mRNA_P-wetherbeei_contig7918.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: A0A7S0IM84_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0IM84_MICPS) HSP 1 Score: 107 bits (267), Expect = 5.410e-22 Identity = 112/342 (32.75%), Postives = 155/342 (45.32%), Query Frame = 1
Query: 25 FDLVAFQREVLRLRLPTQDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRS--INSAVLVQQLRD-AGGGRDHTGGHXXXXXXXXXXXXXXXXXAGEAQL---VDVFVFSVGGAA----------PAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSALVPHARLGQLHEDVVYRTHAARALAASAQLTSAAARQLSAVPAGP-ANAWLADAAMDTYA-----TRIRGTVREVWRQRRDVADCVARMAFADALPKLEPLLERSRAALALAEA 984
FD+ F E+ L LP Q +VT ++ A D L+AA AA A G K V R+ ++SA + QL+ AGG R +GG AG+ + + VFV A P IDG + + P +V+ QSA +P+ CDG +N R+P VAAVAE VGG +PSHL R+ DW+W++ +P SA +RL +LH D V+R++A A+ ASA +A L A P A W + D A R+ V E W +AD V R+ FADA E L R+ L L++A
Sbjct: 686 FDVDGFHDELRGLMLPDQRVTVTTQRLNAADDPALAAALLAATRSGTSPALDPVSG-KVVARKVHWLDSAEVHAQLKVLAGGARRKSGGEKD---------------AGKKSVALEIPVFVVEADATAGTTDADDDPTPLLIDGE-RVAVSLPDMVLVAQSASRSWASPVGCDGGDARWNLRDPTDAAVAAVAEHVGGALPSHLGYNRARRAVEHDWLWSVGNNPFSATARGSRLAELHRDWVHRSYALAAIDASAAKVNAGVAALG--RASPCAEGWESLQRWDAPAHPASLARVHRGVAESWMA---IADAVGRLNFADAARMGEELERRADDFLRLSDA 1005
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: A0A6T6UCP6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A6T6UCP6_9CRYP) HSP 1 Score: 103 bits (257), Expect = 1.020e-20 Identity = 75/245 (30.61%), Postives = 121/245 (49.39%), Query Frame = 1
Query: 25 FDLVAFQREVLRLRLPTQDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRSINSAVLVQQLRDAGGGRDHTGGHXXXXXXXXXXXXXXXXXAGEAQLVDVFVFSVGGAAPAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSALVPHA-RLGQLHEDVVYRTHAARALAASAQLTS 756
FD AF+ ++ +LRLP Q +H +A D L+ A+ A+ + G + R ++S VL + L+ DH + + + +F+FS+ P +ID H+QARA P +V+AVQS L E+ +SC+G PV +N R+PLR V+AA A+ + G++P H+ + QDW+W++ SPL+ HA +H D +R + +LA S L +
Sbjct: 515 FDYAAFKAKLDQLRLPRQQFHFVLHQYSMAEDQALAVAYANALRSSMVATLKVDGRFVATKRMYLDSQVLSRHLQLL---HDHL---------MESDSDIQDPTVVDRRDIPIFLFSLDFPLPVFIDKHYQARAL-PDMVLAVQSDELAWESHISCNGAPVVWNLRSPLRQVLAATAQHLAGVLPMHVAWDEAHGKVSQDWLWSVGCSPLTHTSLHAANFSAVHADASHRNYIVDSLAESVALVN 746
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: L8H8C0_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8C0_ACACA) HSP 1 Score: 103 bits (256), Expect = 1.480e-20 Identity = 76/288 (26.39%), Postives = 133/288 (46.18%), Query Frame = 1
Query: 25 FDLVAFQREVLRLRLPTQDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRSINSAVLVQQLR----------------------------DAGGGRDHTGGHXXXXXXXXXXXXXXXXXAGE-AQLVDVFVFSVGGAAPAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSALVPHARLGQLHEDVVYRTHAARALAASAQLTSAAARQLSAVPAGPAN 801
