mRNA_P-wetherbeei_contig7874.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7874.1.1
Unique NamemRNA_P-wetherbeei_contig7874.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A6H5L2R2_9PHAE (LNS2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R2_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 1.050e-69
Identity = 126/235 (53.62%), Postives = 162/235 (68.94%), Query Frame = 1
Query:    1 LYMRVGEDGYCTFPDGRAVPPPEATRALK----MLPGVNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTI-DHTHEGVCACL-NWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAGPP---PVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRW 678
            LY+RV EDG+CTF DGR  P  EA   L     ++ G N +RFE+R+ RD RVLVAECF F+W   +  +I VDIDGTITRSD+ GL+MT SPG + +H HEG+C+ L   + +AGAQV+YLTSRPI+LA+KTR FL +  Q+G  LPLGPL      VSGVL++ELV K+MH +K  ALLD+   FR AG      VF AGIGNR  D +AY AAG+P ++I++ D  S ++ W
Sbjct:  107 LYLRVQEDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRDPRVLVAECFAFVWDV-NTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRVW 340          
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: D8LKT7_ECTSI (LNS2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT7_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 6.840e-62
Identity = 111/207 (53.62%), Postives = 146/207 (70.53%), Query Frame = 1
Query:   88 MLPGVNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTI-DHTHEGVCACL-NWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAGPP---PVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWSPSTA 693
            ++ G N +RFE+R+ RD RVLVAECF F+W   +  +I VDIDGTITRSD+ GL+MT SPG + +HTHEG+C+ L   + +AGAQV+YLTSRPI+LA+KTR FL +  Q+G  LPLGPL      VSGVL++ELV K+MH +K  ALLD+   FR AG      VF AGIGNR  D +AY AAG+P ++I++ D  S ++ W   T+
Sbjct:    8 LVDGFNTVRFEIRYLRDPRVLVAECFAFVWDV-NTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKRLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRVWDGDTS 213          
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A836C9R7_9STRA (LNS2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R7_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.620e-49
Identity = 110/272 (40.44%), Postives = 145/272 (53.31%), Query Frame = 1
Query:  121 MRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSV------------------------------------------------------------SGVLFKELVLKDMHIFKSAAL---------------------LDIVHVFRRAGPP---PVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWSP 684
            +RF  D RVLVAECF F + A D R++ +DIDGTIT+SD+ GL+MTFSPG  DH   G+C+ L+ +++ GA +LYLTSRP+ LA +TR FLM+LRQDG+LLPLGPL+T KS V                                                            + V+++E++ KDMH FK +AL                      ++  VF RAG P   PV+ AGIGNR+TD  AY AAGVP ++I I D ++ IQ WSP
Sbjct:  702 VRFRGDPRVLVAECFAFAFDARD-RLLVMDIDGTITKSDVQGLIMTFSPGMTDHLQPGICSLLHHMSNEGAHILYLTSRPVVLAKRTRAFLMDLRQDGLLLPLGPLLTCKSKVRSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPSTLTDVVYREVIAKDMHEFKGSALQASLISALSAKNVTSGLQMLHAEVAEVFFRAGRPEDDPVYAAGIGNRETDAFAYQAAGVPEDFICIIDSSANIQIWSP 972          
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A6G0WUC1_9STRA (LNS2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUC1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.340e-37
Identity = 89/232 (38.36%), Postives = 128/232 (55.17%), Query Frame = 1
