mRNA_P-wetherbeei_contig7940.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A6H5JGM0_9PHAE (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGM0_9PHAE) HSP 1 Score: 245 bits (626), Expect = 2.940e-69 Identity = 147/391 (37.60%), Postives = 216/391 (55.24%), Query Frame = 1
Query: 10 VRSAMEFFWNRSRAEQCQPPQPGSAHGRVPYSVLSVKGEQKAPEPPLGRTVVVDVDGATVRPGQGAIGAATAGT-----AARVASLVGERMTLKMNGRVKPHWDAVVVHSGWLLKQGGSSMQKWLWRFCVLYSTAQGHFLSYYVDIPETPLYSETGSHAERGTLDMSRIAFIRPVSA-----AKDTPPNAFDLVLLDKEWTLCADSPKAMLLWMQVLARAAESDVAVMPDDETVFRVA---LASGGEEGPGGAIYTVTGEALVKISSMGVSIQ---------QLNGI-------NSGSGMGDDGEVFYPYTDFFKWVLVDLRDGMHGLLLKCFLDDSFEARV-----------------ERLIVHAHAADIAAHIEYHIEKFMAFMHLRYE 1044
R++ME+FWN RAE PP+ GS HGR S+++++GE +AP P GR VD+DG VR GQ +A G + R V ++ TL+ NG +P W+ VVVH GWL K+GG ++++W+WR+ VLY T QGHFL+YY D+ E PLY E + ER +D+ ++ F+RP A + P NAF +V ++WTL A+S A+L W+++++ A + DVAV+ D E +F V + GG+ GP A V + SMG+ ++ L + S S D F+ +TDF+KW +V L+DG L L+CF+DD F+ R + L+V +A +A IE+ +EKFM+ MHLR E
Sbjct: 415 ARNSMEYFWNARRAELRLPPKAGSTHGRCVASMVTLRGEVQAPAVPTGRVDPVDLDGVEVRVGQVVQPSAKRGQLNLLPSPRALLGVEKKRTLRYNGGARPQWERVVVHQGWLRKRGGGAIKRWIWRYFVLYDTPQGHFLAYYNDVSEVPLYDE--ARRERQLVDLCKVCFLRPEIGRQKLPAVELPANAFTVVTTQRQWTLAAESRTAVLEWLRMISVAVDEDVAVVDDGEIMFEVKAHWVRQGGQYGPENA-------GTVHLGSMGMELRFGFSEAAATSLAALATHPKKRGSSSASYADNVRFWSFTDFYKWTIVLLQDGTRALALQCFIDDQFKEREVGEWVDFCQIVVLVMDGDMLLVTPNAKRLALAIEHQVEKFMSLMHLRLE 796
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A482S2P2_9ARCH (PH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2P2_9ARCH) HSP 1 Score: 240 bits (613), Expect = 1.790e-68 Identity = 149/361 (41.27%), Postives = 202/361 (55.96%), Query Frame = 1
Query: 1 ILQVRSAMEFFWNRSRAEQCQPP--QPGSAHGRVPYSVLSVKGEQKAPEPPLGRTVVVDVDGATVRPGQGAIGAATAGTAARVASLVGERMTLKM-NGRVKPHWDAVVVHSGWLLKQGGSSM---QKWLWRFCVLYSTAQGHFLSYYVDIPETPLYSETGSHAERGTLDMSRIAFIRPVSAAKD---TPPNAFDLVLLDKEWTLCADSPKAMLLWMQVLARAAESDVAVMPDDETVFRVALASGGEEGPGGAIYTVTGEALVKISSMGVSIQQLNGINSGSGMGDDGEVFYPYTDFFKWVLVDLRDGMHGLLLKCFLDDSFEARVERLIVHAHAADIAAHIEYHIEKFMAFMHLRYETHSG 1056
I V+ E+FWN Q + GS HGR S ++ GE PEPP+G +VD DG VR G G + A AA V S E ++ M N VK HW VV+H GWLLKQGG + + W+ R+ VLY T+QGHFL YY D E P+Y+ +H R +D+++ FIRP S D TPP FD+V ++EWTLCA+S + + W+Q+L RA + DVA++PD+E VF+V + YT +K+S+ GVS+ + NS G GD F+ YTDF+KW +++ DG + LL+ F D SF R E + A +A IEY IEKFM+ MH+R ET G