FD F+ E+++ +LP Q+ + ++D++SD L+ AF ++ + + G + T R ++S L QL D DH G + G+ ++ + VF FS+ P +ID ++QA+A + +V+AVQS + L+C+ +P+ ++ R+PL+P++AA A GGL+P H+T QDW+W++ +SPL+ H R L D+ YR+ A+ S + +A + LS + AN
Sbjct: 661 FDFEQFKAEMIKFKLPNQEFAFVFKELDMSSDKELTMAFTHSLRTGVMPTLSVDGTFAAQTIRYLDSMDLQHQLHLLNIHSHADEELEKVVPKDGKVSTAPTHDDESDDDHEGDNRLPDEVFGATALPERSGKGQTSRHIPVFFFSLNDVVPVFIDKYYQAKALS-NVVLAVQSQHFNWTSKLACNDKPIRWDLRDPLKPLLAATALHYGGLVPMHITYDEPNQCAAQDWLWSVGDSPLAHTSQHHRFSLLQRDLAYRSFVTNAIEDSIKSLNAGIKTLSKLRTTKAN 947
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: D8RDT6_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RDT6_SELML) HSP 1 Score: 90.5 bits (223), Expect = 2.660e-16 Identity = 82/311 (26.37%), Postives = 134/311 (43.09%), Query Frame = 1
Query: 25 FDLVAFQREVLRLRLPTQDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRSINSAVLVQQLRDAGGGRDHTGGHXXXXXXXXXXXXXXXXXAGEAQLVDVFVFSVGGAAPAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSALVPHARLGQLHEDVVYRTHAARALAASAQLTSAAARQLSAVPAGPANAWLADAAMDTYATRIRGTVREVWRQRRDVADCVARMAFADALPKLEPLLERS 957
D+ + + LRLP+Q VH + L+ D L+ AF+ A I G TR ++S +L QL+ +G + V VF F + +ID H+ A+A P +V+ +QSA + L C+G+ + ++ +P++ VAAVAE + GL+P+HLT + +DW W+ P S + LH D + R++ AL S Q +A +LS P + +M+ + +V +WRQ ++ V + F DA+ L L S
Sbjct: 553 LDISQVKDAISTLRLPSQTFQYNVHLIGLSEDPALAMAFSVARRAAVIPVLQMNGAHSQSTRNYLDSIILQHQLQQLTARSPRSGSTVLTFFSLDSLGLLFSVPKSTLE-VPVFWF-IRSDESVFIDKHYLAKAL-PDMVIVMQSAQSSWPSHLQCNGKSIDWDASSPIKAAVAAVAEHLSGLMPTHLTYSHAHDNADEDWTWSAGNHPFSGTSSGYTISSLHTDAIARSYIVSALDESVQEMNAVFERLSKEPTHE-RVFRPFKSMERQLLQEYNSVVGIWRQ---ISINVGKAKFDDAVRSLSSLRHAS 856
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: UPI001F5CEDC1 (uncharacterized protein LOC124702177 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CEDC1) HSP 1 Score: 89.7 bits (221), Expect = 4.890e-16 Identity = 67/238 (28.15%), Postives = 116/238 (48.74%), Query Frame = 1
Query: 61 LRLPTQDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRSINSAVLVQQLRDAGGGRDHTGGHXXXXXXXXXXXXXXXXXAGEAQLVDVFVFSVGGAAPAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSALVPHARLGQLHEDVVYRTHAARALAASAQLTSAAARQL 774
L L +Q + T H + L+ D L AF+ A A+ G +S R ++SA+L QL+ G G H + ++V +F + P +D H+QA+A + +V+ VQS E+ L C+G+ + ++ R P++ +AA AE V GL+PSHL + T +DW W++ +PLS +L + +DV+ R + A+ S ++ ++A ++L
Sbjct: 618 LLLRSQKSMFTQHMLSLSEDPALMMAFSMACRAAAVPLLLVNGTYRSTVRAYLDSAILQHQLQKLSGQTSLKGEH-----------------SNHRSTLEVPIFWFIHSDPLILDKHYQAKALS-NMVIVVQSDVDSWESHLQCNGKSILWDLRKPVKAAIAASAEYVSGLLPSHLVYSTAHETAFEDWTWSVGCNPLSVSSEGWQLSEFQQDVIARNYIITAVEESIRVVNSAIQRL 837
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: A0A835FCZ0_9POAL (Uncharacterized protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835FCZ0_9POAL) HSP 1 Score: 89.0 bits (219), Expect = 5.010e-16 Identity = 66/233 (28.33%), Postives = 112/233 (48.07%), Query Frame = 1
