mRNA_P-wetherbeei_contig7927.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7927.2.1
Unique NamemRNA_P-wetherbeei_contig7927.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A3C1LA74_9ACTN (23S rRNA (Cytosine(1962)-C(5))-methyltransferase RlmI n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A3C1LA74_9ACTN)

HSP 1 Score: 558 bits (1438), Expect = 7.310e-197
Identity = 293/399 (73.43%), Postives = 324/399 (81.20%), Query Frame = 1
Query:    1 NTVSPVNARLVLRPNRERSLKRHHPWVFSGGVAHVSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLARR-TDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAILTAD 1194
            ++ SP +A L L+P+RERSL R HPW+FSGGVA V G PAPG TVLV   DGT LG AAYSP+SQIRARMWTF AD  VDD  + ARV AA  RRS LL+   TDSAR+VFSEAD +PG+IADRYGDTVV Q T+AGA+AW   + DAL +LPG+A VYERSD D+REREGL  RVGLLRG  P  DLVA E G RFAVDV  GHKTGFYLDQR  R  V+  A G  VLNVFSYTGAFSVIAAA GA SLLSIDSSGPAL  A RNA LN VD+GEL EADAFTALRGLRDR + YDLI+LDPPKLAN+E QLDKA+RAYKDLNLLA+KLLAP G LLT+SCSGAM+MDLFQKV+AGAALDAKR+VRI+ RLHQPSDHPVPL FPEAEYLKG +L AD
Sbjct:    9 SSASPGSATLWLQPSRERSLTRRHPWIFSGGVARVEGAPAPGHTVLVRGADGTQLGWAAYSPASQIRARMWTFAADDTVDDSFVAARVAAAXARRSLLLSSGLTDSARLVFSEADGVPGLIADRYGDTVVCQLTTAGAEAWREVLADALFALPGVACVYERSDADVREREGLAPRVGLLRGSPPATDLVAHESGHRFAVDVAGGHKTGFYLDQRDGRAAVAAVAAGRRVLNVFSYTGAFSVIAAACGASSLLSIDSSGPALAVAARNASLNDVDVGELMEADAFTALRGLRDRAQQYDLILLDPPKLANTERQLDKATRAYKDLNLLAVKLLAPGGVLLTWSCSGAMSMDLFQKVVAGAALDAKRDVRIIGRLHQPSDHPVPLAFPEAEYLKGLVLQAD 407          
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A3C2AZF8_9ACTN (23S rRNA (Cytosine(1962)-C(5))-methyltransferase RlmI n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2AZF8_9ACTN)

HSP 1 Score: 550 bits (1418), Expect = 5.030e-194
Identity = 287/394 (72.84%), Postives = 321/394 (81.47%), Query Frame = 1
Query:   16 VNARLVLRPNRERSLKRHHPWVFSGGVAHVSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLAR-RTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAILTAD 1194
            + A L LRPNR+RSLKR HPWVFSG VA V G PAPGETV+V + +G  LG AAYSP SQIRARMWTF+ D VVDD  + A+V AA+ RRS LL+   TDSAR+VFSEAD +PGV+ADRYGDT+V Q T+AGAD W   + DAL +LPG+ATVYERSD D+REREGL  RVGLLRG AP  DLVA E GFR+AVDV  GHKTGFYLDQR AR  V   A G  VLNVFSYTGAF+V+AAA GA SLLSIDSSGPAL TA RN  LN VD+GEL+E DAFTALRGLRDR + +DLI+LDPPKLANSE QL+KASRAYKDLNLLA+KLLAP G LLT+SCSGAMTM+LFQKV+AGAAL  +R VRIV RLHQPSDHPVPL FPEAEYLKG +L AD