Sbjct: 215 IRDVKHTFEYFWNTYHTSQGNQSAIKLGSTHGRPIVSAHTLSGEVPPPEPPVGHVDIVDQDGLVVRAG-GKMAPRRASLAAGVVSTSKEPKSVPMENKAVKKHWHNVVMHQGWLLKQGGVGVGTNKSWIKRYFVLYKTSQGHFLVYYSDFTECPMYTAEKNH--RNIVDLAKATFIRPGSNKSDNPDTPPYCFDIVTTEREWTLCAESQENVQRWLQILTRAVDEDVAILPDEELVFKVKPKLDPLQALPATDYTTA----LKVSANGVSVT-IPDPNSKDG-GDREMYFWVYTDFYKWSIMN-PDGKYALLVNVFADSSFSRRYEYIFRTKDAQRLATAIEYFIEKFMSVMHIRLETQEG 565
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A7S3HC11_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC11_9STRA) HSP 1 Score: 221 bits (563), Expect = 4.050e-61 Identity = 140/365 (38.36%), Postives = 200/365 (54.79%), Query Frame = 1
Query: 1 ILQVRSAMEFFWNRSRAEQCQPPQP--GSAHGRVPYSVLSVKGEQKAPEPPL------GRTVVVDVDGATVRPGQGAIGAATAGTAARVASLVGERMTLKMNGRVKPHWDAVVVHSGWLLKQGG---SSMQKWLWRFCVLYSTAQGHFLSYYVDIPETPLYSETGSHAERGTLDMSRIAFIRPVSAAKD---TPPNAFDLVLLDKEWTLCADSPKAMLLWMQVLARAAESDVAVMPDDETVFRVALASGGEEGPGGAIYTVTGEALVKISSMGVSIQQLNGINSGSGMGDDGEV---FYPYTDFFKWVLVDLRDGMHGLLLKCFLDDSFEARVERLIVHAHAADIAAHIEYHIEKFMAFMHLRYE 1044
+ V+ EFFWN+ R + Q Q GS HGR SV ++ G+ PP G + VVD DG VRPG G I A + ++ N VKPHW VV+H GWLLKQGG +++ W+ R+ VLY T+QGHFL YY D E P+Y+ +H R +DM++ FIRP S +D TPP+ FD+V ++EWTLCA+S W+++L +A + DVA++PD+E VF+V + P G + + +K+S+ G+S+ G D EV F+ YTDF+KW L+ + G LL+ F D +F R+E + + A +A IE+ IEKFM +MH+R E
Sbjct: 302 VRDVKHTFEFFWNKYRVGRGQSDQVKLGSTHGRPIVSVSTLSGDL----PPSNEHQVQGSSEVVDQDGLIVRPG-GRIAPRRASINTGMMQTKEPKVVPPENREVKPHWHKVVLHQGWLLKQGGVGVGTIKSWIKRYFVLYKTSQGHFLVYYSDFTECPMYTAEKNH--RNFVDMAKCTFIRPGSNKQDNPDTPPHCFDIVTTEREWTLCAESQDNAQRWLKLLTKAVDEDVAILPDEELVFKVKP----KVDPLGVLPSTDYSTSLKVSAHGISVT-----TPSPNKGVDQEVEHYFWVYTDFYKWTLLS-QAGKLALLVNVFADATFNRRIEYIFRNKDALRLATAIEFFIEKFMCWMHIRLE 649
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A7S3JW23_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW23_9STRA) HSP 1 Score: 216 bits (551), Expect = 2.250e-59 Identity = 136/360 (37.78%), Postives = 195/360 (54.17%), Query Frame = 1
Query: 1 ILQVRSAMEFFWNRSRAEQCQPPQPGSAHGRVPYSVLSVKGEQKAPEPPLGRTVVVDVDGATVRPGQGAIGAATA----GTAARVASLVG------ERMTLKMNGRVKPHWDAVVVHSGWLLKQGGSSMQKWLWRFCVLYSTAQGHFLSYYVDIPETPLYSETGSHAERGTLDMSRIAFIRPVSAAKDTPPNAFDLVLLDKEWTLCADSPKAMLLWMQVLARAAESDVAVMPDDETVFRVALASGGEEGPGGAIYTVTGEALVKISSMGVSIQQLNGINSGSGMGDDGEVFYPYTDFFKWVLVDLRDGMHGLLLKCFLDDSFEA--RVERLIVHAHAADIAAHIEYHIEKFMAFMHLRYE 1044
