mRNA_P-wetherbeei_contig793.1.6 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig793.1.6
Unique NamemRNA_P-wetherbeei_contig793.1.6
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: A0A836CN64_9STRA (KRR1 small subunit processome component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN64_9STRA)

HSP 1 Score: 458 bits (1179), Expect = 6.560e-153
Identity = 228/281 (81.14%), Postives = 247/281 (87.90%), Query Frame = 1
Query:  853 RNKRKYRRDKPWDNENIDHWKLEEWKDEDMPGPLLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVVRAKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEK 1695
            +N RKYRRDKPWDNE+IDHW   EWKDEDMPGPLLEESSFATLFPKYRE+YLREVWP+VTKALEK+G+ CELDLVEGSMTVRT+R+TRDPY +VKARD+VKLLARSIP  QALR LEDGV  DIIKIGGMVRNKERF KRRQRLVGPDGATLKALELLT CYILVQGNTV+ MG + G+KQAR V+VDCMNNIHPVYNIK LMIRRELAKDP+L  EDWSRFLP F K+NV R KP  VR KR YTPFPP Q PSKVD QLESGEYFL+E QRK + R+EK
Sbjct:   17 KNNRKYRRDKPWDNESIDHWAQPEWKDEDMPGPLLEESSFATLFPKYREKYLREVWPMVTKALEKRGIGCELDLVEGSMTVRTSRRTRDPYAVVKARDVVKLLARSIPAAQALRALEDGVNADIIKIGGMVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVACMGSYAGLKQARKVIVDCMNNIHPVYNIKTLMIRRELAKDPALAGEDWSRFLPSFNKRNVPRKKPRSVREKRAYTPFPPAQLPSKVDLQLESGEYFLNEAQRKGRARAEK 297          
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: A0A7S2DCQ6_9STRA (KRR-R motif-containing protein 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCQ6_9STRA)

HSP 1 Score: 444 bits (1141), Expect = 9.000e-147
Identity = 224/316 (70.89%), Postives = 260/316 (82.28%), Query Frame = 1
Query:  850 TRNKRKYRRDKPWDNENIDHWKLEEWKDEDMPGPLLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVVR--AKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEKQVVAAEKVTQKAEARLAAFIPPSDDADPLAPA 1791
            T+N  KYRRDKPWDN+ IDHWKLE+W + DM G LLEESSFATLFPKYRE+YLREVWP+VT+ L+KQ ++CELDL+EGSMTV+TTRKT DPY+I+KARDL+KLLARSIPV QAL+ILED + CD+IKIGGMV NKERF +RRQR++GPDGATLKALELLT+CY+LVQGNTVS MG  +GIKQ R VV DCMNNIHPVYNIK LMI+RELAKDP+L  E+W RFLPKF KK V R KP  VR  AKR YTPFPP Q PSKVD QLESGEYFL E QRKA++RSEKQ  AA     + + R   ++PP ++  P + A
Sbjct:    3 TKNHNKYRRDKPWDNDEIDHWKLEDWNEGDMHGSLLEESSFATLFPKYREKYLREVWPLVTRTLDKQKIACELDLIEGSMTVKTTRKTNDPYIILKARDLIKLLARSIPVLQALKILEDDMHCDVIKIGGMVGNKERFVRRRQRILGPDGATLKALELLTECYVLVQGNTVSTMGTIKGIKQVRKVVEDCMNNIHPVYNIKILMIKRELAKDPALAGENWDRFLPKFAKKTVDRKKPFKVRDTAKRTYTPFPPAQTPSKVDLQLESGEYFLSETQRKARRRSEKQADAAATSQARKKEREQIYVPPKEERLPSSAA 318          
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: B8C0X8_THAPS (KRR1 small subunit processome component n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0X8_THAPS)

HSP 1 Score: 431 bits (1107), Expect = 1.670e-141
Identity = 217/309 (70.23%), Postives = 253/309 (81.88%), Query Frame = 1