Sbjct:    1 MTASLWLRPNRDRSLKRRHPWVFSGAVARVDGAPAPGETVMVRSAEGDTLGWAAYSPESQIRARMWTFEPDVVVDDAFVAAQVTAAAARRSGLLSGGATDSARLVFSEADGVPGVVADRYGDTIVCQLTTAGADRWREVLADALVALPGVATVYERSDADVREREGLGPRVGLLRGGAPAADLVAHEAGFRYAVDVEGGHKTGFYLDQRDARTAVGMWAPGRRVLNVFSYTGAFTVVAAARGAASLLSIDSSGPALATAARNGGLNDVDMGELREGDAFTALRGLRDRAQQFDLILLDPPKLANSEGQLEKASRAYKDLNLLAVKLLAPGGVLLTWSCSGAMTMELFQKVVAGAALAPRRTVRIVGRLHQPSDHPVPLAFPEAEYLKGLVLVAD 394          
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A7K1BBA6_9ACTN (23S rRNA (Cytosine(1962)-C(5))-methyltransferase RlmI n=2 Tax=root TaxID=1 RepID=A0A7K1BBA6_9ACTN)

HSP 1 Score: 520 bits (1340), Expect = 6.450e-182
Identity = 268/389 (68.89%), Postives = 305/389 (78.41%), Query Frame = 1
Query:   28 LVLRPNRERSLKRHHPWVFSGGVAHVSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLARRTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAILTAD 1194
            + LR  R+RS+ R HPWVFSGG+  V G P  G+TVLV  D G PLG  AYSP SQIR RMW+F  D V+D   +  R+  A+ RR  LLA  TDSAR+VFSEAD +PGV+ADRYGDT+VVQ TSAGADAW   V DAL SLPGI  V+ERSD D+REREGL+ R G LRG AP PDLVA E  +RF VDV  GHKTGFYLDQR AR  ++  A G + LNVFSYTGAFSV+AA SGA S+LSIDSSGPAL+ A+RN  +N +D+GEL EADAFTALRGLRDR R YDLI LDPPKLAN+E Q++KASRAYKDLNLLA+KLLAP GTLLT+SCSGAMT +LFQKV+AGAALD+ R  RIV RL QPSDHPVPL FPEAEYLKG IL A+
Sbjct:   22 VTLRAGRDRSVTRRHPWVFSGGIEAVEGRPGRGDTVLVEDDAGRPLGWGAYSPESQIRVRMWSFSPDDVIDAAFVDGRITRAAARRDALLASGTDSARLVFSEADGVPGVVADRYGDTIVVQLTSAGADAWREVVADALFSLPGIRCVHERSDADMREREGLDARSGTLRGDAPDPDLVAHEGPWRFVVDVTGGHKTGFYLDQRDARAAIARLAPGRTFLNVFSYTGAFSVVAAGSGAASVLSIDSSGPALDVARRNGEVNGLDLGELMEADAFTALRGLRDRARQYDLIALDPPKLANNERQVEKASRAYKDLNLLALKLLAPGGTLLTWSCSGAMTAELFQKVVAGAALDSGRTARIVGRLGQPSDHPVPLAFPEAEYLKGLILEAE 410          
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A6I3F094_9ACTN (Methyltransferase n=5 Tax=root TaxID=1 RepID=A0A6I3F094_9ACTN)

HSP 1 Score: 520 bits (1339), Expect = 6.640e-182
Identity = 273/392 (69.64%), Postives = 308/392 (78.57%), Query Frame = 1
Query:   34 LRPNRERSLKRHHPWVFSGGVAHVSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLAR-RTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRN-----VRIVDRLHQPSDHPVPLWFPEAEYLKGAILTA 1191
            L+   ERSL R HPWVFSG V  V G+P PG+TVLV   DG  LG AAYSP+S+IRARMWTFD    V    +  RV AA+ERRS LL+   TDSAR+VFSEAD +PG+IADRYGDT+V Q T+ GADAW   + DAL +LPG+  VYERSD D+REREGL+ RVGL+RG AP PDLVA E GFRFAV+V  GHKTGFYLDQR AR  +++ A G SVLNVFSYTGAFSVIAA SGA ++ SIDSSGPAL  A RN  LN VD+GEL E DAFT LRGLRDR + YDLI+LDPPKLAN+E QLDKASRAYKDLNLLA KLLAP G L+T+SCSGAM+MDLFQKV+AGAALDA RN     +RI+ RLHQPSDHPVPL FPEAEYLKG IL A
