mRNA_P-wetherbeei_contig7894.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: A0A8J2WRK2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WRK2_9STRA) HSP 1 Score: 161 bits (407), Expect = 5.060e-40 Identity = 147/354 (41.53%), Postives = 201/354 (56.78%), Query Frame = 1
Query: 28 APARSSLSRLRAAEEKRRCLDAAATVGFEELLVQIADDMEAAVLRASDDIRQRLSAVDARIAAALADLDNDEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRRREDWRRLRHDAALRDFAADAASEQFADPPERRVLFASFRAQQ---DERQTRRLAVLGAL-MPSGSLSSSLEEASVAAVLAVFKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHEIHRYAALAPAPDLPAHAAALAAATADPAQEETFRKSGGLRQELKAL 1077
+P R+ +L A +R AA F E L I+D +E V ASD + L AVD + AA +L+ DE L +D + + E ++G L +R + DF A LE +E +RA AG L LV L+ IA + P EIER+ E A E+NAV+I NR +HA LLA +E+ V A+ W RRE WR+LRHD A+++F D S+QF +PPER F RA Q DE++ + + + A+ +P + +S + FK + XXXXXXXXXXXXXXXXXXXXXXX R E+HRY ALA P+L A A+ + DP +E+ FR +GGL+ EL+ L
Sbjct: 81 SPVRTEFPKLAARLLAKREAHDAAIQSFAEKLTLISDGIEIDVKTASDGVVDALEAVDQQTAAIFEELNRDELLVTKDASYLTETWEAIEGTLKDRHAVIRDFGARLEGLEQQRAKTAGGELRNLVDTLLRIAFKSPGEIERVVEGDAFELNAVIIANRKSHAELLALLEKKDVGVGLDAIEKWRLRREAWRQLRHDRAVKEFWEDLESQQFVNPPERSKRFEKIRADQLSSDEQRRKLIREVEAMTLPQSAKASEAK--------TKFKEIHXXXXXXXXXXXXXXXXXXXXXXXAALLRREDLRRELHRYGALAEEPELHEFADAVESIALDPEREDFFRSAGGLKPELRQL 426
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: D7FNW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW1_ECTSI) HSP 1 Score: 150 bits (379), Expect = 2.620e-36 Identity = 130/374 (34.76%), Postives = 169/374 (45.19%), Query Frame = 1
Query: 1 VRMLSHQPRAPA--RSSLSRLRAAEEKRRCLDAAATVGFEELLVQIADDMEAAVLRASDDIRQRLSAVDARIAAALADLDNDEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRRREDWRRLRHDAALRDFAADAASEQFADPPERRVLFASFRAQQDERQTRRLAVLGALMPSGSLSSS-------------LEEASVAAVLAVFKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHEIHRYAALAPAPDLPAHAAALAAATADPAQEETFRKSGGLRQELKAL 1077
VR L HQP P+ RS +LR + +RR DA A FE + I++DME VL AS +R L + +A A+L D+ L D V L+ RS + +F LE VE R+ G L LV ++ IA R+P+EIER++EE A E+N V+I NR AHA LL ME+ A W+ RREDWRRLRHD AL F AD + F +PPER LF F+ Q R R+A+L L + SS L +V V + L R E+H Y A PDL A + A E+ RK+GGL+ EL AL
Sbjct: 115 VRTLHHQPLDPSQPRSGFEKLRKKQAERRERDARAIETFEAGVSAISEDMEQRVLEASYALRDGLEEAEEAVATIRAELGADDQLVQGDMAYVEEIWSKLEAQCNRRSSRIQEFREGLERVEILRSEAVGGELRRLVDDMIAIAFRMPDEIERIAEEHAHELNGVLISNRLAHAELLGTMEKRDFSFAVGIRRVWETRREDWRRLRHDRALVHFHADLTAPNFTNPPERVALFREFKKGQVLRHAERVALLRGLCHRRPVDSSAPGAVADDVSEGRLTTTAVREVREAYAILHGEEIAAILAAQEGLGSIREAKQNESEARREAVRAELHGYGAACTEPDLEACCMQVEAVAHARGLEDFMRKAGGLKHELLAL 488
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: A0A6H5KM06_9PHAE (DUF4455 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM06_9PHAE) HSP 1 Score: 140 bits (352), Expect = 5.200e-33 Identity = 128/361 (35.46%), Postives = 166/361 (45.98%), Query Frame = 1
Query: 1 VRMLSHQPRAPA--RSSLSRLRAAEEKRRCLDAAATVGFEELLVQIADDMEAAVLRASDDIRQRLSAVDARIAAALADLDNDEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRRREDWRRLRHDAALRDFAADAASEQFADPPERRVLFASFRAQQDERQTRRLAVLGALMPSGSLSSSLEEASVAAVLAVFKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHEIHRYAALAPAPDLPAHAAALAAATADPAQEETFRKSGGLRQELKAL 1077
