mRNA_P-wetherbeei_contig7870.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: D8LM18_ECTSI (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM18_ECTSI) HSP 1 Score: 595 bits (1533), Expect = 4.550e-201 Identity = 295/416 (70.91%), Postives = 341/416 (81.97%), Query Frame = 1
Query: 1 LYYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDFAKVHPATGRGMPVVEEGQVPDYGAVVQRLCTYVYRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHTDVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQEGGVGTDASRRRVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLGLDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGGYGYRDD 1248
LYY+H+SIA AVH+AQ F+ +FG DLHPAC A+A+ A D K HP G P V+ + DY ++ LC VY+HGDDRC+TRAMLCHI HHALHDRFH ARDLLLMSHLQD+I D++TQILYNRMMVTLGLCAFR GLIH+ HDCLRDVCSSRVKELLAQGVQ+NRF DK+ EQEKAERRRQ PYHMHINLDLLECCHLT+AMLLEVPNMAQE + RRRV+SKHFRR++DI+NRQVFTGPPENIRDHVIAAAK LM G+W++CS+L+LGLDVW L+PGEG A VK M++EKIQVE LRTYLFTY+ HYESLSLP LC+MF + K AHS+ISKMM+ EL+GSWDQP+ET+VL K +P+ LQ+LAL+FADKAA LVESNERL+DARTG YGYRDD
Sbjct: 539 LYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASAS----APSDGALDVTKAHPGAFLGQPSVDH-EYADYTEQLKNLCVTVYQHGDDRCRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQE----STELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILGLDVWNLIPGEGCAELVKVMVKEKIQVEALRTYLFTYSPHYESLSLPTLCEMFDMQKSKAHSIISKMMLSHELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDD 945
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: A0A835YUE3_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE3_9STRA) HSP 1 Score: 575 bits (1481), Expect = 1.110e-192 Identity = 295/427 (69.09%), Postives = 343/427 (80.33%), Query Frame = 1
Query: 1 LYYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDFAKVHPATGRGMPVVEEGQVP-DYGAVVQRLCTYVYRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHTDVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQEGGVGTDASRRRVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLGLDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGGYGYRDDKNWGRRSGAG 1278
LYY+HDSIA AVHR+Q F+ +G+P+ LHPAC A +A D+A VHPA G P VE VP DY A+++ LC ++Y+HG DR KTRAMLCHI HHALH RFHAARDLLLMSHLQD+I DV TQILYNRMMVTLGLCAFRLGLI + HDCLRDVCSSRVKELLAQG+Q NRF +K+ EQEKAERRRQMPYHMHINLDLLECCHLTAAML EVP MA+E G RRR ISK FRR +D ++ QVFTGPPENIRDHVIA AK LM G+W+KC++++LGLDVW L+PGEG +VK MLREKIQ+E LRTYLFTY+ YESLSLP+LC+MF ++ + AHS+ISKM+I QEL G+WDQP+ TIVL +VEPS LQ+LALQFA+KA++LVESNERLLDARTG YGYR+DK WG G G
