mRNA_P-wetherbeei_contig7874.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A6H5L2R2_9PHAE (LNS2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R2_9PHAE) HSP 1 Score: 234 bits (598), Expect = 1.050e-69 Identity = 126/235 (53.62%), Postives = 162/235 (68.94%), Query Frame = 1
Query: 1 LYMRVGEDGYCTFPDGRAVPPPEATRALK----MLPGVNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTI-DHTHEGVCACL-NWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAGPP---PVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRW 678
LY+RV EDG+CTF DGR P EA L ++ G N +RFE+R+ RD RVLVAECF F+W + +I VDIDGTITRSD+ GL+MT SPG + +H HEG+C+ L + +AGAQV+YLTSRPI+LA+KTR FL + Q+G LPLGPL VSGVL++ELV K+MH +K ALLD+ FR AG VF AGIGNR D +AY AAG+P ++I++ D S ++ W
Sbjct: 107 LYLRVQEDGFCTFADGRLQPALEALAMLAKDDTLVDGFNTVRFEIRYLRDPRVLVAECFAFVWDV-NTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKKLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRVW 340
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: D8LKT7_ECTSI (LNS2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT7_ECTSI) HSP 1 Score: 210 bits (535), Expect = 6.840e-62 Identity = 111/207 (53.62%), Postives = 146/207 (70.53%), Query Frame = 1
Query: 88 MLPGVNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTI-DHTHEGVCACL-NWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAGPP---PVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWSPSTA 693
++ G N +RFE+R+ RD RVLVAECF F+W + +I VDIDGTITRSD+ GL+MT SPG + +HTHEG+C+ L + +AGAQV+YLTSRPI+LA+KTR FL + Q+G LPLGPL VSGVL++ELV K+MH +K ALLD+ FR AG VF AGIGNR D +AY AAG+P ++I++ D S ++ W T+
Sbjct: 8 LVDGFNTVRFEIRYLRDPRVLVAECFAFVWDV-NTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHTHEGICSLLARMVDEAGAQVVYLTSRPISLAAKTRTFLASTEQEGKRLPLGPLQCCLEKVSGVLWRELVSKNMHDYKITALLDLARPFREAGRTFGEAVFAAGIGNRVHDAVAYRAAGIPKDFIFLIDTESNLRVWDGDTS 213
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A836C9R7_9STRA (LNS2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R7_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.620e-49 Identity = 110/272 (40.44%), Postives = 145/272 (53.31%), Query Frame = 1
Query: 121 MRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSV------------------------------------------------------------SGVLFKELVLKDMHIFKSAAL---------------------LDIVHVFRRAGPP---PVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWSP 684
+RF D RVLVAECF F + A D R++ +DIDGTIT+SD+ GL+MTFSPG DH G+C+ L+ +++ GA +LYLTSRP+ LA +TR FLM+LRQDG+LLPLGPL+T KS V + V+++E++ KDMH FK +AL ++ VF RAG P PV+ AGIGNR+TD AY AAGVP ++I I D ++ IQ WSP
Sbjct: 702 VRFRGDPRVLVAECFAFAFDARD-RLLVMDIDGTITKSDVQGLIMTFSPGMTDHLQPGICSLLHHMSNEGAHILYLTSRPVVLAKRTRAFLMDLRQDGLLLPLGPLLTCKSKVRSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPSTLTDVVYREVIAKDMHEFKGSALQASLISALSAKNVTSGLQMLHAEVAEVFFRAGRPEDDPVYAAGIGNRETDAFAYQAAGVPEDFICIIDSSANIQIWSP 972
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A6G0WUC1_9STRA (LNS2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUC1_9STRA) HSP 1 Score: 144 bits (363), Expect = 5.340e-37 Identity = 89/232 (38.36%), Postives = 128/232 (55.17%), Query Frame = 1
Query: 7 MRVGEDGYCTFPDGRAVPPPEATRALKML------PGVNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAG----PPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQ 672
M + + G C F G +P A+ + P ++RFE R P V EC +++W DA V+ VD+DGTIT SD+ G + T G D+ H GVCA + + G ++LYLT+RPI + +R+ L RQ + LP GPL+T+ V+G L E+V K+ H+FK +++ V + AG P PVFVAG GNR TD AYL G+ I++ DPTS ++