Sbjct:    9 LKAAAERSLARRHPWVFSGAVTRVEGDPQPGDTVLVKGADGNGLGLAAYSPASRIRARMWTFDPTEQVTAGFVATRVTAAAERRSALLSSGHTDSARLVFSEADGVPGLIADRYGDTIVCQLTTVGADAWREVLADALFALPGVECVYERSDADVREREGLQARVGLMRGRAPSPDLVANEGGFRFAVEVEGGHKTGFYLDQRDARAAMAQWAPGRSVLNVFSYTGAFSVIAARSGASAVTSIDSSGPALAVAVRNGELNGVDVGELIEGDAFTTLRGLRDRAKQYDLILLDPPKLANTEQQLDKASRAYKDLNLLAAKLLAPGGVLMTWSCSGAMSMDLFQKVVAGAALDAGRNGAGRELRIIGRLHQPSDHPVPLSFPEAEYLKGLILQA 400          
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A6I3WTD1_9ACTN (Methyltransferase n=2 Tax=root TaxID=1 RepID=A0A6I3WTD1_9ACTN)

HSP 1 Score: 480 bits (1235), Expect = 3.520e-166
Identity = 246/393 (62.60%), Postives = 296/393 (75.32%), Query Frame = 1
Query:   28 LVLRPNRERSLKRHHPWVFSGGVAHVSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLARRTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEH----GFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAILTAD 1194
            +VLRP R++S++R HPW+FSGGVA V GNP PG+TV V +  G  LG+ AYSP SQ+R RMWTFD DTV+D+  +  RV  +++RR R+ A  +DS R+VFSEAD +PGVIADRYG+ VVVQ  SAGA+ W   V DAL S+ G+  VYERSD D REREGL  R G+LRG  P  + +  E      +RFAV    G KTGFYLDQRHAR  ++  A G  VLN FSYTGAFSVIAAA+GA S+ S+DSSGPAL  A+RNA +N V++GE  E DAF  LR LRDR R YDLI+LDPPKLA +EAQ+D+A+RAYKDLNLLA KLLAP G L+TFSCSG M+ DLFQKV+AGAALDA+RN+RI+ RL QP DHPVPL FPEA YLKG +L A+
Sbjct:    5 VVLRPGRDKSVRRWHPWIFSGGVAEVRGNPGPGDTVRVVSAQGEALGAGAYSPDSQLRVRMWTFDPDTVIDELFVARRVVESAQRRQRMYAD-SDSVRLVFSEADGVPGVIADRYGEFVVVQLGSAGAERWRDVVADALMSIEGVGCVYERSDIDAREREGLSARTGVLRGDTPPAETIIGERIDGRAYRFAVGFTEGQKTGFYLDQRHARAAIARVAAGRRVLNAFSYTGAFSVIAAANGAASVTSLDSSGPALVGARRNAEINDVEVGEQIEGDAFAELRTLRDRARSYDLILLDPPKLAQTEAQVDRAARAYKDLNLLAAKLLAPGGILMTFSCSGGMSPDLFQKVVAGAALDARRNLRIIGRLDQPGDHPVPLSFPEAAYLKGLVLEAE 396          
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A539E675_9ACTN (SAM-dependent methyltransferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E675_9ACTN)

HSP 1 Score: 464 bits (1193), Expect = 3.620e-160
Identity = 248/372 (66.67%), Postives = 285/372 (76.61%), Query Frame = 1
Query:  103 VSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADT--------VVDDDLIVARVRAASERRSRLLARRTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAILTAD 1194