Query:    7 MRVGEDGYCTFPDGRAVPPPEATRALKML------PGVNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAG----PPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQ 672
            M + + G C F  G  +P      A+  +      P   ++RFE R P    V   EC +++W   DA V+ VD+DGTIT SD+ G + T   G  D+ H GVCA  + +   G ++LYLT+RPI   + +R+ L   RQ  + LP GPL+T+   V+G L  E+V K+ H+FK   +++ V +   AG    P PVFVAG GNR TD  AYL  G+    I++ DPTS ++
Sbjct:  180 MTLNDKGRCIFRSGSEMPDELTLAAISSILPMDHPPLYASVRFEHRKP-SAAVRFVECRMYVWRPDDA-VVVVDLDGTITISDVEGHIRTIRLGQYDYIHAGVCAFYSRLLGMGLRILYLTARPIDWTNASRDHLDRARQGNVRLPPGPLLTNSMGVTGALMTEVVHKNPHVFKRT-VMNAVQMACIAGGRISPHPVFVAGFGNRPTDVQAYLDVGIDGSCIFLIDPTSNLR 408          
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: F0WAE7_9STRA (Lipinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WAE7_9STRA)

HSP 1 Score: 139 bits (351), Expect = 3.850e-35
Identity = 86/226 (38.05%), Postives = 124/226 (54.87%), Query Frame = 1
Query:    7 MRVGEDGYCTFPDGRAVPPPEATRALKMLP-GVNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAG---PPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQ 672
            M + E G C F  G   PP +A   +++     N +RFE        +   EC +++W   ++ VI VD+DGT+T SD+ G + T   G  D  H G C     + +   +VLYLT+RP+  AS +RN L N  Q   +LP GPLIT+ + ++G L  E+V K+ HIFK   L +I      AG     P+FVAG GNR +D LAY  AG+  + I++ D TS+I+
Sbjct:  175 MSLLERGRCVFQSGSLTPPIDALANVELYEDNANYVRFEHYQRSTCCIRYVECRLYVWHPEES-VIIVDLDGTLTVSDVEGHIRTLRLGQYDFLHRGTCQFFTKLHELQMRVLYLTARPLDWASASRNHLENAIQLKHVLPPGPLITNSNGLTGALLTEVVNKNPHIFKRQVLQEIQLCLIHAGRVTEHPIFVAGFGNRSSDVLAYKDAGIELDMIFLIDSTSSIK 399          
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A024GU52_9STRA (LNS2 domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GU52_9STRA)

HSP 1 Score: 139 bits (350), Expect = 5.500e-35
Identity = 86/226 (38.05%), Postives = 125/226 (55.31%), Query Frame = 1
Query:    7 MRVGEDGYCTFPDGRAVPPPEATRALKMLPG-VNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAG---PPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQ 672
            M + E G C F  G   PP +A   +++     N +RFE        +   EC +++W   ++ VI VD+DGT+T SD+ G + T   G  D+ H G C     + +   +VLYLT+RP+  A+ +RN L N  Q   +LP GPLIT+ + ++G L  E+V K+ HIFK   L +I      AG     P+FVAG GNR +D LAY  AG+  + I++ D TSAI+
Sbjct:  177 MSLLERGRCIFQSGSLTPPIDAFDHVELYENNANYVRFEHYQKSTCCIRYVECRLYVWHPEES-VIIVDMDGTLTVSDVEGHIRTLRLGQYDYLHRGTCQFFTKLHELQMRVLYLTARPLDWATASRNHLENAIQLKHVLPPGPLITNSNGLTGALLTEVVNKNPHIFKRQVLEEIQLCLIHAGRITEHPIFVAGFGNRSSDVLAYKDAGIELDMIFLIDSTSAIK 401          
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A2R5G6Z4_9STRA (Phosphatidate phosphatase LPIN3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6Z4_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.330e-33
Identity = 89/247 (36.03%), Postives = 132/247 (53.44%), Query Frame = 1
Query:    7 MRVGEDGYCTFPDGRAVPPPEA----TRALKMLPGVNALRFEMRFPR--DKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLL-------MTFSPGTIDHTHEGVCACLNWITD-AGAQVLYLTSRPITLASKTRNFLMNLRQ----DGML---LPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAGPP----PVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQ 672
            M +G+ G   FP G+  P PE     T  L  L G + L+FE R+    + R+   E   +LW ++D+ V++ DIDGTITRSD+ G++       M +  G   H H GVC   N + D   A ++YLT+RP+ L + TR+++  L Q      M    LP GP+IT  ++++    +E+V +  H+FK+  L  +   F  AG      PVF+A  GN+DTD +AY A G PP  I+I    S +Q