Sbjct: 550 LYYKHDSIALAVHRSQAFTAVYGSPAMLHPACLGTGPAATSA-------DYAVVHPAAALGAPTVEV--VPMDYAALMRDLCVFLYKHGGDRAKTRAMLCHITHHALHGRFHAARDLLLMSHLQDNISMVDVDTQILYNRMMVTLGLCAFRLGLIADAHDCLRDVCSSRVKELLAQGIQQNRFQEKNPEQEKAERRRQMPYHMHINLDLLECCHLTAAMLREVPTMARERG----EIRRRHISKLFRRHMDNFDHQVFTGPPENIRDHVIAGAKSLMQGDWRKCADMILGLDVWNLIPGEGQGEKVKVMLREKIQLEALRTYLFTYSPCYESLSLPQLCEMFDLEPRKAHSIISKMLINQELCGAWDQPTNTIVLQRVEPSRLQLLALQFAEKASSLVESNERLLDARTGNYGYREDK-WGGGRGDG 962
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: A0A7S2BS49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BS49_9STRA) HSP 1 Score: 531 bits (1368), Expect = 4.790e-180 Identity = 270/428 (63.08%), Postives = 333/428 (77.80%), Query Frame = 1
Query: 4 YYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDFAKVHPATGRGMPVVEEGQVPDYGAVVQRLC-TYVYRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHTDVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQEGGVGTDASRRRVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLG-LDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGGYGYRDDKNWGRRSGAGG 1281
YY+HDSIA AV +AQ F+ ++G +DLHPAC S AA ++ +HPA G P ++ D +++ LC VY+HGDDR +TRAMLCHI HHALHDRF+ ARDLLLMSHLQ++IGHTDV TQIL+NR MV LGLCAFRLGLI E H CL D+CSSR KELLAQGVQ R++DK+ EQEKAERRRQ PYHMHINL+LLE CHLTAAMLLEVPNMA E + R RVIS+HFR+++D ++RQVFTGPPEN+RDHV+ AAK L +G+W++C++L+L +D+W L+PGE AA +VK ML++KI+ E LRTYLF Y+AHY+SLSLP+LC MF ++K++AH VISKMMI QE+ SWDQP+ET+VLHKVEP+HLQ LALQ+A+KA+ LVESNER LDA GG Y+DD WG R G GG
Sbjct: 298 YYKHDSIAEAVFKAQKFAEKWGQYADLHPACLSPTAALSSEVKPET------LHPAAMGGKPAIDA-VFEDQAVLIKELCHRVVYKHGDDRTRTRAMLCHIAHHALHDRFYDARDLLLMSHLQENIGHTDVTTQILFNRAMVMLGLCAFRLGLIFEAHQCLSDICSSRYKELLAQGVQSMRYSDKNPEQEKAERRRQTPYHMHINLELLEGCHLTAAMLLEVPNMATE----ELSERPRVISRHFRKYMDFFDRQVFTGPPENVRDHVLTAAKSLTTGDWKRCADLILDKMDIWNLIPGENAAQKVKDMLKDKIKCEALRTYLFAYSAHYDSLSLPQLCVMFDLEKRIAHGVISKMMINQEVHASWDQPTETVVLHKVEPTHLQSLALQYAEKASMLVESNERFLDASVGGQSYKDD--WGNRGGGGG 712
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: A0A7S2UU87_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU87_9STRA) HSP 1 Score: 525 bits (1351), Expect = 1.070e-173 Identity = 264/423 (62.41%), Postives = 324/423 (76.60%), Query Frame = 1
Query: 4 YYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDFAKVHPATGRGMPVVEEGQVPDYGAVVQRLCTYVYRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHTDVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQEGGVGTDASRRRVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLGLDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGGYGYRDDKNWGRRSG 1272
YY+HDSIA AV RAQ F+ +G + LHP C + E D HPA+ G P + +PD V + ++YRHGDDR +TRAMLCHI HHA+HDRFH ARDLL MSHLQD+IGHTDV+TQIL+NR MV LGLCAFR G+I E H C+ +VCS R KELLAQGVQ +R+ +++ E+EKAE+RRQMPYHMHINLDLLECCHLTAAMLLEVPN+A + G R++VIS+HFR+ DIY+RQVFTGPPEN RDHV+A+A+ L G+W++ ++LLLGLDVW L+PGEG+AA+VK ML EK++VE LRTYLFTY++HY SLSL +LC MF + K HS++SKMM+ +E+ SWDQP+ET+VLHKVEPS LQ LALQFA+KA+ LVESNERLLDAR GG YR+D WGRR G