            + G+P PG TV V +  G  LG  A+SP SQIR RMWTF ADT         VD   +  R+  ++ RR+ LLA  TD+AR+VFSEAD +PG+IADRYGDTVV Q T+AGAD W   + DAL +L G+ +VYERSD D+R+REGLE  VG LRG  P  D++  E  +RFA+DV +GHKTGFYLDQR+AR E+   A GA VLNVFSYTGAFSVIAA SGA S+LSIDSSGPAL  A+RNAVLN VD+GEL EADAFTALRGLRDR R YDLI LDPPKLAN+E Q+DKA+RAYKDLNLLA+KLLA  G LLTFSCS AMT +LFQKV+AGAALDA R VRIV RL QP DHPVPL FPEAEYLKG IL A+
Sbjct:    1 MHGSPGPGATVEVHSATGDHLGLGAFSPESQIRVRMWTFAADTDASTSTSSTVDAAFVTDRIVRSASRRAALLASGTDAARLVFSEADGVPGLIADRYGDTVVCQFTTAGADRWRDVIADALFALDGVRSVYERSDADVRQREGLEPVVGHLRGDEPPGDIIIHEGRWRFAIDVTNGHKTGFYLDQRNARGEIELLASGARVLNVFSYTGAFSVIAAGSGAASVLSIDSSGPALAAAERNAVLNGVDVGELMEADAFTALRGLRDRARQYDLIALDPPKLANTEKQVDKAARAYKDLNLLAIKLLAGGGRLLTFSCSAAMTTELFQKVVAGAALDAGRTVRIVGRLAQPGDHPVPLNFPEAEYLKGLILQAE 372          
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A7K1CAU9_9ACTN (Methyltransferase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1CAU9_9ACTN)

HSP 1 Score: 427 bits (1099), Expect = 1.390e-145
Identity = 226/393 (57.51%), Postives = 282/393 (71.76%), Query Frame = 1
Query:    7 VSPVNARLVLRPNRERSLKRHHPWVFSGGVAHVSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLARRTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAIL 1185
             S   + L L+ +RE  +KR HPWV SG V+HV+ +P PG+TVLV +  G  LG A+YSP S IRARMW+FD  TVVD+  +   V  + ERR       + +AR+VF +AD LPG++ DRYGD VV+Q T+ G + W   V D L +LPG+  VYERSDGD R REGL+ RVG+ RG  P  ++ A E+GF FAVDV SGHKTGFY+DQR+AR  + + A GA VLNVF YTG+FSVIA  SGA S+ +IDSS P+LE  + NA LN  D GEL   DA   LR +RDR  ++DLIILDPPK A ++  LD+ASRAYKD+NLL  KLLAP G LLTFSCSGA+++DLFQK++AGAALDAKR++ IV RL QP DHPV L +PE+EYLKG +L
Sbjct:    2 TSRPTSTLYLKADREGPVKRRHPWVMSGSVSHVTNDPQPGDTVLVVSASGDELGVASYSPFSTIRARMWSFDPTTVVDESFVGNLVTTSVERREWYPGLES-TARLVFGDADGLPGLVVDRYGDVVVMQITAVGVEKWRDVVADLLFALPGVNCVYERSDGDDRTREGLDERVGVARGTLPA-EVFARENGFTFAVDVESGHKTGFYIDQRNARTLIPQLAVGARVLNVFGYTGSFSVIANRSGAESVTTIDSSAPSLELTRLNARLNDTDPGELIVGDAGEQLRRMRDRRAEFDLIILDPPKFAPTQKNLDRASRAYKDVNLLGAKLLAPGGRLLTFSCSGAVSIDLFQKIVAGAALDAKRSLSIVQRLGQPVDHPVLLSYPESEYLKGLLL 392          
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A524BAF1_9ACTN (23S rRNA (Cytosine(1962)-C(5))-methyltransferase RlmI n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524BAF1_9ACTN)

HSP 1 Score: 423 bits (1087), Expect = 4.140e-144
Identity = 223/368 (60.60%), Postives = 265/368 (72.01%), Query Frame = 1