Sbjct:   75 MEIGDGGKAQFPSGKLAPDPEVLGNVTSLLDEL-GPHKLKFEHRYTANGEYRLNYVEALFWLWDSSDSIVVS-DIDGTITRSDVGGMINGVLGARMGWKKG---HAHPGVCFLYNHLIDETNAHIMYLTARPLNLINDTRSYIYELEQPVSSSSMTMRQLPPGPIITDTTNLTSSFRREVVDRSSHVFKTEMLSQLRDCFTNAGRDIRRYPVFLATFGNKDTDAVAYRAVGAPPVTIFIIGTDSRVQ 316          
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A0W8DM28_PHYNI (LNS2 domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DM28_PHYNI)

HSP 1 Score: 132 bits (333), Expect = 4.740e-33
Identity = 84/229 (36.68%), Postives = 119/229 (51.97%), Query Frame = 1
Query:    7 MRVGEDGYCTFPDGRAVPPPEATRALKMLPG-VNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAG---PPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWS 681
            M + E G CTF  G  + PPE      +     N +RFE        V   +  + LW   ++ V+ VD+DGT+T SD+ G + T   G  D  H G C     + + G +++YLT+RP+  AS +R  L N  Q  + LP G LIT+ + ++G LF E+V K  H+FK   L ++      AG     PVFVAG GNR TD +AY   G+ P  I++ DP S I+  S
Sbjct:   91 MELFERGRCTFITGGLIIPPEDLCFADLTEDRPNLVRFEHYQKYTNTVRYVDAKLHLWGPNES-VVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELGMRIVYLTARPLDWASASRTHLENAVQQSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEKVGIDPSLIFMLDPYSNIKAVS 318          
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A0P1A5S1_PLAHL (Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5S1_PLAHL)

HSP 1 Score: 134 bits (338), Expect = 4.960e-33
Identity = 85/230 (36.96%), Postives = 120/230 (52.17%), Query Frame = 1
Query:    7 MRVGEDGYCTFPDGRAVPPPEATRALKMLPG-VNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAAL----LDIVHVFRRAGPPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWS 681
            M + E G CTF  G  V PPE      +     N +RFE        V   +  + LW   ++ V+ VD+DGT+T SD+ G + T   G  D  H G C     + + G +++YLT+RP+  AS +R  L N  Q  + LP G LIT+ + ++G LF E+V K  H+FK   L    L ++H   R    PVFVAG GNR TD +AY   G+ P  I++ DP S ++  S
Sbjct:  225 MELQERGRCTFVTGGLVIPPEDLCFADLTENRPNLVRFEHYQKYTNTVRYVDTKLHLWGPNES-VVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELGMRIVYLTARPLDWASASRTHLENAEQQSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHA-GRVTEHPVFVAGFGNRPTDIVAYQEVGMDPSLIFMLDPYSNVKAVS 452          
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A225WXZ7_9STRA (Lipin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXZ7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.990e-32
Identity = 84/230 (36.52%), Postives = 120/230 (52.17%), Query Frame = 1
Query:    7 MRVGEDGYCTFPDGRAVPPPEATRALKMLPGV-NALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAAL----LDIVHVFRRAGPPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWS 681
            M + E G CTF  G  + PPE      +     N +RFE        V   +  + LW   ++ V+ VD+DGT+T SD+ G + T   G  D  H G C     + + G +++YLT+RP+  AS +R  L N  Q  + LP G LIT+ + ++G LF E+V K  H+FK   L    L ++H   R    PVFVAG GNR TD +AY   G+ P  I++ DP S ++  S
Sbjct:  201 MELQERGRCTFITGGIMIPPEDLLFADLSEEYPNLVRFEHYQKYTNTVRYVDTKLHLWGPNESAVV-VDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELGLRIVYLTARPLDWASASRTHLENAEQQSIKLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHA-GRVTEHPVFVAGFGNRPTDIVAYEEVGIDPSLIFMLDPYSNVKAVS 428          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2R2_9PHAE1.050e-6953.62LNS2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKT7_ECTSI6.840e-6253.62LNS2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836C9R7_9STRA1.620e-4940.44LNS2 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6G0WUC1_9STRA5.340e-3738.36LNS2 domain-containing protein n=1 Tax=Aphanomyces... [more]