+LQ A+E FWNR + ++ P P S HGR + ++ GE AP P+G VVD + VR G+ A T+ G A R ++ VG + M ++ R +WD++V H GWLLK+GG S + W+ R+ VLYSTA GHFL YY D ++PL+ ER +D+S+ FIRP S K+ P N+FD+ +++EWTL A+S +M W+QV+ RA + DVA++PDDE +F V P + +K+S+ GVS+ ++ S + F+ YTDFFKW ++ G GL + F F R E L A +A IE++IEKFMA MHL E
Sbjct: 323 VLQAGCAVEHFWNRRQLKKGLPFMPKSTHGRTIIKINTLTGEIPAPPAPIGCLDVVDENNVLVRQGKLASARRTSINLSGNAKRKSTFVGTYVKGKKAMDFQIKPRTDKYWDSIVKHQGWLLKKGGVS-KNWIKRYAVLYSTAMGHFLCYYSDFVKSPLFHT--EERERRVIDLSKTTFIRPRSNNKEAPTNSFDICTIEREWTLSAESAASMQQWLQVITRAIDEDVAIVPDDELIFLVKP----RVDPSNKLLKNEYSTALKVSASGVSV-----CHAASNDELQEKFFWCYTDFFKWSILH-HSGKTGLQVSVFTSTDFNVKDRQEYLFRTRDAVKLATAIEFYIEKFMAAMHLYLE 669
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A7S2RWY5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWY5_9STRA) HSP 1 Score: 209 bits (533), Expect = 4.600e-57 Identity = 134/355 (37.75%), Postives = 201/355 (56.62%), Query Frame = 1
Query: 1 ILQVRSAMEFFWNRSRAEQCQPPQPGSAHGRVPYSVLSVKGEQKAPEPPLGRTVVVDVDGATV--RPGQGAIGAATAGTAARVASLVGERM---TLKMNGRVKPHWDAVVVHSGWLLKQGGSSMQKWLWRFCVLYSTAQGHFLSYYVDIPETPLYSETGSHAERGTLDMSRIAFIRPVSAAKDTPPNAFDLVLLDKEWTLCADSPKAMLLWMQVLARAAESDVAVMPDDETVFRV-ALASGGEEGPGGAIYTVTGEALVKISSMGVSIQQLNGINSGSGMGDDGEVFY-PYTDFFKWVLVDLRDGMHGLLLKCFLDDSFEARVERLIVHAHAADIAAHIEYHIEKFMAFMHLRYE 1044
I+ +R + EFF NR R + P +PG+ HGR ++ GE A EP G T V+D D + RP Q R S+ G +L +VK HW VV H+GWLLK+GG++ + WL R+ VL+ T QGHFLSYY + ++PLY+ + +R +D+S+I ++R S +D PP +FD+ +++EWTLCA+S + + LW+Q+LA A + DVA++PDD F V A A + G TV ++ISS GVS+Q++ G + EVF+ YTDF+KW ++ + G L ++ F F+ + + + + IA IEY+IEKFM+ MH+R E
Sbjct: 319 IMHLRVSFEFFLNRFRHGKGLPAEPGTTHGRSVVGTHTLMGEVPAAEPATGVTEVLDEDNQPIHGRPAQ------------RKKSIFGXXXXXPSLIPLQQVKGHWSKVVNHNGWLLKKGGAT-KTWLKRYFVLFETCQGHFLSYYAEFWDSPLYNM--NRKQRNMIDLSKIVYLRAKSKHRDVPPFSFDIATIEREWTLCAESSEQLQLWLQLLASAVDEDVAIVPDDTLSFAVKARADPTDRLERGDYSTV-----LQISSWGVSVQKVKG-------SEREEVFFWCYTDFYKWSILK-QHGKMALSVQIFTTGDFKTKEDFIFRSTESQAIATAIEYYIEKFMSRMHIRRE 645
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A4D9CW09_9STRA (PH domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW09_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.360e-31 Identity = 87/271 (32.10%), Postives = 136/271 (50.18%), Query Frame = 1