VR L HQP P+ RS +LR + +RR DA A FE + I++DME VL AS +R L + +A LA+L D+ L D V L+ RS + +F LE VE R+ G L LV ++ IA R+P+EIER++EE A E+N V+I NR AHA LL ME+ T RREDWRRLRHD AL F D + F +P ER VLF F+ Q R R+A+L L + SS A V ++ R E+H Y A PDL A + A D E+ RK+GGL+ EL AL
Sbjct: 83 VRTLHHQPLDPSEPRSGFEKLRKKQAERRERDARAIETFEAGVSAISEDMEQRVLEASYALRDGLEEAEEAVATILAELGVDDQLVQGDMAYVEEMWSKLEAQCDRRSSRIQEFRKGLERVEILRSEAVGGELRRLVDDMIAIAFRMPDEIERIAEEHAHELNGVLISNRLAHAELLGTMEKRDF------AFTVGIRREDWRRLRHDRALVQFHTDLTAPNFTNPSERVVLFREFKKGQVLRHAERVALLRDLCRRRPVDSSAPGAVADDASEVGGSVDTFFHYDKWCACLV-------------------RAELHGYGAACTEPDLEACCVQVEAVAHDRGLEDFMRKAGGLKHELLAL 418
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: H3H2T6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2T6_PHYRM) HSP 1 Score: 127 bits (318), Expect = 2.670e-28 Identity = 112/355 (31.55%), Postives = 170/355 (47.89%), Query Frame = 1
Query: 16 HQPRAPARSSLSRLRAAEEKRRCLDAAATVGFEELLVQIADDMEAAVLRASDDIRQRLSAVDARIAAALADLDNDEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRRREDWRRLRHDAALRDFAADAASEQFADPPERRVLFASFRAQQDE-RQTRRLAVLGALMPSGSLSSSLEEASVAAVLAVFKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHEIHRYAALAPAPDLPAHAAALAAATADPAQEETFRKSGGLRQELKAL 1077
+Q R + S+++ + +RR A + + + + I++D+E A++RA+D +++ L +DA I A L ++E L A D + G LD + R+ + FAA LE +E R A L L L++ A LP E+ER+ E +A EVN VVI NR +A+L ARM A+V A W++ + WR LRHDAA+ F A +S F DP ER+ + R Q+E +RLAVL L +G+ SS E+A +L A R E+H + A+A + L A +D + E+ FR +GGL+ EL L
Sbjct: 312 NQSRQKPKEGPSQIQLNDVRRRDRHMEAQMQYADEVKAISEDVEVAIIRAADQVKEVLVTIDAAIDEAKVALTSNELLLASDNESILGMWRELDAVCQRRTDEITQFAAQLEEIEQTRIHRVRAELQRLTSTLMETAHALPPEVERIIEAEAYEVNTVVISNRRVYADLAARMGTANVDAFLNARLDWEQGQMRWRVLRHDAAIARFQATLSSPLFTDPDERQQVLQQIRVFQEEVHAEQRLAVLKQLNDAGAALSS-EQAK--RILEELSATQQFEEEKNQSFFADLRELHESKRGAAKALREVLRLELHGFGAMAKEGAIEEAKGTLVALLSDDSMEDFFRAAGGLKAELDIL 663
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: G4YEK1_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YEK1_PHYSP) HSP 1 Score: 122 bits (307), Expect = 6.950e-27 Identity = 103/328 (31.40%), Postives = 161/328 (49.09%), Query Frame = 1
Query: 97 ATVGFEELLVQIADDMEAAVLRASDDIRQRLSAVDARIAAALADLDNDEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRRREDWRRLRHDAALRDFAADAASEQFADPPERRVLFASFRAQQDE-RQTRRLAVLGALMPSGSLSSSLEEASVAAVLAVFKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHEIHRYAALAPAPDLPAHAAALAAATADPAQEETFRKSGGLRQELKAL 1077
A + + E + I++D+E A++RA+D++++ L+A+DA I A A L ++E L A D + L+ + R+ +A FAA L+ +E R GL L L++ A LP E+ER+ E +A EVN VVI NR +A+L+ARM A+V +A W++ + WR LRH+ A+ F A S F DP ERR + R Q++ + +RL VL L +G+ SS E+A +L R E+H + A+A + + L + +D E+ FR +GGL+ EL L