F0WAE7_9STRA3.850e-3538.05Lipinlike protein putative n=1 Tax=Albugo laibachi... [more]
A0A024GU52_9STRA5.500e-3538.05LNS2 domain-containing protein n=2 Tax=Albugo cand... [more]
A0A2R5G6Z4_9STRA1.330e-3336.03Phosphatidate phosphatase LPIN3 n=1 Tax=Hondaea fe... [more]
A0A0W8DM28_PHYNI4.740e-3336.68LNS2 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A0P1A5S1_PLAHL4.960e-3336.96Protein involved in plasmid maintenance/nuclear pr... [more]
A0A225WXZ7_9STRA1.990e-3236.52Lipin n=1 Tax=Phytophthora megakarya TaxID=4795 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7874contigP-wetherbeei_contig7874:1096..2934 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LKT7
PFAMsHA,LNS2,Lipin_N
Model size693
Max annot lvl2759|Eukaryota
KEGG rclassRC00017
KEGG koko:K15728
KEGG ReactionR02239
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.04e-62
EggNOG OGsCOG5083@1|root,KOG2116@2759|Eukaryota
Ec32 ortholog descriptionLNS2, Lipin/Ned1/Smp2
Ec32 orthologEc-11_005480.1
EC3.1.3.4
Descriptionphosphatidate phosphatase activity
Cds size687
COG categoryC
BRITEko00000,ko00001,ko01000,ko01009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7874.1.1prot_P-wetherbeei_contig7874.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7874 1102..2934 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187005.979165-UTR-P-wetherbeei_contig7874:1095..11011683187005.979165-UTR-P-wetherbeei_contig7874:1095..1101Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7874 1096..1101 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187005.9892657-CDS-P-wetherbeei_contig7874:1101..12201683187005.9892657-CDS-P-wetherbeei_contig7874:1101..1220Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7874 1102..1220 +
1683187005.997532-CDS-P-wetherbeei_contig7874:1642..18531683187005.997532-CDS-P-wetherbeei_contig7874:1642..1853Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7874 1643..1853 +
1683187006.0054326-CDS-P-wetherbeei_contig7874:2036..21081683187006.0054326-CDS-P-wetherbeei_contig7874:2036..2108Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7874 2037..2108 +
1683187006.0137324-CDS-P-wetherbeei_contig7874:2340..24881683187006.0137324-CDS-P-wetherbeei_contig7874:2340..2488Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7874 2341..2488 +
1683187006.0217586-CDS-P-wetherbeei_contig7874:2797..29341683187006.0217586-CDS-P-wetherbeei_contig7874:2797..2934Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7874 2798..2934 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7874.1.1

>prot_P-wetherbeei_contig7874.1.1 ID=prot_P-wetherbeei_contig7874.1.1|Name=mRNA_P-wetherbeei_contig7874.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=229bp
MRVGEDGYCTFPDGRAVPPPEATRALKMLPGVNALRFEMRFPRDKRVLVA
ECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCAC
LNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSS
VSGVLFKELVLKDMHIFKSAALLDIVHVFRRAGPPPVFVAGIGNRDTDGL
AYLAAGVPPEYIYINDPTSAIQRWSPSTA