Query:  853 RNKRKYRRDKPWDNENIDHWKLEEWKDE----DMPGP-LLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVVRAKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEKQVVAAEKVTQKAEARLAAFIPPS 1764
            +N  KYRRDKPWDN +IDHW +  W +E     +PG  LLEESSFATLFPKYRE+YLREVWP+VTK+L+K  V+CEL+LVEGSMTVRTT+KT DPY+I+KARDL+KLLARSIP  QAL+IL D   C+IIKIGG+VRNKERF KRRQRL+GPDGATLKALELLTQCYILVQGNTVSVMG ++GIKQ R V++DCMNNIHPVYNIK LMI REL +DP L+ E W RFLP FKKKNVKR KP  ++ K+ YTPFPP Q PSK+D QLESGEYFL ER+RKAK+  EK++ + EK  +K  AR   F+ PS
Sbjct:   22 KNHNKYRRDKPWDNPSIDHWAITPWDEETNNDSLPGGRLLEESSFATLFPKYREKYLREVWPLVTKSLDKYKVACELNLVEGSMTVRTTKKTSDPYIILKARDLIKLLARSIPAPQALKILNDDHHCEIIKIGGLVRNKERFVKRRQRLIGPDGATLKALELLTQCYILVQGNTVSVMGTYKGIKQTRNVILDCMNNIHPVYNIKRLMIMRELERDPKLKEESWERFLPTFKKKNVKRRKPHQLKKKKSYTPFPPAQQPSKIDLQLESGEYFLSERERKAKKLGEKKIASMEKTEEKRRARELEFVHPS 330          
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: W7TDG0_9STRA (KRR1 small subunit processome component n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDG0_9STRA)

HSP 1 Score: 424 bits (1090), Expect = 1.450e-139
Identity = 208/277 (75.09%), Postives = 241/277 (87.00%), Query Frame = 1
Query:  940 MPGPLLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVVRAKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEKQVVAAEKVTQKAEARLAAFIPPSDD 1770
            MPGPLLEESSFATLFPKYRE+YLREVWP+VT+ALEK GV+CEL+++EGSMTVRTTRKT DPYV+VKARDL+KLLARSIPVQQA+++LED V CDIIKIGG+VRNKERF KRRQRLVGPDGATLKALELLT C+ILVQGNTV+ MGP++GIK  R VVVDCM NIHP+Y+IK LMI+RELAKDP+L  E+W RFLP+FKKKNV RHKP VVR K+ YTPFPPPQ PSK+D QLESGEYFL E+QRK K++ EKQ  A E+   K E R   F+ P+++
Sbjct:    1 MPGPLLEESSFATLFPKYREKYLREVWPVVTRALEKVGVACELNIIEGSMTVRTTRKTSDPYVVVKARDLIKLLARSIPVQQAVKVLEDEVACDIIKIGGIVRNKERFVKRRQRLVGPDGATLKALELLTGCFILVQGNTVAAMGPYKGIKLVRNVVVDCMKNIHPIYHIKTLMIKRELAKDPTLAQENWDRFLPQFKKKNVPRHKPQVVRPKKAYTPFPPPQQPSKIDLQLESGEYFLTEQQRKLKKKQEKQAQATERAATKREEREKEFVAPAEE 277          
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: A0A1V9ZXJ5_9STRA (KRR1 small subunit processome component n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXJ5_9STRA)

HSP 1 Score: 422 bits (1085), Expect = 7.890e-139
Identity = 200/282 (70.92%), Postives = 243/282 (86.17%), Query Frame = 1
Query:  868 YRRDKPWDNENIDHWKLEEWKDEDMPGPLLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVVRAKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEKQVVAAE 1713
            +R+DKPWDNE I+HWK+++WKDE+ P  +LEESSFATLFPKYRE+YLREVWPIVTKAL+   + CEL+L+EGSMTVRTTRKT DPY+I+KARDL+KLLARSIPV QA++IL+D V CDIIKIGG+VRNKERF KRRQRLVGPDGATLKA+ELLT CY+LVQGNTVS MGP+ G++  R +V DC +NIHP+YNIK LMI+RELAKDP+LQ E+W RFLP FKKKNV+  KP VVR K+ YTPFPP Q PSK+D+++ESGEYF+   +RKA +++EKQ +  E