Sbjct: 180 MTLNDKGRCIFRSGSEMPDELTLAAISSILPMDHPPLYASVRFEHRKP-SAAVRFVECRMYVWRPDDA-VVVVDLDGTITISDVEGHIRTIRLGQYDYIHAGVCAFYSRLLGMGLRILYLTARPIDWTNASRDHLDRARQGNVRLPPGPLLTNSMGVTGALMTEVVHKNPHVFKRT-VMNAVQMACIAGGRISPHPVFVAGFGNRPTDVQAYLDVGIDGSCIFLIDPTSNLR 408
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: F0WAE7_9STRA (Lipinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WAE7_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.850e-35 Identity = 86/226 (38.05%), Postives = 124/226 (54.87%), Query Frame = 1
Query: 7 MRVGEDGYCTFPDGRAVPPPEATRALKMLP-GVNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAG---PPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQ 672
M + E G C F G PP +A +++ N +RFE + EC +++W ++ VI VD+DGT+T SD+ G + T G D H G C + + +VLYLT+RP+ AS +RN L N Q +LP GPLIT+ + ++G L E+V K+ HIFK L +I AG P+FVAG GNR +D LAY AG+ + I++ D TS+I+
Sbjct: 175 MSLLERGRCVFQSGSLTPPIDALANVELYEDNANYVRFEHYQRSTCCIRYVECRLYVWHPEES-VIIVDLDGTLTVSDVEGHIRTLRLGQYDFLHRGTCQFFTKLHELQMRVLYLTARPLDWASASRNHLENAIQLKHVLPPGPLITNSNGLTGALLTEVVNKNPHIFKRQVLQEIQLCLIHAGRVTEHPIFVAGFGNRSSDVLAYKDAGIELDMIFLIDSTSSIK 399
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A024GU52_9STRA (LNS2 domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GU52_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.500e-35 Identity = 86/226 (38.05%), Postives = 125/226 (55.31%), Query Frame = 1
Query: 7 MRVGEDGYCTFPDGRAVPPPEATRALKMLPG-VNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAG---PPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQ 672
M + E G C F G PP +A +++ N +RFE + EC +++W ++ VI VD+DGT+T SD+ G + T G D+ H G C + + +VLYLT+RP+ A+ +RN L N Q +LP GPLIT+ + ++G L E+V K+ HIFK L +I AG P+FVAG GNR +D LAY AG+ + I++ D TSAI+
Sbjct: 177 MSLLERGRCIFQSGSLTPPIDAFDHVELYENNANYVRFEHYQKSTCCIRYVECRLYVWHPEES-VIIVDMDGTLTVSDVEGHIRTLRLGQYDYLHRGTCQFFTKLHELQMRVLYLTARPLDWATASRNHLENAIQLKHVLPPGPLITNSNGLTGALLTEVVNKNPHIFKRQVLEEIQLCLIHAGRITEHPIFVAGFGNRSSDVLAYKDAGIELDMIFLIDSTSAIK 401
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A2R5G6Z4_9STRA (Phosphatidate phosphatase LPIN3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6Z4_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.330e-33 Identity = 89/247 (36.03%), Postives = 132/247 (53.44%), Query Frame = 1
Query: 7 MRVGEDGYCTFPDGRAVPPPEA----TRALKMLPGVNALRFEMRFPR--DKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLL-------MTFSPGTIDHTHEGVCACLNWITD-AGAQVLYLTSRPITLASKTRNFLMNLRQ----DGML---LPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAGPP----PVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQ 672
M +G+ G FP G+ P PE T L L G + L+FE R+ + R+ E +LW ++D+ V++ DIDGTITRSD+ G++ M + G H H GVC N + D A ++YLT+RP+ L + TR+++ L Q M LP GP+IT ++++ +E+V + H+FK+ L + F AG PVF+A GN+DTD +AY A G PP I+I S +Q
Sbjct: 75 MEIGDGGKAQFPSGKLAPDPEVLGNVTSLLDEL-GPHKLKFEHRYTANGEYRLNYVEALFWLWDSSDSIVVS-DIDGTITRSDVGGMINGVLGARMGWKKG---HAHPGVCFLYNHLIDETNAHIMYLTARPLNLINDTRSYIYELEQPVSSSSMTMRQLPPGPIITDTTNLTSSFRREVVDRSSHVFKTEMLSQLRDCFTNAGRDIRRYPVFLATFGNKDTDAVAYRAVGAPPVTIFIIGTDSRVQ 316
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A0W8DM28_PHYNI (LNS2 domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DM28_PHYNI) HSP 1 Score: 132 bits (333), Expect = 4.740e-33 Identity = 84/229 (36.68%), Postives = 119/229 (51.97%), Query Frame = 1
