mRNA_P-wetherbeei_contig7856.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: D7G6H0_ECTSI (DENN (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H0_ECTSI) HSP 1 Score: 229 bits (584), Expect = 1.760e-59 Identity = 209/600 (34.83%), Postives = 286/600 (47.67%), Query Frame = 2
Query: 2 VLWQYPRNAVLPCSDVANYCFPAGVRVEPLRLHGSMSAFNELLYGSEACERSENSFMFLFSGGIGPDGDGDNESPRRYGACVVFPHLRFASGYDDDSTWSGSDGCNEAAXXXXXXXXXXXGESSLESISFDDLDVDLGDDSDXXXXXXGHGERLMRRRTGSGIGGDTVGSGGGYGGGSIGTLRDNAAVGPARRLSFDRGDTVGGGSCGETGSGGGDCVMQRCYCILSQQPLLELHFKVLWDLLAAERVIRVQAVADAAHRRGGPLSVSDISTAIAATSGQRLRLLRRAARRYLAVRLPAPGSRMRFTVYRTLPEISYLRPLTSR--EGSANLSCGSSSTVAGFSGGSGSSGGSSLRWGALPSFAARECDMLEAVAPWALPPVLSWVPPPILLQALAALLAEVQVVVSGSDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGIPASGLGGGXXXXXXXXGERSPLDLREGQLLLDLDRRELMVGGERAASLARATAGSVTLLPFPGAAQLEERLAPLVAALHPDARNGGGVDGFGFGTRHNNGASGAFGSPERPLYSVNSRQTAAVEVYRATIEDAVSSLCREAHLH 1795
VL YP A LP +V++YCFP GV+ + S S+ N++LY AC+R SF+F+FSG G G+ + R YG CV +P + + + + +GS+ C + GDD D G + SG TV +GG G R P R RG GG G GS G D + CYC+LS+ PL +LHF++LWDLLAAER++R++ A+ RRGG L+ SD A S + LL +RRY+ +PAPG +RF V+ LPEI Y R + G + G ++ GF+ +SLR +P +M++ VA WALP LS +P IL+ + AL+ E QV+V +LGL+S+ VLALAAL RP+ W+ PLVP++P+ M VL APVP+L+G P GGG G R L GQ+LLD D R+++ A A S T LP A L RLAPL L G S E PL+ + Q AA EV +AT+ +S++C A H
Sbjct: 597 VLACYPPEATLP-FNVSDYCFPQGVQATRIDARASQSSLNKVLYQPGACQRGSQSFVFMFSGDHGFRVAGEARNHRTYGVCVTYPKVMPSR----EVSRNGSE-CGRSPQ---------------------------GDDDDEEDKD-GTVLTVAPLAETSGTAPGTVKNGGDENG------RGARGQSPPRTRGGRRGRRGGGYKGG--GSSGADVQVWGCYCLLSRLPLFDLHFQILWDLLAAERIMRMKLTAE---RRGG-LTASDEIAEAALLSNRVEELLLAVSRRYMRQAVPAPGETVRFQVHPDLPEIHYQRGAMAEFHGGHQIKNSGPNNNNVGFAS---YDSFASLRGDCIPPHVKDGREMIDGVAAWALPGTLSLIPVDILVAVVGALMCEYQVIVVSENLGLLSSAVLALAALTRPLLWVHPLVPVMPIDMAEVLSAPVPYLIGTPRLVAGGGG-------GGRVHGPLSPGQVLLDADERKVV--------FAHAEDASRTELPRSRA--LLARLAPLAKVL---------------------GESCVGVKRETPLHLASGSQAAASEVVQATVAAHISAVCTTALRH 1109
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: A0A6H5LDK4_9PHAE (DENN domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDK4_9PHAE) HSP 1 Score: 213 bits (543), Expect = 4.000e-54 Identity = 199/609 (32.68%), Postives = 276/609 (45.32%), Query Frame = 2