Sbjct:   15 HRKDKPWDNETIEHWKIDQWKDEENPTGMLEESSFATLFPKYREKYLREVWPIVTKALDAYKIVCELNLIEGSMTVRTTRKTSDPYIILKARDLIKLLARSIPVNQAVKILDDEVQCDIIKIGGLVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGPYSGLRHIRKIVEDCFHNIHPIYNIKTLMIKRELAKDPALQGENWDRFLPVFKKKNVQTKKPHVVREKKEYTPFPPAQMPSKIDKEIESGEYFMKAHERKAMKKAEKQAINLE 296          
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: A0A7S1UII9_9STRA (KRR1 small subunit processome component n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UII9_9STRA)

HSP 1 Score: 420 bits (1080), Expect = 1.270e-138
Identity = 208/289 (71.97%), Postives = 243/289 (84.08%), Query Frame = 1
Query:  859 KRKYRRDKPWDNENIDHWKLEEWKDEDMPG-PLLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVVR--AKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEKQVVAAEK 1716
            K KYRR KPWD++ IDHWK EEW + DM G PLLEESSFATLFPKYRE+YLREVWP+VT+AL+K G+ CEL+L+EGSMTV+TTRKT DPY I+KARD++KLLARS+P  QAL+ LED V CDIIKIGG+VRNK+RF KRRQRLVGPDG+TLKALELLT CY+LVQGNTVS MGPH+GIKQ R VV+DCM NIHP+YNIK LMI+RELAKDP+L ++ W RFLP+F+K+NVKR KP  VR  A R YTPFPP Q PSKVD QLESGEYFL   Q+++ ++ EK   AA K
Sbjct:   15 KNKYRRAKPWDHDGIDHWKQEEWNEGDMAGGPLLEESSFATLFPKYREKYLREVWPMVTRALQKAGIGCELNLIEGSMTVKTTRKTWDPYSILKARDVIKLLARSVPAPQALKALEDNVACDIIKIGGLVRNKDRFVKRRQRLVGPDGSTLKALELLTGCYVLVQGNTVSAMGPHKGIKQVRKVVIDCMENIHPIYNIKTLMIKRELAKDPTLANQSWDRFLPRFQKRNVKRRKPQKVRDTAARTYTPFPPAQQPSKVDMQLESGEYFLSAEQKESLKQLEKTQTAARK 303          
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: A0A196SI70_BLAHN (KRR1 small subunit processome component n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SI70_BLAHN)

HSP 1 Score: 420 bits (1079), Expect = 1.350e-138
Identity = 203/305 (66.56%), Postives = 253/305 (82.95%), Query Frame = 1
Query:  859 KRKYRRDKPWDNENIDHWKLEEWKDEDMPGPLLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVVRAKRMYTPFPPPQ--APSKVDRQLESGEYFLDERQRKAKQRSEKQVVAAEKVTQKAEARLAAFIPPSD 1767
            KR YR+DKPWD ++IDHWK+EEWKD+DM  PLLEESSFAT+FP+YRE+YLREVWP+VTK L+K G++CELD +EG+MTVRTTRKT+DPY+IVKARDL+KLLARS+P  QA+RILED + CDIIKIGG V +KERF KRRQRL+GP+GATLKALELLT+CYILVQGNTV+VMG  QG+K  R +V+DCM NIHP+Y IK LMI+RELAKDPS+++E+W RFLPKFKK+N    K A +  K+ YTPFPP     PSK+D+Q+ESGEYFL E+Q+K +  ++K+  AA +  +K E R   F+PP +
Sbjct:   21 KRNYRKDKPWDGDHIDHWKIEEWKDDDMKAPLLEESSFATMFPRYREQYLREVWPLVTKELDKVGIACELDCIEGTMTVRTTRKTKDPYIIVKARDLIKLLARSVPYNQAIRILEDNMQCDIIKIGGYVASKERFVKRRQRLLGPEGATLKALELLTECYILVQGNTVAVMGSFQGLKMVRRIVIDCMKNIHPIYAIKTLMIKRELAKDPSMKNENWDRFLPKFKKENKPEKKKAPIVPKK-YTPFPPENHITPSKIDKQIESGEYFLSEKQKKERASAQKRAEAAVRSAKKREEREKMFVPPKE 324          
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: A0A1V9ZKL3_9STRA (KRR1 small subunit processome component n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZKL3_9STRA)

HSP 1 Score: 421 bits (1081), Expect = 3.040e-138
Identity = 205/303 (67.66%), Postives = 254/303 (83.83%), Query Frame = 1