Sbjct: 3 AQMQYAEDVRAISEDVEVAIIRAADEVKEVLAAIDAGIREAQAALTDNELLLASDNESILAMWRELEAVCQRRTNEIARFAARLDEIEQTRIHRVRVGLQHLTHVLMETAHALPPEVERIIEAEAYEVNTVVISNRRVYADLVARMGTANVDEFLSARLAWEQGQVRWRHLRHEDAIDKFQATLNSPLFTDPEERRHVLEQIRVFQEKIHREQRLEVLKRLKDAGAALSS-EQAK--RILEELSTTQQFEEEKNQSFFSDLRGLHESKGDAAKSLREDLRLELHGFGAMAKEGAIEEAKSTLVSLLSDDTMEDFFRAAGGLKTELDTL 327
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: A0A6A3F997_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F997_9STRA) HSP 1 Score: 122 bits (306), Expect = 9.700e-27 Identity = 111/358 (31.01%), Postives = 171/358 (47.77%), Query Frame = 1
Query: 13 SHQPR-APARSSLSRLRAAEEKRRCLDAAATVGFEELLVQIADDMEAAVLRASDDIRQRLSAVDARIAAALADLDNDEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRRREDWRRLRHDAALRDFAADAASEQFADPPERRVLFASFRAQQDE-RQTRRLAVLGALMPSGS-LSSSLEEASVAAVLAVFKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHEIHRYAALAPAPDLPAHAAALAAATADPAQEETFRKSGGLRQELKAL 1077
+HQP+ P++ L+ E +RR A + + + I++D+E A++RA+DD+++ L+A+D I A A L +++ L A D + L+ + RS + FAA L+ +E R GL L L++ A LP E+ER+ E +A EVN VVI NR +A+L+ARM A+V A W++ + WR LRHD A+ F A S F DP ERR + R Q++ + +RL VL L +G+ LSS L + +L +A R E+H + A+A + L +D + E FR +GGL+ EL L
Sbjct: 95 AHQPQEGPSQIELN-----EVRRRDRHMEAQMQYANEVKAISEDVEVAIIRAADDVKEVLAAIDDGIREAQAALTSNDLLLASDNESILTMWSELEAVCQRRSDEITRFAARLDEIEQTRIHRVRVGLQRLTHVLMETAHALPPEVERIIEAEAYEVNTVVISNRRVYADLVARMGTANVDVFLGARLAWEQGQIQWRHLRHDDAVAKFQATLDSPVFTDPEERRHVLQQIRVFQEKIHREQRLEVLKRLEEAGAALSSELAKR----ILEELRATQQLEEDANQSFSSDLRGLHQSKGDAAKALREDLRLELHGFGAMAKEGAIEEAKKTLVTLLSDDSMENFFRAAGGLKTELDTL 443
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: A0A2D4BI97_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI97_PYTIN) HSP 1 Score: 114 bits (286), Expect = 4.030e-24 Identity = 103/329 (31.31%), Postives = 147/329 (44.68%), Query Frame = 1
Query: 94 AATVGFEELLVQIADDMEAAVLRASDDIRQRLSAVDARIAAALADLDNDEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRRREDWRRLRHDAALRDFAADAASEQFADPPERRVLFASFRAQQDE-RQTRRLAVLGALMPSGSLSSSLEEASVAAVLAVFKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHEIHRYAALAPAPDLPAHAAALAAATADPAQEETFRKSGGLRQELKAL 1077
AA F + + ++++D+E+A+++A+D+++ L VDA++ A + L D GV + RS +A F LE L + L+D A LPNE+ERL E +A E+N VVI NR A+A+L+AR+ A V A W+ + WRRLRHD AL F AS QF DP ER+++ A RA Q E RRL VL L L + + +V L + R E+H + ALAP D+ + D EE FR +GGLR EL +
Sbjct: 342 AALRSFTDDVKRVSEDIESAIIQAADELKDALRRVDAQLTALDHAAHDAAALLLTDHDGVLQLWRETEVCCESRSQLIAVFRERLERXXXXXXXXXXXXXXGLTKTLMDTAHALPNEVERLIEAEAFELNVVVITNRKAYADLIARLASADVDVFLRARLQWEHGQTLWRRLRHDDALARFEHTLASTQFTDPRERQLVLAQIRAFQRELHDARRLPVLRRLQ---ELQADVTSTAVTKSLQELSEIQRLEEERNAFFFDELRVVHDAKVREALAMREALRLELHGFGALAPEGDITRCKQQIDGVLQDETLEEFFRMAGGLRNELDGI 667
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: A0A0W8CNL9_PHYNI (DNA-directed RNA polymerase III subunit RPC8 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CNL9_PHYNI) HSP 1 Score: 113 bits (282), Expect = 1.320e-23 Identity = 85/238 (35.71%), Postives = 126/238 (52.94%), Query Frame = 1
Query: 4 RMLSHQPRAPARSSLSRLRAAEEKRRCLDAAATVGFEELLVQIADDMEAAVLRASDDIRQRLSAVDARIAAALADLDNDEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRRREDWRRLRHDAALRDFAADAASEQFADPPERRVLFASFRAQQD 717