Query: 76 QDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRSINSAVLVQQLRDAGGGRDHTGGHXXXXXXXXXXXXXXXXXAGEAQLVDVFVFSVGGAAPAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSALVPHARLGQLHEDVVYRTHAARALAASAQLTSAAARQL 774
Q + + H + L+ + L AF+ A A+ G KS ++SA+L QL+ GGH + ++V +F + P +D H+QA+A + +VV VQS E+ L C+GRP+ ++ R P++ +AA AE + GL+PSHL + T +DW W++ +PLS +L + +DV+ R + ++ S Q ++A +QL
Sbjct: 122 QKSMFSQHLLSLSEEPALMMAFSMARRAAAVPLLLVNGTYKSTVNTYLDSAILQHQLQKLSEHNSLRGGH-----------------SNHRSTLEVPIFWFIHSEPLLLDKHYQAKALS-NMVVVVQSDDDSWESHLQCNGRPILWDLRKPVKAAIAASAEYISGLLPSHLVYSHAHETAVEDWTWSVGCNPLSLTSNGWQLSEFQQDVIGRNYIITSVEESIQTVNSAIQQL 336
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: UPI000DF4DBA0 (uncharacterized protein LOC112881624 isoform X3 n=1 Tax=Panicum hallii TaxID=206008 RepID=UPI000DF4DBA0) HSP 1 Score: 88.2 bits (217), Expect = 1.470e-15 Identity = 65/233 (27.90%), Postives = 112/233 (48.07%), Query Frame = 1
Query: 76 QDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRSINSAVLVQQLRDAGGGRDHTGGHXXXXXXXXXXXXXXXXXAGEAQLVDVFVFSVGGAAPAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSALVPHARLGQLHEDVVYRTHAARALAASAQLTSAAARQL 774
Q + + H + L+ + L AF+ A A+ G KS ++SAVL QL+ GGH + ++V +F + P +D H+QA+A + +VV VQS E+ L C+GRP+ ++ R P++ +A AE + GL+PSHL + T +DW W++ +PLS +L + +DV+ R + ++ S Q+ ++A ++L
Sbjct: 435 QKSMFSQHLLSLSDEPALMMAFSMARRTAAVPLLLVNGTYKSTVSTYLDSAVLQHQLQRLSEHNSLKGGH-----------------SNHRSTLEVPIFWFVHSEPLLLDKHYQAKALS-NMVVVVQSDDDSWESHLQCNGRPILWDLRKPVKAAIATTAEYISGLLPSHLVYSHAHETAVEDWTWSVGCNPLSITSHGWQLSEFQQDVIGRNYIITSVEESIQIVNSAIQRL 649
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: A0A388KD42_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KD42_CHABU) HSP 1 Score: 88.2 bits (217), Expect = 1.680e-15 Identity = 70/232 (30.17%), Postives = 111/232 (47.84%), Query Frame = 1
Query: 22 AFDLVAFQREVLRLRLPTQDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRSINSAVLVQQLRDAGGGRDHTGGHXXXXXXXXXXXXXXXXXAGEAQLVDVFVFSVGGAAPAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSALVPHARLGQLHEDVVYRTH 717
AF + F+REV +LR+P+Q+ H + +A D L AF +++ A+ G + I+S L QL+ G D T G + V +FVFS+ +P ID + A++ +V+ VQS + + C+ +H + RNPL+ VAAVAE + G++PSH T S G QDW+WA+ L+A +L Q+H + +R +
Sbjct: 770 AFLVDDFKREVTKLRVPSQEFRFIFHKLGVAEDTALGVAFTSSIRMSAVPLLGTNGFFEPSQVSFIDSLTLQHQLQRLAG-IDDTDGSGKGGPGGGSSYFSFWNLRDKLD-VPIFVFSLH-RSPLLIDKQYTAKSLN-NMVLVVQSDEPDWASNMQCNRERMHVDLRNPLKSAVAAVAEHLTGVLPSHQTFSHSHGKGTQDWMWAVGSHALAATSRGWKLSQIHVEAGWRNY 997