Query:  862 RKYRRDKPWDNENIDHWKLEEWKDEDMPGPLLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVVRAKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEKQVVAAE-KVTQKAEARLAAFIPPSD 1767
            +K+R+DKPWD  ++ HWK+++WK+E+ P  +LEESSFATLFPKYRE+YLREVWPIVTKAL+   + CEL+L+EGSMTVRTTRKT DPY+I+KARDL+KLLARSIPV QA++IL+D V CDIIKIGG+VRNKERF KRRQRLVGPDGATLKA+ELLT CY+LVQGNTVS MGP+ G++  R +V DC +N+HP+YNIK LMI+RELAKDP+LQ E+W RFLP FKKKN++  KP VVR KR YTPFPP Q PSKVD+++ESGEYF+ E +RKA +++ K  V  E K  +KAE + A F+ PS+
Sbjct:    7 KKHRKDKPWDTPDVAHWKIDQWKEEENPTGMLEESSFATLFPKYREKYLREVWPIVTKALDGYKIVCELNLIEGSMTVRTTRKTSDPYIILKARDLIKLLARSIPVNQAIKILDDEVQCDIIKIGGLVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGPYSGLRHVRKIVEDCFHNVHPIYNIKTLMIKRELAKDPALQGENWERFLPVFKKKNIQTKKPHVVREKREYTPFPPAQLPSKVDKEIESGEYFMKEHERKAMKKAAKAAVNLEAKEARKAE-KAATFVAPSE 308          
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: A0A7S2KVF1_9STRA (KRR1 small subunit processome component n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KVF1_9STRA)

HSP 1 Score: 421 bits (1082), Expect = 1.080e-137
Identity = 223/334 (66.77%), Postives = 256/334 (76.65%), Query Frame = 1
Query:  853 RNKRKYRRDKPWDNENIDHWKLEEWKD---EDMPGP-LLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVV--------------------RAKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEKQVVAAEKVTQKAEARLAAFIPPS--DDAD 1776
            +N  KYRRDKPWDN +IDHW +  W D   +++PG  LLEESSFATLFPKYRE+YLREVWP++T++L+K  ++CEL+LVEGSMTVRTTRKT DPYVI+KARDL+KLLARSIP  QAL+IL D   C+IIKIGG+VRNKERF KRRQRL+GPDGATLKALELLTQCYILVQGNTVSVMG H+GIKQ R VV++CMNNIHPVYNIK LMI REL KDP LQ+E W RFLP FKKKNV+R KP  +                       + YTPFPP Q PSK+D QLESGEYFL ERQRKAK+ +EKQ  + EK  +K  AR   FI PS   DAD
Sbjct:   14 KNHNKYRRDKPWDNPDIDHWSVSPWDDTAGDNLPGGRLLEESSFATLFPKYREKYLREVWPLITRSLDKVKIACELNLVEGSMTVRTTRKTSDPYVILKARDLIKLLARSIPAPQALKILNDEYNCEIIKIGGLVRNKERFVKRRQRLIGPDGATLKALELLTQCYILVQGNTVSVMGTHKGIKQTRMVVLECMNNIHPVYNIKRLMIMRELEKDPKLQNESWERFLPTFKKKNVQRRKPHQLVEXXXXXXXXXXXXXXXXXXXXXKSYTPFPPAQQPSKIDLQLESGEYFLSERQRKAKKLAEKQQASVEKTNEKRRAREREFIHPSLLKDAD 347          
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Match: D7FR23_ECTSI (KRR-R motif-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR23_ECTSI)

HSP 1 Score: 418 bits (1074), Expect = 9.230e-137
Identity = 212/275 (77.09%), Postives = 237/275 (86.18%), Query Frame = 1
Query:  952 LLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTVRTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMVRNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNVKRHKPAVVRAKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEKQVVAAEKVTQKAEARLAAFIPPSDDAD 1776
            LLEESSFATLFPKYRE+YLREVWPIVTKAL+K+GVSCELDL+EGSMTVRTTRKTRDPYVIVKARDL+KLLARSIP QQALR+LED V CDIIKIGGMVRNKERF KRR RLVGPDG+TLKALELLT CY+LVQGNTVS MG +QG+KQ R VV DCMNN+HPVYNIK LMIRRELAKDP+L+ E+W RFLP+F KKNVKR KPAV+R K++YTPFPP Q P KVD QLESGE+FL+ERQRKAK+R+EK+  +AE    K + R     P   D D