Sbjct: 549 YYKHDSIALAVQRAQSFTALWGDRALLHPGCVACTKMEGKL-------DAETCHPASALGTPTCDFSSLPDMAQEVSDMALFIYRHGDDRLRTRAMLCHITHHAMHDRFHQARDLLFMSHLQDTIGHTDVSTQILFNRAMVLLGLCAFRAGMILEGHYCMTEVCSGRTKELLAQGVQQSRYHERNPEKEKAEKRRQMPYHMHINLDLLECCHLTAAMLLEVPNIALDPG------RKKVISRHFRKCRDIYSRQVFTGPPENTRDHVMASAQALEEGQWRQAAKLLLGLDVWNLIPGEGSAAKVKVMLEEKLKVEALRTYLFTYSSHYNSLSLNQLCSMFDMPKPKVHSLLSKMMMAEEIQASWDQPTETVVLHKVEPSPLQQLALQFAEKASFLVESNERLLDARCGGGAYRED--WGRRGG 956
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: A0A7S2HV13_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV13_9STRA) HSP 1 Score: 522 bits (1344), Expect = 6.300e-173 Identity = 270/425 (63.53%), Postives = 325/425 (76.47%), Query Frame = 1
Query: 1 LYYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDFAKVHPATGRGMPVVEEGQVPDYGAVVQRLC-TYVYRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHTDVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQEGGVGTDASRR-RVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLG-LDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGGYGYRDDKNWGRR 1266
+YY HDSIA AV +AQ F+ ++GA SDLHPAC S+ A E D A VHPA+ G P + + ++ D GA +Q C +Y+HGDDR +TRAMLCHI HHA HDRF+ ARDLLLMSHLQ+ IGH DV TQIL+NR MV LGLCAFR GLI + H CL D+CSSRVKELLAQG+Q R+++K+ EQE AERRRQ PYHMHINLDLLE CHLTAAMLLEVPNMA E D S R RVIS+HFR+ +D Y RQVFTGPPEN+RDHV+AAAK L +GEW+KC+EL+L +D+W L+PGE + VK ML EKI+ E LRTYLF Y+AHY+SLSLP+LC+MF ++K+ AH +ISKMMI QEL SWDQP++T+VLHKVEP+HLQ LALQ+ADKA+ LVESNER L+A GG +NW R
Sbjct: 505 VYYMHDSIAAAVFKAQKFAEKWGAYSDLHPACMSSDAGS-----EDGKFDAASVHPASIGGKPTITD-KLEDVGAFIQEQCHRVIYKHGDDRTRTRAMLCHIAHHAAHDRFYEARDLLLMSHLQEHIGHADVHTQILFNRAMVMLGLCAFRAGLIWDAHQCLSDICSSRVKELLAQGLQSMRYSEKNPEQENAERRRQTPYHMHINLDLLEGCHLTAAMLLEVPNMATE-----DVSERPRVISRHFRKHMDFYERQVFTGPPENVRDHVLAAAKALTTGEWKKCTELILDDMDIWNLIPGEKSGEAVKKMLLEKIKAEALRTYLFAYSAHYDSLSLPQLCNMFALEKRTAHGIISKMMINQELHASWDQPTDTVVLHKVEPTHLQALALQYADKASMLVESNERFLEASLGG----GKENWNDR 914
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: A0A7R9W1A8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W1A8_9STRA) HSP 1 Score: 505 bits (1300), Expect = 1.210e-170 Identity = 265/421 (62.95%), Postives = 314/421 (74.58%), Query Frame = 1
Query: 1 LYYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDFAKVHPATGRGMPVVEEGQVP-DYGAVVQRLCTYVYRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHT-DVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQEGGVGTDAS---RRRVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLGLDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGGYGYRDD 1248