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mRNA from alignment at P-wetherbeei_contig7874:1096..2934+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7874.1.1 ID=mRNA_P-wetherbeei_contig7874.1.1|Name=mRNA_P-wetherbeei_contig7874.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1839bp|location=Sequence derived from alignment at P-wetherbeei_contig7874:1096..2934+ (Phaeothamnion wetherbeei SAG_119_79)
CTGTACATGCGGGTCGGCGAGGATGGATACTGCACGTTTCCGGACGGCCG CGCCGTGCCGCCGCCCGAGGCGACGCGTGCCCTCAAGATGCTACCCGGCG TCAACGCGCTGCGCTTCGAAATGAGGTGAGAGAGCGATAAGATTCACTTA TCGGCGAGAAAGGACTTCTTCTTCCTGCGAAAAGGGTGGTATATCGAGGC TCCCACTTCTGGCGTTTGGGTTTATCGCGTGCTTGTTTGCACGCCTTCGG CCTTCATCGAGAATTTGTTCGACCAAGCGCGAGGAAATGATGCGTGCCGG GAAGCTTTTCTGCAGGTCTGCAATATGCTTTACCAAGGGCCGCTCTAAAG TCGTGTGTGATTTCTCGTGTGCTTGTGTCTGTGGCGGTTGGCACAGTTTA TTGAGGCGCTACCGATAATTCTTTTTTCCACAAGGAATGAACGGATGTTT ACCATTTTGGTTAGACTATCTGGGAACGCATGGTGAGAAGAAAAAATTAC AAAAGAGAACGCGAATCCCAAAAACCTGCCAACGCCTCTGATGGCAGGTT TCCGCGGGACAAGCGCGTGCTGGTGGCCGAGTGCTTCGTGTTCCTGTGGT CCGCCGCAGACGCCCGCGTCATCGCCGTCGACATCGACGGCACTATTACG CGCAGCGACTTGCCGGGTCTGTTGATGACCTTCAGCCCGGGAACCATCGA CCACACGCACGAAGGCGTTTGCGCTTGCCTCAACTGGATCACCGACGCTG GCGCACAGGTGAAAATCAGTGGCGGTGTTTTGATGGGGAAGGGGAGGAAA TGGCTTGGGCGAAACAGTTTGTGGAATGGTCTGGAGTACCGCCGAGCAAG GATGGTTGGGCGGGCTGCCAACTCATACAAGCAGGCGAATAAGGTTCGGC CGTTAATTTTTTTGCTGCCGACTGTTCTGTAACCTGCGCAGGTGCTCTAC CTGACTTCGCGGCCCATCACACTCGCCTCCAAGACGAGGAACTTTCTCAT GAACCTGCGCCAGGTAATTTTGAGAGGGGTAATTTCGGTGAACGGGAAGG GATGCATACTGGCGGGGTTAGCATTCTGCTCTTCTTGCCTGGTTAGCCTG TCTAACGCCTCTTGCACGCAGATCCAGCGAGGTGGCTGCTGTCATGGACA GCCACATGTGCTCAATTTATTATTTATTTCCCTTCCGATTCAACTTCGAC ATTCCAACTTGCATTCCCATCGCTCCCGTTCGTTGCCTGGCACAGGACGG GATGCTGCTGCCGCTGGGGCCACTTATCACGAGCAAGTCGAGCGTATCGG GTGTGCTCTTCAAGGAGCTTGTCTTGAAGGACATGCACATCTTTAAGTCC GCCGCGCTGCTCGACATCGTCCACGTCTTCCGCCGCGCCGGTCGTTTTGG ACCACCAAACTACGACGCCACAGTGGCCGCTGCTTCCGCTGTTGCCTTCA GTCCTGCAGCCGCTTCTATTCCCGCCCACGCTGCTTCTGCTGCAGCTCCA ATGTCGGCGGTGAAGAGCCCTGCGGCCGTGGCTTCCGGAGAGGCTGCAGC GACAACGGGGGGGACGGAAAGTGAGGAGGTGGCTATACCTAGTCCAACGA ACGGATCTATGGCCGGCAGCAGCGGCAGCAGTGCTTATGGCGGTTACAGT GCTTCCGGTGGCACCAGTGGCGGCGGCAGTAGCGGCGGGAGCGGCTGGGA AGCGCCGCCGGTGTTCGTCGCCGGCATCGGCAACCGCGACACGGATGGCC TTGCGTACCTTGCCGCCGGCGTGCCGCCGGAGTACATTTACATTAACGAC CCGACGTCAGCGATTCAACGGTGGTCGCCGTCCACGGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7874:1096..2934+

>mRNA_P-wetherbeei_contig7874.1.1 ID=mRNA_P-wetherbeei_contig7874.1.1|Name=mRNA_P-wetherbeei_contig7874.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig7874:1096..2934+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGGTCGGCGAGGATGGATACTGCACGTTTCCGGACGGCCGCGCCGT
GCCGCCGCCCGAGGCGACGCGTGCCCTCAAGATGCTACCCGGCGTCAACG
CGCTGCGCTTCGAAATGAGGTTTCCGCGGGACAAGCGCGTGCTGGTGGCC
GAGTGCTTCGTGTTCCTGTGGTCCGCCGCAGACGCCCGCGTCATCGCCGT
CGACATCGACGGCACTATTACGCGCAGCGACTTGCCGGGTCTGTTGATGA
CCTTCAGCCCGGGAACCATCGACCACACGCACGAAGGCGTTTGCGCTTGC
CTCAACTGGATCACCGACGCTGGCGCACAGGTGCTCTACCTGACTTCGCG
GCCCATCACACTCGCCTCCAAGACGAGGAACTTTCTCATGAACCTGCGCC
AGGACGGGATGCTGCTGCCGCTGGGGCCACTTATCACGAGCAAGTCGAGC
GTATCGGGTGTGCTCTTCAAGGAGCTTGTCTTGAAGGACATGCACATCTT
TAAGTCCGCCGCGCTGCTCGACATCGTCCACGTCTTCCGCCGCGCCGGTC
CGCCGCCGGTGTTCGTCGCCGGCATCGGCAACCGCGACACGGATGGCCTT
GCGTACCTTGCCGCCGGCGTGCCGCCGGAGTACATTTACATTAACGACCC
GACGTCAGCGATTCAACGGTGGTCGCCGTCCACGGCC
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