Sbjct:   32 LLEESSFATLFPKYREKYLREVWPIVTKALQKRGVSCELDLIEGSMTVRTTRKTRDPYVIVKARDLIKLLARSIPAQQALRVLEDDVNCDIIKIGGMVRNKERFVKRRARLVGPDGSTLKALELLTGCYVLVQGNTVSAMGSYQGLKQVRKVVTDCMNNVHPVYNIKTLMIRRELAKDPNLKDENWERFLPQFHKKNVKRKKPAVIREKKVYTPFPPAQTPRKVDEQLESGEFFLNERQRKAKKRAEKKAKSAELSAAKRKNREQDLEPTEGDYD 306          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig793.1.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CN64_9STRA6.560e-15381.14KRR1 small subunit processome component n=1 Tax=Tr... [more]
A0A7S2DCQ6_9STRA9.000e-14770.89KRR-R motif-containing protein 1 n=1 Tax=Dictyocha... [more]
B8C0X8_THAPS1.670e-14170.23KRR1 small subunit processome component n=1 Tax=Th... [more]
W7TDG0_9STRA1.450e-13975.09KRR1 small subunit processome component n=2 Tax=Mo... [more]
A0A1V9ZXJ5_9STRA7.890e-13970.92KRR1 small subunit processome component n=1 Tax=Th... [more]
A0A7S1UII9_9STRA1.270e-13871.97KRR1 small subunit processome component n=1 Tax=Ph... [more]
A0A196SI70_BLAHN1.350e-13866.56KRR1 small subunit processome component n=1 Tax=Bl... [more]
A0A1V9ZKL3_9STRA3.040e-13867.66KRR1 small subunit processome component n=3 Tax=Sa... [more]
A0A7S2KVF1_9STRA1.080e-13766.77KRR1 small subunit processome component n=1 Tax=Sk... [more]
D7FR23_ECTSI9.230e-13777.09KRR-R motif-containing protein 1 n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig793contigP-wetherbeei_contig793:176..4333 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog35128.Thaps268598
Model size2243
Max annot lvl2836|Bacillariophyta
KEGG koko:K06961
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.89e-146
EggNOG OGsCOG1094@1|root,KOG2874@2759|Eukaryota,2XBS2@2836|Bacillariophyta
Ec32 ortholog descriptionK Homology domain, type 1
Ec32 orthologEc-09_003790.1
DescriptionRequired for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly
Cds size1359
COG categoryA
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig793.1.6prot_P-wetherbeei_contig793.1.6Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig793 265..3392 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187009.6072984-UTR-P-wetherbeei_contig793:175..2641683187009.6072984-UTR-P-wetherbeei_contig793:175..264Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig793 176..264 -
1683187009.6638372-UTR-P-wetherbeei_contig793:3392..38461683187009.6638372-UTR-P-wetherbeei_contig793:3392..3846Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig793 3393..3846 -
1683187009.672022-UTR-P-wetherbeei_contig793:3992..43331683187009.672022-UTR-P-wetherbeei_contig793:3992..4333Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig793 3993..4333 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187009.6166756-CDS-P-wetherbeei_contig793:264..7201683187009.6166756-CDS-P-wetherbeei_contig793:264..720Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig793 265..720 -