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: A0A388L357_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L357_CHABU) HSP 1 Score: 87.8 bits (216), Expect = 2.190e-15 Identity = 71/234 (30.34%), Postives = 106/234 (45.30%), Query Frame = 1
Query: 22 AFDLVAFQREVLRLRLPTQDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRSINSAVLVQQLRDAGGGRDHTGGHXXXXXXXXXXXXXXXXXAGEAQL-VDVFVFSVGGAAPAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSAL-VPHARLGQLHEDVVYRTH 717
AF + F+ EV++L+ QD H + +A D L AF +++ A+ T+ G V R I+S L QL G G QL V +F+FS+ P ID A++ +V+ VQS + + C+ +H N RNPL+ VAAVAE + G++PSH + + +DW+WA+ LSA V RL Q H D +R +
Sbjct: 658 AFAIDDFKHEVMKLKTSRQDFRFFQHRLGVADDIALGVAFTSSMRKAAVPYITSHGHFWPVQRNYIDSLTLQHQLEKIG---------------EDGISSVSSINWGYGQLNVPIFIFSLHAHPPILIDKELTAKSIG-NMVLVVQSDEPTWGSHVQCNQESLHLNLRNPLKSAVAAVAEHLTGILPSHRSFSHAHGKAAEDWMWAVGAHALSATSVRGWRLSQFHVDAAWRNY 875
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Match: A0A0Q3JM56_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3JM56_BRADI) HSP 1 Score: 87.4 bits (215), Expect = 2.220e-15 Identity = 69/238 (28.99%), Postives = 115/238 (48.32%), Query Frame = 1
Query: 61 LRLPTQDASVTVHDVDLASDATLSAAFNAAVCDVAITAATAGGGVKSVTRRSINSAVLVQQLRDAGGGRDHTGGHXXXXXXXXXXXXXXXXXAGEAQLVDVFVFSVGGAAPAYIDGHWQARAAAPGLVVAVQSAPLQAEAPLSCDGRPVHFNPRNPLRPVVAAVAELVGGLIPSHLTPCRSGATGRQDWIWAISESPLSALVPHARLGQLHEDVVYRTHAARALAASAQLTSAAARQL 774
L L +Q + + H + L+ + L AF+ A A+ G +S R ++SA+L QL+ G H + ++V VF + P +D H+QA+A + +VV VQS E+ L C+GR + ++ R P++ +AA AE V GL+PSHL + T +DW W++ +PLS RL + +DV+ R + A+ S Q+ ++A ++L
Sbjct: 223 LLLRSQKSMFSQHMLSLSEEPALMMAFSMARRAAAVPLLLVNGTYRSTVRTYLDSAILQHQLQRLSERGSLKGEH-----------------SNHRSTLEVPVFWFIHSEPLLLDKHYQAKALS-NMVVVVQSDANSWESHLQCNGRSILWDLRKPVKAAIAASAEYVAGLLPSHLVYSSAHETAFEDWTWSVGCNPLSINSKGWRLSEFQQDVIARNYIITAVEESIQVVNSAIQRL 442 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7918.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7918.2.1 >prot_P-wetherbeei_contig7918.2.1 ID=prot_P-wetherbeei_contig7918.2.1|Name=mRNA_P-wetherbeei_contig7918.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=328bp GGGGNGGAFDLVAFQREVLRLRLPTQDASVTVHDVDLASDATLSAAFNAAback to top mRNA from alignment at P-wetherbeei_contig7918:405..1442- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7918.2.1 ID=mRNA_P-wetherbeei_contig7918.2.1|Name=mRNA_P-wetherbeei_contig7918.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1038bp|location=Sequence derived from alignment at P-wetherbeei_contig7918:405..1442- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7918:405..1442- >mRNA_P-wetherbeei_contig7918.2.1 ID=mRNA_P-wetherbeei_contig7918.2.1|Name=mRNA_P-wetherbeei_contig7918.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig7918:405..1442- (Phaeothamnion wetherbeei SAG_119_79)back to top |