LYYRHD+IA V RA +F +G LHPAC SA A + GD K HPA G P V E V D V+ LCTYVYRHG DR KTRAMLCHI HHALHDRF ARDLLLMSHLQD+I + DV+T IL+NRMMVTLGL AFRLG I + H CL DVCS RV+ELLAQGV RF+DK+ EQEKAE+RRQ PYHMH+NLDLLE CHL++AMLLEVPNMA G G +A R RVIS+ FR+ DIY+RQVFTGPPE RD V+ A++ L+ G+W++CS+LL GL+VW LVPGEG+A ++K+ML EKI+VE LRTYLF Y++ Y+SLSL +LC MF + K HSV+SKMMI +EL SWD P+ETIVL VEPS LQ LALQFA++A LVE+NERLLDA++G YGY+DD
Sbjct: 197 LYYRHDTIAEGVDRAALFHETYGEAGLLHPACVSADADDFKG-----NGDAEKCHPAASLGRPSVAEASVTVDSSKVINDLCTYVYRHGSDRSKTRAMLCHIFHHALHDRFLEARDLLLMSHLQDTISNAGDVSTMILFNRMMVTLGLSAFRLGRIWDAHQCLSDVCSGRVRELLAQGVSTGRFSDKTAEQEKAEKRRQTPYHMHVNLDLLEACHLSSAMLLEVPNMAAAGVDGENAPNNRRARVISRTFRKHHDIYDRQVFTGPPEQTRDFVMVASRALLRGDWKRCSDLLGGLEVWALVPGEGSAEKIKSMLAEKIKVEGLRTYLFAYSSRYDSLSLAQLCGMFSLSKNEVHSVVSKMMINRELHASWDGPTETIVLRNVEPSGLQTLALQFAERAGGLVEANERLLDAKSGTYGYKDD 612
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: F0Y6I4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I4_AURAN) HSP 1 Score: 510 bits (1314), Expect = 8.260e-170 Identity = 266/437 (60.87%), Postives = 317/437 (72.54%), Query Frame = 1
Query: 1 LYYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDFAKVHPATGRGMPVVEEGQVPDYGAVVQRLCTYVYRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHTDVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQE-GGVGTDASRRRVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLGLDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGGYGYRDDKNWGRRSGAGGGADWVDRKG 1308
+YY+H+SIA AV AQ + S HP AA AA A + + V D A V++LC YVY HGDDRC+TRA+LCH+ HHALH RF+ ARDLLLMSHLQD+ +DV TQILYNR MV LGLCAFR GLIH+ H CL ++CSSRVKELLAQG+Q RF+DK+ EQEKAERRRQ PYHMHINLDLLECCHLTAAMLLEVPNM+ E GG G +R IS+HFR+ LDI+NRQVFTGPPEN RDHV+ AAK L G+W+ C++L+L LDVW LVPG G RVKAM+ +KI+ E LRTYLF Y++ Y++LSLP+LCDMF + K +AH ++SKMMI +EL G+WDQP+ETIVLH++EPS LQ LAL +ADKAA LVESNERLLDAR GG+GY+D GRR W DR G
Sbjct: 433 MYYKHESIASAVRDAQAYRANERDSSKSHPGAWLGAATAAATAPD---------------------DEVVGDASASVRKLCEYVYAHGDDRCRTRALLCHVAHHALHGRFYVARDLLLMSHLQDTAYMSDVETQILYNRSMVMLGLCAFRNGLIHDAHACLAEICSSRVKELLAQGMQSARFSDKNPEQEKAERRRQTPYHMHINLDLLECCHLTAAMLLEVPNMSVEAGGAG---GHKRPISRHFRKHLDIFNRQVFTGPPENTRDHVLCAAKALGVGDWKTCADLVLRLDVWALVPGAGEGDRVKAMIEDKIKAEALRTYLFAYSSAYDALSLPQLCDMFQLPKNVAHGLVSKMMINRELKGAWDQPTETIVLHRLEPSPLQALALHYADKAAALVESNERLLDARAGGHGYKDGDQQGRR--------WGDRDG 837
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: A0A7S2SSJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSJ9_9STRA) HSP 1 Score: 489 bits (1258), Expect = 3.120e-167 Identity = 255/428 (59.58%), Postives = 321/428 (75.00%), Query Frame = 1