1683187009.6245987-CDS-P-wetherbeei_contig793:1008..11491683187009.6245987-CDS-P-wetherbeei_contig793:1008..1149Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig793 1009..1149 -
1683187009.6326206-CDS-P-wetherbeei_contig793:1572..17461683187009.6326206-CDS-P-wetherbeei_contig793:1572..1746Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig793 1573..1746 -
1683187009.6403875-CDS-P-wetherbeei_contig793:2135..22881683187009.6403875-CDS-P-wetherbeei_contig793:2135..2288Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig793 2136..2288 -
1683187009.6481378-CDS-P-wetherbeei_contig793:2693..28791683187009.6481378-CDS-P-wetherbeei_contig793:2693..2879Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig793 2694..2879 -
1683187009.6558864-CDS-P-wetherbeei_contig793:3143..33921683187009.6558864-CDS-P-wetherbeei_contig793:3143..3392Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig793 3144..3392 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig793.1.6

>prot_P-wetherbeei_contig793.1.6 ID=prot_P-wetherbeei_contig793.1.6|Name=mRNA_P-wetherbeei_contig793.1.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=453bp
MAANGGDEAGASASAGTDTRNKRKYRRDKPWDNENIDHWKLEEWKDEDMP
GPLLEESSFATLFPKYRERYLREVWPIVTKALEKQGVSCELDLVEGSMTV
RTTRKTRDPYVIVKARDLVKLLARSIPVQQALRILEDGVFCDIIKIGGMV
RNKERFAKRRQRLVGPDGATLKALELLTQCYILVQGNTVSVMGPHQGIKQ
ARTVVVDCMNNIHPVYNIKALMIRRELAKDPSLQHEDWSRFLPKFKKKNV
KRHKPAVVRAKRMYTPFPPPQAPSKVDRQLESGEYFLDERQRKAKQRSEK
QVVAAEKVTQKAEARLAAFIPPSDDADPLAPALPPPKRSKAAAAEAAGAA
GPANPSATPKVRFAGDDGAAPIGAAATAASMGSRSGRGGSESAGSGGAGA
GGGGSGDDVRSMAARARAAASVAEGKRGRAERPVEDFVEMAGPPRKKGKR
HS*
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mRNA from alignment at P-wetherbeei_contig793:176..4333-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig793.1.6 ID=mRNA_P-wetherbeei_contig793.1.6|Name=mRNA_P-wetherbeei_contig793.1.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4158bp|location=Sequence derived from alignment at P-wetherbeei_contig793:176..4333- (Phaeothamnion wetherbeei SAG_119_79)
GTCAGGTGCGGCGTTCGCGTCTTCAATGCCCGCTTTCCAATGGCGACTGC AGCGGTCCCGGAACCGGCTAAGCTTAAGGAATGCCCCTGCGGATTGATCG CCAGGGCAAGTAAAAGGTTGCAATAAGCCGACACGCTGGCTGCCCAAGCA TGCTGCCAATTCTTCTGGGGACCAAGGAGAAGCTCATCGAACTGTCAGTC GGGTGAGCAGACAAAGCTCCTACCTTAAAATCGTCACCCCGTCCGATGAT GATGCCCCCCATAATCATGACGCTGCCGAGGCCCAGGCCTGCGGCAAGAG AAGGCCGCGACTTAGCTTTATAATAACCGGTCAATCCCCCTGCGACGGGA ACGAGAAAAAGCTTTTCGATTAGAAAGGGTGGGTGGCAGGAGAAACGTAT ACCTTCCCCGAGTGGATCCAAAAAAGGCGTGCAGGAAAAACTCAATGGAA ATGCCTATGAGAGGAAGGGAAGCCCCCTGACACGCCTCTTGATCTTGACG