Query:   82 FSGGVAHVSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLARRTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAIL 1185
             SG V  V+G+P PG+TVLV  D   P+  A+YSP S IRAR+WTFD +  +DDD +  RV AA+ERR RL     D+ R+VF EAD LPG++ DRYG  VV Q T+ G DA    VV ALASL G+  VYERSDGD R REGLE R G+  G  P  D+ A E   RF VDV  GHKTGFY+DQR +R  V+  +R  +VLNVF YTG+FSV AA  GA S+ +IDSSGPAL  A+ NA  N VDIG+L EADAFT LR LRDR   +DLI+LDPPKLAN+  Q+D+A+RAYKDLNLLA+KLL P G L T+SCSGA++ DLFQKV+AGAA+DA R   IV RL QPSDHP+PL FPEAEYLKG I+
Sbjct:    1 MSGSVDRVTGDPQPGDTVLVIDDANRPVALASYSPHSSIRARVWTFDIEQSIDDDFVANRVAAAAERRHRLGIANGDAVRLVFGEADGLPGLVVDRYGPVVVFQITTVGVDARRDAVVSALASLDGVECVYERSDGDNRSREGLEPRTGVRHGSLPA-DVWAREGDLRFHVDVEHGHKTGFYIDQRDSRRLVARHSRDRAVLNVFGYTGSFSVAAARGGAASITTIDSSGPALRLAEANARANNVDIGDLVEADAFTELRSLRDRRASFDLIVLDPPKLANNPNQVDRATRAYKDLNLLALKLLRPGGLLFTYSCSGAVSSDLFQKVVAGAAVDANREAHIVGRLGQPSDHPIPLHFPEAEYLKGLIV 367          
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A6I3ASK8_9ACTN (Methyltransferase n=7 Tax=root TaxID=1 RepID=A0A6I3ASK8_9ACTN)

HSP 1 Score: 412 bits (1059), Expect = 1.610e-139
Identity = 214/387 (55.30%), Postives = 266/387 (68.73%), Query Frame = 1
Query:   34 LRPNRERSLKRHHPWVFSGGVAHVSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLARRTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAILTAD 1194
            L P ++RSL+R HPWVF+G V  V G  + G+TV V A DGT L   AYSP SQI  R+W+F    V+D +    RVR A+  RS L A RT +AR+VF+E+D LPGVI DRYG   V++ T  GAD W   + DA  SL G+ +VYERSD ++R+REGL  R GLLRG  P   +   E G  + VDVRSGHKTGFYLDQR +R  V   ARG  VLNVF+YTGAFSV A   GA  + ++DSSGPAL  A  N   N +  G L EADAFT LR LRD G  +DL+ILDPPKL +++AQ+++ +RAYKDLN LA +LL+P G LLTFSCSG++T +L QK++A AALDA R+ ++V RLHQ SDHPV L FPEA+YLKG +    
Sbjct:    8 LHPGKDRSLRRWHPWVFAGAVESVRGAASAGDTVRVVASDGTFLAWGAYSPDSQIAVRIWSFMEQDVIDAEFFADRVRRAAASRSDL-AGRTTAARLVFAESDHLPGVIVDRYGSVAVMELTWVGADRWRDAIADACLSLDGVTSVYERSDVEVRQREGLAERTGLLRGVEPPERVEVSEDGATYLVDVRSGHKTGFYLDQRESRSTVRALARGQKVLNVFAYTGAFSVAAWQGGASKVTTVDSSGPALRIAAENLAANGLPTGSLVEADAFTELRRLRDAGSTFDLVILDPPKLVHNKAQVERGARAYKDLNWLAFRLLSPGGMLLTFSCSGSVTPELHQKIVADAALDAARDAQVVGRLHQASDHPVLLSFPEAQYLKGLVCRVS 393          
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Match: A0A4P5RT47_9ACTN (Ribosomal RNA large subunit methyltransferase I n=6 Tax=root TaxID=1 RepID=A0A4P5RT47_9ACTN)

HSP 1 Score: 411 bits (1057), Expect = 3.700e-139
Identity = 208/391 (53.20%), Postives = 273/391 (69.82%), Query Frame = 1