Query: 325 GWLLKQGGSSMQKWLWRFCVLYSTAQGHFLSYYVDIPETPLYSETGSHAERGTLDMSRIAFIRPVSAAKDTPPNAFDLVLLDKEWTLCA-------------------------------DSPKAMLLWMQVLARAAESDVAVMPDDETVFRVALASGGEEGPGGAIYTVTGEALVKISSMGVSIQQLNGINSGSGMGDDGEVFYPYTDFFKWVLVDLRDGMHGLLLKCFLDDSFEARVERLIVHAHAADIAAHIEYHIEKFMAFMHLRYE 1044
GWLLK+GG + +KWL R+ VLY T GH L YY D+ ET L++ ER +D R+ +RPVS+ DTP AFD+ +++ WT+CA D+ + W+ +LA A + DVAV+PDDE F V P +Y ++++ + GV++ + G + F+PYTD F+W ++ + G L L F +D + A+ + + A+ IA +E++IEK+MA+ H+R E
Sbjct: 332 GWLLKKGGFN-RKWLKRYFVLYKTCMGHILCYYSDVHETALFAHHPQ--ERNVIDCCRVELLRPVSSTPDTPSCAFDVQSIERTWTVCAANEVGKEGXXXXXXXXXXXXXXXXXXXXXXXDADTDLQQWLLLLASAIDMDVAVLPDDEVSFLVKP----RVDPSMKLYLDEYSTILRVHAWGVNVDMMEGEKRHT------VCFWPYTDLFRWTILSQK-GKIALQLTVFKED-YSAKSDYIFRTRKASQIARTLEFYIEKYMAWAHMRLE 587
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A7S3HBT1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBT1_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.630e-25 Identity = 69/197 (35.03%), Postives = 114/197 (57.87%), Query Frame = 1
Query: 475 RGTLDMSRIAFIRPVSAAKD---TPPNAFDLVLLDKEWTLCADSPKAMLLWMQVLARAAESDVAVMPDDETVFRVALASGGEEGPGGAIYTVTGEALVKISSMGVSIQQLNGINSGSGMGDDGE----VFYPYTDFFKWVLVDLRDGMHGLLLKCFLDDSFEARVERLIVHAHAADIAAHIEYHIEKFMAFMHLRYE 1044
R +D+++ FIRP S +D TP + FD+V +++EWTLCA++ W+++L +A + DVA++PD+E VF+V + P G + + +K+S+ G+S+ + MG +G+ F+ YTDF+KW L+ + G LL+ F D +F R+E + + A +A IE+ IEKFM +MH+R E
Sbjct: 2 RTFVDLAKCCFIRPGSNKQDNPDTPAHCFDIVTVEREWTLCAENADNEQQWLKLLTKAVDEDVAILPDEELVFKVKP----KVDPLGILPSNDYSTSLKVSAHGISV-------TTPVMGKEGQELEHYFWVYTDFYKWTLLS-QAGKLALLVNVFADATFNRRIEYIFRNKDALRLATAIEFFIEKFMCWMHIRLE 186
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A7S2GJS5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJS5_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.090e-22 Identity = 66/189 (34.92%), Postives = 96/189 (50.79%), Query Frame = 1
Query: 19 AMEFFWNRSRAEQCQPPQPGSAHGRVPYSVLSVKGEQKAPEPPLGRTVVVDVDG---------ATVRPGQGAIGAATAGTAARVASLV------GERMTLKMNGRVKPHWDAVVVHSGWLLKQGGSSMQKWLWRFCVLYSTAQGHFLSYYVDIPETPLYSETGSHAERGTLDMSRIAFIRPVSAAKDTP 540
A+EFF+NR + + + + HGR + ++ GE P P G + D+DG + ++PG A G R +L+ G + N HW+ V H GWLLK+GG + + W R+ VLYSTAQGHFL YY D ++PLYS AER +D+S+ FIRP++ + P
Sbjct: 203 AVEFFYNRMLETKGKVAKKQTTHGRRVVKMHTLTGEIIPPAYPQGNLTITDMDGHLIRPANAGSNIKPGFAASSGPARGNTGRRRTLLARVTNQGSGGVVHENREATGHWNTVCKHQGWLLKKGGRT-KTWQKRYAVLYSTAQGHFLCYYSDYTDSPLYST--QQAERNIIDLSKTTFIRPITKTEGAP 388