Query: 1 LYYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDFAKVHPATGRGMPVVEEGQVPDYGAVVQRLCTYV-YRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHTDVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQEGGVGTDASRRRVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLG-LDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGGYGYRDDKNWGRRSGAG 1278
LYY+HDSIA AV +AQ+F+ +G+ DLHPAC+ A+ +E + VHPA G PVVE + D+ +V+ L + ++HGD R +TRAMLC + HHALHDRF+ ARDLLLMSH+QD+I +TDV TQIL+NR MV LGLCAFR GLI + H CL DVCSSRV+ELLAQG+Q RF+DK+ EQE+AERRRQ PYHMHINLDLLE CHL +AMLLEVPNMA E VG R R +S+HFR+ +DI RQVFTGPPEN RDHV+ AA+ LM G+W++C+ L+L L+VW L+ GEG A VK MLR+KI+ E LRT+LF Y++HY++L+LP+LC MF ++K+ AH VISKMMI QEL SWDQ +E+IVLH+VEP+HLQ +ALQ+ADK + LVESNER L+A+ G +DD W R G G
Sbjct: 34 LYYKHDSIAYAVGKAQLFADTYGSVGDLHPACKGASKSEDGPV------NSGTVHPAAAAGQPVVEY-DMEDWASVIAALNNQIIFKHGDVRTRTRAMLCQVAHHALHDRFYEARDLLLMSHIQDNIMNTDVHTQILFNRTMVMLGLCAFRAGLIWDAHQCLTDVCSSRVRELLAQGMQSARFSDKNPEQERAERRRQTPYHMHINLDLLEACHLISAMLLEVPNMATEE-VG---ERGRTLSRHFRKHMDIMKRQVFTGPPENTRDHVLVAARALMHGDWKRCASLVLDDLEVWNLIVGEGCAQAVKDMLRKKIKSEALRTFLFAYSSHYDALALPKLCAMFDLEKRAAHGVISKMMINQELHASWDQTTESIVLHRVEPTHLQAVALQYADKVSQLVESNERFLEAQVGTSHGKDD--WNGRGGGG 448
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: A0A7S3XQA8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQA8_HETAK) HSP 1 Score: 484 bits (1247), Expect = 1.100e-166 Identity = 246/384 (64.06%), Postives = 287/384 (74.74%), Query Frame = 1
Query: 148 DFAKVHPATGRGMPVVE---EGQVPDYGAVVQRLCTYVYRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHTDVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQEGGVGTDASRRRVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLGLDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGG---YGYRDDKNWGRRSGAGG 1281
D A HP G P E V D GA V+ YVYRHG DR +TRAMLCHI HHALHDRFH ARDLLLMSHLQD+IGHTDV TQ+L+NRMM LGL AFR G+I E H CL ++CS R KELLAQGVQ ++F+DKS EQEK ERRRQ+PYHMHINLDLLECCHLTAAMLLEVPNMA RR +IS+HFR+ DIY RQVFTGPPEN RDHV+AAA+ + G+W++ + L+ GLDVW L+PGEG RVKAMLR KIQ E LR YLF Y HY +LSLP LC+MFG+D+ AHSV+SKM++ +EL SWDQP+ T+VLH+ EPS LQ LA + ADK LVESNERLL+AR+GG +GY+DD W +R G GG
Sbjct: 1 DAAACHPGAWAGRPRPPSDAESGVEDLGAAVEAQARYVYRHGGDRARTRAMLCHITHHALHDRFHQARDLLLMSHLQDTIGHTDVGTQVLFNRMMALLGLAAFRAGMIREAHACLTELCSGRTKELLAQGVQQSKFSDKSPEQEKEERRRQVPYHMHINLDLLECCHLTAAMLLEVPNMALHPD---RQDRRHIISRHFRKHRDIYGRQVFTGPPENTRDHVMAAAEAMAQGDWRRAAALMEGLDVWNLLPGEGTTDRVKAMLRRKIQREALRAYLFLYGPHYAALSLPLLCEMFGLDRGEAHSVVSKMILTEELAASWDQPTATVVLHRAEPSALQALAAKLADKCGALVESNERLLEARSGGGFAFGYKDD--WRKRGGGGG 379