Query:   22 ARLVLRPNRERSLKRHHPWVFSGGVAHVSGNPAPGETVLVCADDGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLARRTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALASLPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDVRSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSLLSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLIILDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDLFQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAILTAD 1194
            A + L+P R+RS+KR HPW+ SG +A V G+P PG+TV + A  G  L +A+YSP S +RAR+W+FD    ++   I   + ++   R+   +    + R++F +AD LPG++ DRYG+ VV+Q T+ G + W   VV  L ++ G+  VYERSDG  REREGL  R+GL  G  P   + A E   ++ V+V  GHKTGFY+DQR +R      +RGA VLNVF YTG+FS++A  +GA S+ +++SSGPALE A++N  LN VDIGEL E DAF  LR +RDR  ++DLIILDPPK A S A L++A+R YKD+NLL  KLLA  G L+TFSCSGAMT DLFQKV+AGAALDAKR +RIV RL QP DHPVPL FP++EYLKG +L AD
Sbjct:    9 ATVHLKPERDRSMKRLHPWILSGAIARVEGDPQPGDTVRIIAAGGAELATASYSPFSALRARVWSFDPSVEINAGFITGLINSSVALRA-AHSEFAHTCRLIFGDADGLPGLVVDRYGEVVVMQITTVGIERWRDAVVSTLMTIDGVTCVYERSDGADREREGLTNRIGLAAGTLPST-IYAVEGNEKYNVNVEEGHKTGFYIDQRDSRALAGRLSRGARVLNVFGYTGSFSIVAQRNGAASVTTVESSGPALEIARQNGELNGVDIGELIEGDAFEVLRRMRDRRAEFDLIILDPPKYATSTAHLERATRKYKDINLLGAKLLAKGGHLMTFSCSGAMTADLFQKVVAGAALDAKRKMRIVQRLGQPIDHPVPLTFPDSEYLKGLLLQAD 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7927.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1LA74_9ACTN7.310e-19773.4323S rRNA (Cytosine(1962)-C(5))-methyltransferase R... [more]
A0A3C2AZF8_9ACTN5.030e-19472.8423S rRNA (Cytosine(1962)-C(5))-methyltransferase R... [more]
A0A7K1BBA6_9ACTN6.450e-18268.8923S rRNA (Cytosine(1962)-C(5))-methyltransferase R... [more]
A0A6I3F094_9ACTN6.640e-18269.64Methyltransferase n=5 Tax=root TaxID=1 RepID=A0A6I... [more]
A0A6I3WTD1_9ACTN3.520e-16662.60Methyltransferase n=2 Tax=root TaxID=1 RepID=A0A6I... [more]
A0A539E675_9ACTN3.620e-16066.67SAM-dependent methyltransferase n=1 Tax=Acidimicro... [more]
A0A7K1CAU9_9ACTN1.390e-14557.51Methyltransferase (Fragment) n=1 Tax=Actinomycetia... [more]
A0A524BAF1_9ACTN4.140e-14460.6023S rRNA (Cytosine(1962)-C(5))-methyltransferase R... [more]
A0A6I3ASK8_9ACTN1.610e-13955.30Methyltransferase n=7 Tax=root TaxID=1 RepID=A0A6I... [more]
A0A4P5RT47_9ACTN3.700e-13953.20Ribosomal RNA large subunit methyltransferase I n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7927contigP-wetherbeei_contig7927:893..2089 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog159087.Daro_0196