Query: 7 MRVGEDGYCTFPDGRAVPPPEATRALKMLPG-VNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAALLDIVHVFRRAG---PPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWS 681
M + E G CTF G + PPE + N +RFE V + + LW ++ V+ VD+DGT+T SD+ G + T G D H G C + + G +++YLT+RP+ AS +R L N Q + LP G LIT+ + ++G LF E+V K H+FK L ++ AG PVFVAG GNR TD +AY G+ P I++ DP S I+ S
Sbjct: 91 MELFERGRCTFITGGLIIPPEDLCFADLTEDRPNLVRFEHYQKYTNTVRYVDAKLHLWGPNES-VVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELGMRIVYLTARPLDWASASRTHLENAVQQSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHAGRVIEHPVFVAGFGNRPTDIVAYEKVGIDPSLIFMLDPYSNIKAVS 318
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A0P1A5S1_PLAHL (Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5S1_PLAHL) HSP 1 Score: 134 bits (338), Expect = 4.960e-33 Identity = 85/230 (36.96%), Postives = 120/230 (52.17%), Query Frame = 1
Query: 7 MRVGEDGYCTFPDGRAVPPPEATRALKMLPG-VNALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAAL----LDIVHVFRRAGPPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWS 681
M + E G CTF G V PPE + N +RFE V + + LW ++ V+ VD+DGT+T SD+ G + T G D H G C + + G +++YLT+RP+ AS +R L N Q + LP G LIT+ + ++G LF E+V K H+FK L L ++H R PVFVAG GNR TD +AY G+ P I++ DP S ++ S
Sbjct: 225 MELQERGRCTFVTGGLVIPPEDLCFADLTENRPNLVRFEHYQKYTNTVRYVDTKLHLWGPNES-VVVVDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELGMRIVYLTARPLDWASASRTHLENAEQQSISLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHA-GRVTEHPVFVAGFGNRPTDIVAYQEVGMDPSLIFMLDPYSNVKAVS 452
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Match: A0A225WXZ7_9STRA (Lipin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXZ7_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.990e-32 Identity = 84/230 (36.52%), Postives = 120/230 (52.17%), Query Frame = 1
Query: 7 MRVGEDGYCTFPDGRAVPPPEATRALKMLPGV-NALRFEMRFPRDKRVLVAECFVFLWSAADARVIAVDIDGTITRSDLPGLLMTFSPGTIDHTHEGVCACLNWITDAGAQVLYLTSRPITLASKTRNFLMNLRQDGMLLPLGPLITSKSSVSGVLFKELVLKDMHIFKSAAL----LDIVHVFRRAGPPPVFVAGIGNRDTDGLAYLAAGVPPEYIYINDPTSAIQRWS 681
M + E G CTF G + PPE + N +RFE V + + LW ++ V+ VD+DGT+T SD+ G + T G D H G C + + G +++YLT+RP+ AS +R L N Q + LP G LIT+ + ++G LF E+V K H+FK L L ++H R PVFVAG GNR TD +AY G+ P I++ DP S ++ S
Sbjct: 201 MELQERGRCTFITGGIMIPPEDLLFADLSEEYPNLVRFEHYQKYTNTVRYVDTKLHLWGPNESAVV-VDLDGTLTISDVEGHIRTLRLGQYDFLHAGACDFFTKLHELGLRIVYLTARPLDWASASRTHLENAEQQSIKLPPGVLITNSTGLTGALFTEVVNKTPHLFKIQVLNELQLTLIHA-GRVTEHPVFVAGFGNRPTDIVAYEEVGIDPSLIFMLDPYSNVKAVS 428 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7874.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7874.1.1 >prot_P-wetherbeei_contig7874.1.1 ID=prot_P-wetherbeei_contig7874.1.1|Name=mRNA_P-wetherbeei_contig7874.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=229bp MRVGEDGYCTFPDGRAVPPPEATRALKMLPGVNALRFEMRFPRDKRVLVAback to top mRNA from alignment at P-wetherbeei_contig7874:1096..2934+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7874.1.1 ID=mRNA_P-wetherbeei_contig7874.1.1|Name=mRNA_P-wetherbeei_contig7874.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1839bp|location=Sequence derived from alignment at P-wetherbeei_contig7874:1096..2934+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7874:1096..2934+ >mRNA_P-wetherbeei_contig7874.1.1 ID=mRNA_P-wetherbeei_contig7874.1.1|Name=mRNA_P-wetherbeei_contig7874.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig7874:1096..2934+ (Phaeothamnion wetherbeei SAG_119_79)back to top |