CTTCTGAGCCAGGACAGAAGCGATATCGGGTTTACGGAAAATACGACGGA AGCGAGGTCAAGCCTCCAAATCTCCGGGACAAGGAGGTAACGCCACTTTT CACCGCAGGATTGGTTATACAACCATTTTCAGAGCCTCAGAAATGTGAAA GAAGGGAGAGAGAGGGAAAAGAAGAGGAAGATGAAGGAGAGAGGTTGCAA ACGTGCCTGCTATGAGGACACCACCGAGAGCATAGCTCGTGTGCTGGCTT CCGCCCATGGTACAGTGGGGTAAATCCCGAAATCAGGACAAATGGGAGGC ACAAAAGTCTCACCCCCCAAAAAGGCTACTTTGCCATCTCCTGTGCGAAA CCCACGATAGCCGCCCTCATACCTCTCCGTGCAGAAAAGAGCCCCAAAAT ACCTTCAAAGGTTGAGGCCCAAAGGGAGAAAGAAGTCCTCGATGGCAGCA AACGGGGGTGACGAAGCCGGAGCCTCGGCAAGCGCTGGAACGGATACCCG CAACAAGCGCAAATACCGGCGCGACAAGCCCTGGGACAACGAGAACATTG ACCACTGGAAGCTGGAGGAATGGAAGGACGAGGACATGCCGGGGCCTCTG CTGGAGGAGAGCAGCTTCGCGACGCTCTTCCCCAAATACCGAGAGCGTTA TTTGCGGGAGGTCTGGCCGATTGTCACCAAGGCGCTCGAGGCGAGACGTA ATATCGAATTTCTTGACCTGCATTTAGCACACATTTTTCCTGATCAAGAC GGTTTGTGCAACACGGCCCGCACTCTAGATTTTCTTTGTAAATCTTTCTG ATATCTCCTTCGGATTACATTCCTCAGTCTTACTGTCGATTTGAAAATCT CACTTCTCTCCCTCACTCGACGCCTGCCGTGACCTCTCTGACGAAATAAA CACAAAACTCGTTCCGAAACTCCTATTTCCTTCCTTCCTTTCCGCCACCA ACAGAAGCAGGGCGTGTCATGCGAGCTGGACCTGGTGGAGGGGTCCATGA CGGTGCGGACCACGCGCAAGACGCGCGACCCCTATGTCATTGTCAAGGCG CGCGACCTCGTCAAGCTGCTGGCGCGCTCCATCCCCGTGCAGCAGGCGCT ACGCATCCTCGAGGACGGCGTCTTTTGCGACATCATCAAGGTATCGCGGT GGCGGCGACCGCCGCGGCGGCGACATTGCAGAACGGTGGAGGGACGAAAA GAAGCTTGCCATAATTGGGGGGACGGGGGACATTTCGTTTGCGGAGATGC AGAGTCGAGTGCAGGTCCGTTTTGGCCGAGGCTCCAGTTCCTGTCTGAGC GGTTTCAGCAGCGACGACTTGAAGGAGAGGGGATACGACGGGGCCTTGAA AAGGGTTCCTCAAAAACTGCCCCAGCACGCATGCTTGGCTTTTCTTCCCT TTCTCTCGGAAGTTCCTTTACACAGCCGATGCTTTCGGGACCCTGGTCGC CCCGTGTGACCCCCCTTTGCGTTGTCGGGGTGGTCAAACCACTGATGACA ACGACACAGTAAACCGGAACCCTACCCGCCCCACTCACTAAACAGATTGG CGGTATGGTGCGCAACAAAGAGCGGTTTGCGAAGCGGCGGCAGCGGCTGG TGGGGCCCGACGGTGCCACGCTCAAGGCGCTGGAGCTGCTGACGCAGTGC TACATTCTCGTCCAGGGCAACACTGTATCCGTTATGGGCCCGCATCAGGT CCGGTCTTGGTCTCATCCAGTCCGTTGCGGCGCGGTTCCTAGTGGTTTCA GAGGGTCGAATGGCGAGCGGGCGGGCGGGCGACTTAGCCGTAGTGGGCAT TGGTTCCGGCGGTAGCTGCGGTGGCGCGCTGACAGCGGTGGCGGCAGGTG GCAGGCAGTGGCGGGCGGTTGGGCGTCGAGCGCCCTCTCGTCACGTTCTT TCTCGCCGGTTCCGGAGCCGACGTCTCCGCGCTGATCCCCTGCTCCACGC TTTGCTGCTGCCGCTGCTTTTCCTAACCTGCCGTGATCCAAACATTGTAG TCTTTGCGGTATCCTCGCTCTCTTGCCCTTACCTCTCCTCATCGCGTTTG AAATCTGCCATCTGCCTGTCTGCCTGCACACTTGCAGGGCATCAAGCAAG CGCGCACCGTGGTGGTGGACTGCATGAACAACATCCACCCCGTCTACAAC ATCAAGGCGCTCATGATCCGCCGCGAGCTCGCCAAGGACCCGTCCCTGCA GCACGAGGACTGGAGCCGCTTCTTGCCCAAGTTCAAGAAGAAGAACGTCA AGCGCCACAAGGTAAAGCAAAGGGAAAAGAGGAGAAAGAGGAAGAGGAGT GGATTGAGGTAGTGTTGGAGGGGCTGCGCGCCGTTTGCTGGTTTGCTAGC TGTTTTCTTTCTGTGTTCTCCCTTGTTTTTCTTTGCTTCCCTGTTCCTGC AATCCATGCAGCATGCCTCTGGGGATTCTGCGCACAGCAGCTCTGCGGCG CTGCAACATCGACTTGGTGTTTCAAGCTTTCTCTTTTTCCCTTTTTCACC CACCCTGCCTCTGACCACGGTAGCTCCGCCGGTGCTGCCACCCTGCCGCC CCTCCCGCTGTTTTCCTTCTCCCGAACTCTCTTCCAATCTTGCAATGTCG GACGCACGAAACTGGCACGCCGTTTCGCCCCGCCTCGCCTACCGCTCTGG CCACCGCCCCGCCCGCCGCCCTGCCGCGCTGCAGCCGGCGGTGGTGCGGG