PFAMsMethyltrans_SAM
Model size1197
Max annot lvl206389|Rhodocyclales
KEGG koko:K06969
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.87e-135
EggNOG OGsCOG1092@1|root,COG1092@2|Bacteria,1MUGB@1224|Proteobacteria,2VKNG@28216|Betaproteobacteria,2KUS1@206389|Rhodocyclales
EC2.1.1.191
DescriptionPutative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Cds size1197
COG categoryJ
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187009.5010743-CDS-P-wetherbeei_contig7927:892..20891683187009.5010743-CDS-P-wetherbeei_contig7927:892..2089Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7927 893..2089 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7927.2.1prot_P-wetherbeei_contig7927.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7927 893..2089 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7927.2.1

>prot_P-wetherbeei_contig7927.2.1 ID=prot_P-wetherbeei_contig7927.2.1|Name=mRNA_P-wetherbeei_contig7927.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=399bp
NTVSPVNARLVLRPNRERSLKRHHPWVFSGGVAHVSGNPAPGETVLVCAD
DGTPLGSAAYSPSSQIRARMWTFDADTVVDDDLIVARVRAASERRSRLLA
RRTDSARIVFSEADELPGVIADRYGDTVVVQSTSAGADAWMPTVVDALAS
LPGIATVYERSDGDIREREGLERRVGLLRGPAPRPDLVACEHGFRFAVDV
RSGHKTGFYLDQRHARHEVSERARGASVLNVFSYTGAFSVIAAASGARSL
LSIDSSGPALETAKRNAVLNAVDIGELQEADAFTALRGLRDRGRDYDLII
LDPPKLANSEAQLDKASRAYKDLNLLAMKLLAPHGTLLTFSCSGAMTMDL
FQKVLAGAALDAKRNVRIVDRLHQPSDHPVPLWFPEAEYLKGAILTAD*
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mRNA from alignment at P-wetherbeei_contig7927:893..2089+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7927.2.1 ID=mRNA_P-wetherbeei_contig7927.2.1|Name=mRNA_P-wetherbeei_contig7927.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1197bp|location=Sequence derived from alignment at P-wetherbeei_contig7927:893..2089+ (Phaeothamnion wetherbeei SAG_119_79)
AATACGGTGTCGCCCGTGAACGCCCGGCTGGTGCTGCGACCGAACCGCGA ACGCTCGCTGAAGCGACACCACCCGTGGGTGTTCAGCGGCGGTGTCGCCC ACGTCAGCGGCAACCCCGCGCCCGGCGAGACCGTGCTGGTGTGTGCCGAC GACGGCACGCCACTCGGCTCCGCTGCGTACAGCCCGTCGTCGCAGATCCG GGCGCGCATGTGGACGTTCGATGCCGACACGGTGGTTGACGACGACCTCA TCGTCGCTCGCGTCCGCGCCGCATCCGAGCGTCGCTCGCGTCTGCTGGCT CGGCGAACCGACAGCGCTCGCATCGTGTTCAGCGAGGCCGACGAGCTGCC CGGCGTGATCGCCGACCGCTACGGCGACACCGTCGTCGTGCAGAGCACCA GCGCCGGCGCCGACGCGTGGATGCCGACGGTCGTCGACGCGCTCGCCTCG