++L QP P++ L+ +R RR A + + E + I +D+E A++RA+D +++ L+ VD I A + L N+E L A D + LD + R+ +A FAA LE +E R GL L L++ A LP E+ER+ E +A EVN VVI NR +A+L+ARME A+V A W++ + WR LRH+ + F A S F DP ER+ L R Q+
Sbjct: 315 KLLQTQPEGPSQIELNAVR-----RRDRHMEAQMQYGEEVKAIREDVEVAIIRAADHVKEVLATVDLAIQEAKSALTNNELLLASDNYKILRMWSELDAVCQRRTDEIAQFAAQLEEIEQSRINRIRMGLQRLTCVLMETAHALPPEVERIIEAEAYEVNTVVISNRRVYADLVARMETANVDVFLNARLAWEQGQIRWRHLRHEDVIAKFQATLNSPLFTDPEERQQLLEQIRVFQE 547
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: A0A7S2CXH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CXH5_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.900e-18 Identity = 59/160 (36.88%), Postives = 89/160 (55.62%), Query Frame = 1
Query: 109 FEELLVQIADDMEAAVLRASDDIRQRLSAVDARIAAALADLDNDEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRR 588
FE L +I+DD+E V+ AS +++ ++ D RI +L+ D L +D V + + + + +R + FAA LE +E RA L LV RL+ +A EIERL EE+A E+N V+++NR +HA LLA ME+ HVL A +W+ R
Sbjct: 16 FELKLTEISDDLEIRVMHASRGVQKATASNDQRIGETFGELNQDLLLVTKDHQYVLDSWDEIHAVCEKRFADIRGFAAELEGIERDRARVVATELRQLVERLMGVAYMPGTEIERLVEEQAFELNTVIVLNRKSHAELLALMEKQHVLVCMDARVSWEAR 175
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Match: A0A0G4IJ88_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJ88_PLABS) HSP 1 Score: 67.0 bits (162), Expect = 2.410e-8 Identity = 47/151 (31.13%), Postives = 75/151 (49.67%), Query Frame = 1
Query: 238 DEWLAARDETGVAGARENLDGLLAERSGCLADFAAALEAVEARRAAEAGAGLHALVRRLVDIAARLPNEIERLSEEKALEVNAVVIMNRGAHANLLARMERAHVLTAAAAVATWDRRREDWRRLRHDAALRDFAADAASEQFADPPERRVL 690
D+ L + + G E ++ A R F A L+ +E RR + + + A+V LVDI +LP EIE+ E + VN +++ NR A +L+AR+ A V A W+ RR W+ LRH + A+ S ++ +P RR +
Sbjct: 85 DDVLIEMELSDFEGLWETVEREFASREATWVQFEADLQTIERRRQVDMSSEIQAVVAELVDIGFQLPEEIEKDFEPEVNSVNELIVSNRVAFLDLIARLRVADVRLKDRQNAIWEGRRGAWKTLRHRRCMEIARAELNSPEWVNPGSRRRI 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7894.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7894.2.1 >prot_P-wetherbeei_contig7894.2.1 ID=prot_P-wetherbeei_contig7894.2.1|Name=mRNA_P-wetherbeei_contig7894.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=357bp MLSHQPRAPARSSLSRLRAAEEKRRCLDAAATVGFEELLVQIADDMEAAVback to top mRNA from alignment at P-wetherbeei_contig7894:1661..2944+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7894.2.1 ID=mRNA_P-wetherbeei_contig7894.2.1|Name=mRNA_P-wetherbeei_contig7894.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1284bp|location=Sequence derived from alignment at P-wetherbeei_contig7894:1661..2944+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7894:1661..2944+ >mRNA_P-wetherbeei_contig7894.2.1 ID=mRNA_P-wetherbeei_contig7894.2.1|Name=mRNA_P-wetherbeei_contig7894.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1071bp|location=Sequence derived from alignment at P-wetherbeei_contig7894:1661..2944+ (Phaeothamnion wetherbeei SAG_119_79)back to top |