CCAAGAGAATGTACACGCCCTTCCCGCCGCCGCAGGCGCCGAGCAAGGTG GACAGGCAGCTTGAAAGTGGCGAGTACTTCCTCGACGAGCGGCAGCGCAA GGCGAAGCAACGCTCCGAGAAGCAGGTGGGGAGCCTTGATATCACTTTCT CGGCGCATTTTTGGCCAGCGACGGCTGTGCACCCAAAAAATGTTACTGAG CTTTTCCCGTTGACATCGCTGCTGCAGCCGTTGACTGCGCTTGGGAGCGC TCCCAATGTCGGCTCGCTTGTGCGATTCGAGGGAAGTTTTTTGGATTGCT GTCTGCAGAATACAAGTAGACTATGGGTGCTGGTTTGCCCTTTGACTGAT GTCCCCCTTCTCTCCGAAATGGGTCACCGTGCTTGCATTCCACTTTGCTT TAACGAAATGCAGGTGGTGGCGGCGGAGAAGGTGACTCAGAAGGCAGAGG CCCGCCTGGCAGCGTTCATCCCTCCGTCGGACGATGCTGACCCGCTTGCG CCAGCGCTGCCGCCGCCGAAAAGGTCTAAAGCGGCGGCGGCGGAAGCAGC GGGGGCAGCAGGGCCTGCAAATCCTTCAGCAACGCCAAAGGTCCGTTTTG CGGGCGACGACGGTGCCGCCCCCATCGGCGCCGCCGCCACTGCCGCCTCA ATGGGAAGCCGGAGCGGTCGCGGTGGTAGTGAAAGCGCCGGCAGCGGCGG CGCAGGCGCAGGCGGCGGGGGCAGCGGGGACGACGTGCGATCGATGGCGG CGAGGGCGCGGGCGGCAGCGTCGGTGGCGGAGGGCAAGCGCGGTCGCGCC GAGCGGCCGGTGGAAGATTTCGTCGAAATGGCAGGGCCGCCACGAAAGAA AGGGAAGAGGCACAGCTGATGGCCGATCAAAGGTGTTGGACGCGATTGGA GGAAGCATGGGCTCGGGACATTAAGCACGGACGATATAATCGTAATCAAG TTCCTGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig793:176..4333-

>mRNA_P-wetherbeei_contig793.1.6 ID=mRNA_P-wetherbeei_contig793.1.6|Name=mRNA_P-wetherbeei_contig793.1.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1359bp|location=Sequence derived from alignment at P-wetherbeei_contig793:176..4333- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGCAAACGGGGGTGACGAAGCCGGAGCCTCGGCAAGCGCTGGAAC
GGATACCCGCAACAAGCGCAAATACCGGCGCGACAAGCCCTGGGACAACG
AGAACATTGACCACTGGAAGCTGGAGGAATGGAAGGACGAGGACATGCCG
GGGCCTCTGCTGGAGGAGAGCAGCTTCGCGACGCTCTTCCCCAAATACCG
AGAGCGTTATTTGCGGGAGGTCTGGCCGATTGTCACCAAGGCGCTCGAGA
AGCAGGGCGTGTCATGCGAGCTGGACCTGGTGGAGGGGTCCATGACGGTG
CGGACCACGCGCAAGACGCGCGACCCCTATGTCATTGTCAAGGCGCGCGA
CCTCGTCAAGCTGCTGGCGCGCTCCATCCCCGTGCAGCAGGCGCTACGCA
TCCTCGAGGACGGCGTCTTTTGCGACATCATCAAGATTGGCGGTATGGTG
CGCAACAAAGAGCGGTTTGCGAAGCGGCGGCAGCGGCTGGTGGGGCCCGA
CGGTGCCACGCTCAAGGCGCTGGAGCTGCTGACGCAGTGCTACATTCTCG
TCCAGGGCAACACTGTATCCGTTATGGGCCCGCATCAGGGCATCAAGCAA
GCGCGCACCGTGGTGGTGGACTGCATGAACAACATCCACCCCGTCTACAA
CATCAAGGCGCTCATGATCCGCCGCGAGCTCGCCAAGGACCCGTCCCTGC
AGCACGAGGACTGGAGCCGCTTCTTGCCCAAGTTCAAGAAGAAGAACGTC
AAGCGCCACAAGCCGGCGGTGGTGCGGGCCAAGAGAATGTACACGCCCTT
CCCGCCGCCGCAGGCGCCGAGCAAGGTGGACAGGCAGCTTGAAAGTGGCG
AGTACTTCCTCGACGAGCGGCAGCGCAAGGCGAAGCAACGCTCCGAGAAG
CAGGTGGTGGCGGCGGAGAAGGTGACTCAGAAGGCAGAGGCCCGCCTGGC
AGCGTTCATCCCTCCGTCGGACGATGCTGACCCGCTTGCGCCAGCGCTGC
CGCCGCCGAAAAGGTCTAAAGCGGCGGCGGCGGAAGCAGCGGGGGCAGCA
GGGCCTGCAAATCCTTCAGCAACGCCAAAGGTCCGTTTTGCGGGCGACGA
CGGTGCCGCCCCCATCGGCGCCGCCGCCACTGCCGCCTCAATGGGAAGCC
GGAGCGGTCGCGGTGGTAGTGAAAGCGCCGGCAGCGGCGGCGCAGGCGCA
GGCGGCGGGGGCAGCGGGGACGACGTGCGATCGATGGCGGCGAGGGCGCG
GGCGGCAGCGTCGGTGGCGGAGGGCAAGCGCGGTCGCGCCGAGCGGCCGG
TGGAAGATTTCGTCGAAATGGCAGGGCCGCCACGAAAGAAAGGGAAGAGG
CACAGCTGA
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