TTGCCCGGCATCGCCACCGTCTACGAACGAAGCGACGGCGACATCCGCGA GCGCGAGGGCCTCGAGCGTCGCGTCGGTCTGCTGCGCGGGCCCGCCCCGC GGCCGGACCTCGTCGCCTGCGAGCACGGCTTCCGCTTCGCCGTCGACGTG CGCAGCGGTCACAAGACCGGCTTCTACCTCGACCAGCGCCACGCCCGTCA CGAGGTGTCGGAACGGGCTCGCGGCGCGAGCGTGCTCAACGTGTTCTCGT ACACCGGAGCGTTCAGCGTGATCGCCGCCGCCTCGGGTGCGCGTTCGTTG CTGAGCATCGACTCGTCCGGCCCTGCGCTGGAGACGGCCAAGCGCAACGC GGTGCTCAACGCGGTCGACATCGGCGAGCTGCAGGAGGCCGACGCGTTCA CCGCGCTTCGCGGCCTGCGCGATCGCGGGCGCGACTACGACCTGATCATC CTCGACCCGCCGAAGCTGGCCAACAGCGAGGCGCAGCTCGACAAGGCGTC ACGCGCCTACAAGGACCTCAACCTGCTGGCGATGAAGCTGCTCGCCCCGC ATGGCACGCTGCTGACGTTCTCGTGCAGCGGGGCGATGACCATGGACCTC TTCCAGAAGGTGCTCGCCGGCGCAGCGCTGGACGCCAAGCGCAACGTGCG CATCGTCGATCGGCTGCACCAGCCGAGCGATCACCCCGTCCCCCTCTGGT TCCCGGAGGCGGAGTACCTCAAAGGCGCGATCCTCACTGCGGATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7927:893..2089+

>mRNA_P-wetherbeei_contig7927.2.1 ID=mRNA_P-wetherbeei_contig7927.2.1|Name=mRNA_P-wetherbeei_contig7927.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1197bp|location=Sequence derived from alignment at P-wetherbeei_contig7927:893..2089+ (Phaeothamnion wetherbeei SAG_119_79)
AATACGGTGTCGCCCGTGAACGCCCGGCTGGTGCTGCGACCGAACCGCGA
ACGCTCGCTGAAGCGACACCACCCGTGGGTGTTCAGCGGCGGTGTCGCCC
ACGTCAGCGGCAACCCCGCGCCCGGCGAGACCGTGCTGGTGTGTGCCGAC
GACGGCACGCCACTCGGCTCCGCTGCGTACAGCCCGTCGTCGCAGATCCG
GGCGCGCATGTGGACGTTCGATGCCGACACGGTGGTTGACGACGACCTCA
TCGTCGCTCGCGTCCGCGCCGCATCCGAGCGTCGCTCGCGTCTGCTGGCT
CGGCGAACCGACAGCGCTCGCATCGTGTTCAGCGAGGCCGACGAGCTGCC
CGGCGTGATCGCCGACCGCTACGGCGACACCGTCGTCGTGCAGAGCACCA
GCGCCGGCGCCGACGCGTGGATGCCGACGGTCGTCGACGCGCTCGCCTCG
TTGCCCGGCATCGCCACCGTCTACGAACGAAGCGACGGCGACATCCGCGA
GCGCGAGGGCCTCGAGCGTCGCGTCGGTCTGCTGCGCGGGCCCGCCCCGC
GGCCGGACCTCGTCGCCTGCGAGCACGGCTTCCGCTTCGCCGTCGACGTG
CGCAGCGGTCACAAGACCGGCTTCTACCTCGACCAGCGCCACGCCCGTCA
CGAGGTGTCGGAACGGGCTCGCGGCGCGAGCGTGCTCAACGTGTTCTCGT
ACACCGGAGCGTTCAGCGTGATCGCCGCCGCCTCGGGTGCGCGTTCGTTG
CTGAGCATCGACTCGTCCGGCCCTGCGCTGGAGACGGCCAAGCGCAACGC
GGTGCTCAACGCGGTCGACATCGGCGAGCTGCAGGAGGCCGACGCGTTCA
CCGCGCTTCGCGGCCTGCGCGATCGCGGGCGCGACTACGACCTGATCATC
CTCGACCCGCCGAAGCTGGCCAACAGCGAGGCGCAGCTCGACAAGGCGTC
ACGCGCCTACAAGGACCTCAACCTGCTGGCGATGAAGCTGCTCGCCCCGC
ATGGCACGCTGCTGACGTTCTCGTGCAGCGGGGCGATGACCATGGACCTC
TTCCAGAAGGTGCTCGCCGGCGCAGCGCTGGACGCCAAGCGCAACGTGCG
CATCGTCGATCGGCTGCACCAGCCGAGCGATCACCCCGTCCCCCTCTGGT
TCCCGGAGGCGGAGTACCTCAAAGGCGCGATCCTCACTGCGGATTGA
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