
Query: 7 EDMTPSLLTQMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
E +T L LK ++ + S+FQ +Q++ET FGKTLVLDG+TQSAA DE VYHE+LVHPA++ HP+PK V+IGGGGE ATAREVL+H SV++VVM DID+ V D R+ LPEW GC EDPRLE++Y+DAHAFL++ TFD+IIMDIA
Sbjct: 17 ESLTEDLYMSTTLKRVTFEAASTFQTMQIIETTSFGKTLVLDGKTQSAASDEAVYHESLVHPALIAHPNPKTVYIGGGGEFATAREVLKHPSVEKVVMVDIDEMVCDLCRKELPEWSDGCFEDPRLEVHYTDAHAFLKQYEGTFDVIIMDIA 168
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: A0A6A4DP37_9STRA (PABS domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DP37_9STRA) HSP 1 Score: 195 bits (496), Expect = 4.180e-59 Identity = 94/152 (61.84%), Postives = 119/152 (78.29%), Query Frame = 1
Query: 7 EDMTPSLLTQMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
E +T L LKT++ + KS FQ +Q++ET FGKTLVLDG+TQSA DE +YHETLVHPA+L HP+PK V+IGGGGE ATAREVL+H+SV++VVM DID+ V + R+ LPEW G EDPRLE++Y+DAHAFL++ TFD+IIMDIA
Sbjct: 29 EALTEDLYLSAALKTVTFEAKSKFQTMQIIETHSFGKTLVLDGKTQSAKNDEAIYHETLVHPALLAHPNPKTVYIGGGGEFATAREVLKHKSVEKVVMVDIDELVCNMCRKELPEWNDGAFEDPRLEVHYTDAHAFLKQYDGTFDVIIMDIA 180
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: A0A484DTM6_BRELC (PABS domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTM6_BRELC) HSP 1 Score: 195 bits (495), Expect = 5.160e-59 Identity = 94/152 (61.84%), Postives = 119/152 (78.29%), Query Frame = 1
Query: 7 EDMTPSLLTQMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
E MT L + LKTI+ + KSSFQ +Q++ET FGK LVLDG+TQSA DE +YHE LVHPA+L HP+PK V+IGGGGE ATAREVL+H+SV++VVM DID+ V + R+ +PEW G EDPRLE++Y+DAHAFL++ TFD+IIMDIA
Sbjct: 24 EAMTEDLYMAVALKTITFEAKSSFQAMQIIETNSFGKMLVLDGKTQSARSDEAIYHEALVHPALLNHPNPKTVYIGGGGEFATAREVLKHKSVEKVVMVDIDELVCNMCRKEMPEWSAGAFEDPRLEVHYTDAHAFLKQYEGTFDVIIMDIA 175
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: M4BQE8_HYAAE (PABS domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQE8_HYAAE) HSP 1 Score: 194 bits (494), Expect = 8.140e-59 Identity = 93/152 (61.18%), Postives = 119/152 (78.29%), Query Frame = 1
Query: 7 EDMTPSLLTQMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
E +T L + LKTI+ + KS FQ +Q++ET FGKTLVLDG+TQS DE +YHETLVHPA+L HP+PK V+IGGGGE ATAREVL+H+SV++VVM DID+ V + R+ +PEW G EDPRLE++Y+DAHAFL++ TFD+IIMDIA
Sbjct: 27 EALTEDLYLSVALKTITFEAKSKFQTMQIIETHSFGKTLVLDGKTQSTKSDEAIYHETLVHPALLAHPNPKTVYIGGGGEFATAREVLKHKSVEKVVMVDIDELVCNMCRKEMPEWADGAFEDPRLEVHYTDAHAFLKQYDGTFDVIIMDIA 178
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: F0WPF1_9STRA (Spermine synthase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WPF1_9STRA) HSP 1 Score: 194 bits (493), Expect = 9.240e-59 Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 1
Query: 7 EDMTPSLLTQMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
E +TP L LK + + KS FQ +Q++ET FGKTLVLDG+TQSA DE +YHETLVHPA+L HP+PK V+IGGGGE ATAREVL+H+SV++VVM DID+ V D R+ LPEW G EDPR E+ Y+DAHAFL++ TFD+IIMDIA
Sbjct: 21 EGLTPELYISAALKRTTFEAKSDFQTMQIIETHSFGKTLVLDGKTQSAQSDEMIYHETLVHPALLCHPNPKTVYIGGGGEFATAREVLKHKSVEKVVMVDIDELVCDMCRKELPEWNDGAYEDPRTEVYYADAHAFLKQYDGTFDVIIMDIA 172
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Match: A0A7S1CPT3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPT3_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.630e-58 Identity = 95/153 (62.09%), Postives = 115/153 (75.16%), Query Frame = 1
Query: 4 TEDMTPSLLTQMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAAFDEWVYHETLVHPAMLQHPDPKVVFIGGGGELATAREVLRHRSVQRVVMCDIDKKVVDTSRELLPEWGKGCTEDPRLELNYSDAHAFLRESLDTFDLIIMDIA 462
TED+TP L T+ L+ I D KS FQR+Q++ET FGKTLVLDG+TQSA DE+VYHE+LVHPAML H +PK VF+GGGGE AT RE+LRH SV++ VM DIDK V D RE +PEW GC +DPRLE+ Y DA A++ FD+IIMDIA
Sbjct: 17 TEDVTPDLATRASLQRILFDAKSEFQRVQIIETGPFGKTLVLDGKTQSALADEYVYHESLVHPAMLAHANPKSVFVGGGGEFATTREILRHPSVEKCVMVDIDKVVCDICREHMPEWHDGCVDDPRLEVYYEDAKAWIEGYDGKFDVIIMDIA 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7953.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7953.1.1 >prot_P-wetherbeei_contig7953.1.1 ID=prot_P-wetherbeei_contig7953.1.1|Name=mRNA_P-wetherbeei_contig7953.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp MTEDMTPSLLTQMKLKTISLDTKSSFQRIQVVETEDFGKTLVLDGRTQSAback to top mRNA from alignment at P-wetherbeei_contig7953:206..1327+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7953.1.1 ID=mRNA_P-wetherbeei_contig7953.1.1|Name=mRNA_P-wetherbeei_contig7953.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1122bp|location=Sequence derived from alignment at P-wetherbeei_contig7953:206..1327+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7953:206..1327+ >mRNA_P-wetherbeei_contig7953.1.1 ID=mRNA_P-wetherbeei_contig7953.1.1|Name=mRNA_P-wetherbeei_contig7953.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig7953:206..1327+ (Phaeothamnion wetherbeei SAG_119_79)back to top |