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Match: A0A6U3ZAQ9_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAQ9_9STRA) HSP 1 Score: 507 bits (1305), Expect = 1.480e-166 Identity = 263/424 (62.03%), Postives = 320/424 (75.47%), Query Frame = 1
Query: 1 LYYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDFAKVHPATGRGMPVVEE---GQVPDYGAVVQRLCTYVYRHGDDRCKTRAMLCHIHHHALHDRFHAARDLLLMSHLQDSIGHT-DVATQILYNRMMVTLGLCAFRLGLIHETHDCLRDVCSSRVKELLAQGVQLNRFADKSTEQEKAERRRQMPYHMHINLDLLECCHLTAAMLLEVPNMAQEGGVGTDASRR-RVISKHFRRFLDIYNRQVFTGPPENIRDHVIAAAKCLMSGEWQKCSELLLGLDVWGLVPGEGAAARVKAMLREKIQVEVLRTYLFTYAAHYESLSLPRLCDMFGVDKKLAHSVISKMMIGQELFGSWDQPSETIVLHKVEPSHLQVLALQFADKAATLVESNERLLDARTGGYGYRDDKNW 1257
LYYRHDSIA V RA F +FG S LHPAC S + D++KVHPA G P VE+ + D ++ LCTYVY+HG DR +TRAMLCHI+HHALHDRF ARDLLLMSHLQD+I DV+T IL+NRMMVTLGL AFRLG I + H CL DVCS RV+ELLAQGV RF+DKS EQEKAE+RRQ+PYH HINLDLLE CHLT+AMLLEVPNMA +SRR RVIS+ FR+ DIY+RQVFTGPPE RD+V+ AAK LM G+W+KCS LL+GLDVW LVPG+ + +++AML +KI++E LRTYLF +++ Y+SLSL +LC MF + K HSV+SKMMI +EL+ SWDQP+ETIVL KVEPS LQV+ALQ+++K A+LVE+NERLLDA++G YGY+D + W
Sbjct: 578 LYYRHDSIATQVDRASKFYERFGEASMLHPACVSDNDTRGSV-------DYSKVHPAASCGKPSVEDTDAAESVDSAKLIADLCTYVYQHGSDRSRTRAMLCHIYHHALHDRFLDARDLLLMSHLQDTISSAGDVSTMILFNRMMVTLGLAAFRLGRIWDAHQCLSDVCSGRVRELLAQGVSTGRFSDKSAEQEKAEKRRQIPYHQHINLDLLEACHLTSAMLLEVPNMAASAEGDAGSSRRTRVISRTFRKNHDIYDRQVFTGPPEQTRDYVMRAAKALMKGDWKKCSNLLVGLDVWKLVPGDDSIEKIRAMLVDKIKLEGLRTYLFAFSSQYDSLSLEQLCGMFELSKNEVHSVVSKMMINRELYASWDQPTETIVLRKVEPSSLQVMALQYSEKVASLVEANERLLDAKSGNYGYKDGEAW 994 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7870.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7870.1.1 >prot_P-wetherbeei_contig7870.1.1 ID=prot_P-wetherbeei_contig7870.1.1|Name=mRNA_P-wetherbeei_contig7870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=485bp LYYRHDSIAGAVHRAQIFSRQFGAPSDLHPACRSAAAAEAAAAVEAAGGDback to top mRNA from alignment at P-wetherbeei_contig7870:1..2918+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7870.1.1 ID=mRNA_P-wetherbeei_contig7870.1.1|Name=mRNA_P-wetherbeei_contig7870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2918bp|location=Sequence derived from alignment at P-wetherbeei_contig7870:1..2918+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7870:1..2918+ >mRNA_P-wetherbeei_contig7870.1.1 ID=mRNA_P-wetherbeei_contig7870.1.1|Name=mRNA_P-wetherbeei_contig7870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1455bp|location=Sequence derived from alignment at P-wetherbeei_contig7870:1..2918+ (Phaeothamnion wetherbeei SAG_119_79)back to top |