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A7S3HBI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBI0_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.210e-20 Identity = 66/158 (41.77%), Postives = 86/158 (54.43%), Query Frame = 1
Query: 1 ILQVRSAMEFFWNRSRAEQCQPPQP--GSAHGRVPYSVLSVKGEQKA-PEPP-LGRTVVVDVDGATVRPGQGAIGAATAGTAARVASLVGERMTLKMNGRVKPHWDAVVVHSGWLLKQGG---SSMQKWLWRFCVLYSTAQGHFLSYYVDIPETPLYS 453
+ V+ EFFWN+ R + Q Q GS HGR S+ ++ GE A P+ LG T V D+DG+TV +G A R L +N VKPHW VV+H GWLLKQGG + + W+ R+ VLY T+QGHFL YY D E P+Y+
Sbjct: 302 VRDVKHTFEFFWNKYRVGRGQSDQVKLGSTHGRPIVSLTTLSGEVAATPDMDVLGITEVRDIDGSTVH-----VGGKLAPRTTRAEQLP----VPPINREVKPHWHKVVLHQGWLLKQGGIGVGASKSWIKRYFVLYKTSQGHFLVYYSDFTECPMYT 450
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Match: A0A7S3XP44_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP44_HETAK) HSP 1 Score: 56.6 bits (135), Expect = 2.670e-5 Identity = 37/101 (36.63%), Postives = 49/101 (48.51%), Query Frame = 1
Query: 760 KISSMGVSIQQLNGINSGSGMGDDGEVFYPYTDFFKWVLVDLRDG------MHGLLLKCFLDDSFEARVERLIVHAHAADIAAHIEYHIEKFMAFMHLRYE 1044
K S G+ + I S + F+ YTDFFKW +V ++ GL+L F D SF + A ++A IE+HIEKFMA MHLR E
Sbjct: 7 KASDEGIVVDHRENIICTSSLNQ----FWCYTDFFKWSVVYKKEKNKEKKRARGLMLHVFTDTSFHNKFVLYFKTKAATELATTIEFHIEKFMARMHLRKE 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7940.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7940.1.1 >prot_P-wetherbeei_contig7940.1.1 ID=prot_P-wetherbeei_contig7940.1.1|Name=mRNA_P-wetherbeei_contig7940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=345bp MEFFWNRSRAEQCQPPQPGSAHGRVPYSVLSVKGEQKAPEPPLGRTVVVDback to top mRNA from alignment at P-wetherbeei_contig7940:273..1758+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7940.1.1 ID=mRNA_P-wetherbeei_contig7940.1.1|Name=mRNA_P-wetherbeei_contig7940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1486bp|location=Sequence derived from alignment at P-wetherbeei_contig7940:273..1758+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7940:273..1758+ >mRNA_P-wetherbeei_contig7940.1.1 ID=mRNA_P-wetherbeei_contig7940.1.1|Name=mRNA_P-wetherbeei_contig7940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1035bp|location=Sequence derived from alignment at P-wetherbeei_contig7940:273..1758+ (Phaeothamnion wetherbeei SAG_119_79)back to top |