Query: 2 VLWQYPRNAVLPCSDVANYCFPAGVRVEPLRLHGSMSAFNELLYGSEACERSENSFMFLFSGGIGPDGDGDNESPRRYGACVVFPHLRFASGYDDDSTWSGSDGCNEAAXXXXXXXXXXXGESSLESISFDDLDVDLGDDSDXXXXXXGHGERLMRRRTGSGIGGDTVGSGGGYGGGSIGTLRDNAAVGPARRLSFDRGDTVGGGSCGETGSGGGDCVMQRCYCILSQQPLLELHFKVLWDLLAAERVIRVQAVADAAHRRGGPLSVSDISTAIAAT-------SGQRLRLLRRAARRYLAVRLPAPGSRMRFTVYRTLPEISYLRPLTSREGSANLSCGSSSTVAGFSGGSGSSGGSSLRWGALPSFAARECDMLEAVAPWALPPVLSWVPPPILLQALAALLAEVQVVVSGSDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGIPASGLGGGXXXXXXXXGERSPLDLREGQLLLDLDRRELMVGGERAASLARATAGSVTLLPFPGAAQLEERLAPLVAALHPDARNGGGVDGFGFGTRHNNGASGAFGSPERPLYSVNSRQTAAVEVYRATIEDAVSSLCREAHLHWDVI 1807
VL +YP A LP +V++YCFP GVR + S S N++LY AC+R SF+F+FSG G G+ + R YG CV +P + + + + SGS + S E+ +G+ + +TV GG G R P RG GG G GS G D + CYC+LS+ PL +LHF++LWDLLAAER++R++ A R P + IS +T + +R+R L Y+ +PAPG +RF V+ LPEI Y R + + S A + +SLR +P +M++ VA WALP LS +P IL+ + AL+ E QV+V DLGL+S+ VLALAAL RP+ W+ PLVP++P+ M VL APVP+L+G P L G G SP GQ+LLD D ++++ ARA S T LP A L RLAPL L G S E PL+ + Q AA EV +AT+ +S++C A H + I
Sbjct: 1032 VLARYPPEATLP-FNVSDYCFPQGVRATKIDARASQSNLNKVLYQPGACQRGSQSFVFMFSGDHGFRVAGEARNHRTYGVCVTYPKVIASREVGRNESESGSSPQGDDVGEEDKNGTALTAAPSAET-------------------------------SGTAVTPETVKRGGDEKG------RGAQGQSPPHTRGGRRGRRGGGYKGG--GSNGADVQVWGCYCLLSRLPLFDLHFQILWDLLAAERIMRMKVRAP----RYRPAPTAGISRRYRSTLQPTPYVTARRMRQL------YMQQAVPAPGETVRFQVHPDLPEIHYQRGAMAEFHGGHQIKNSGVGFASYD------SFASLRGDRIPPHVKDGREMIDGVAAWALPGTLSLIPFDILVAVVGALMCEYQVIVVSEDLGLLSSAVLALAALTRPLLWVHPLVPVMPIDMAEVLSAPVPYLIGTPR--LVAGAEGRGRVHGPLSP-----GQVLLDADEKKVV--------FARAEDASRTELPRSRA--LLARLAPLAKVL---------------------GESCVGVKRETPLHLASGSQAAASEVVQATVAAHISAVCTTALRHREEI 1546
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: A0A7S3XJI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJI2_HETAK) HSP 1 Score: 107 bits (267), Expect = 5.180e-21 Identity = 101/325 (31.08%), Postives = 153/325 (47.08%), Query Frame = 2
Query: 854 LRRAARRYLAVRLPAPGSRMRFTVYRTLPEISYLRPLTSREGSANLSCGSSSTVAGFSGGSGSSGGSSLRWGALPSFAARECDMLEAVAPWALPPVLSWVPPPILLQALAALLAEVQVVVSGSDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGIPASGLGGGXXXXXXXXGERSPLDLREGQLLLDLDRRELMVGGERAASLARATAGSVTLLPFPGAAQLEERLAPLVAALHPDARNGGGVDGFGFGTRHNNGASGAFGSPERPLYSVNSRQTAAVEVYRATIEDAVSSLCREAHLHWDVIKHAHATA 1828
LRR RYLA+++P PG+ + F V LP + + RP + + + + + S+R + +EAV+ W L ++SW+P +L + AL+ E+QV+V G DLGL+SA L LA+LLRP+ W+GPL+P+LP M G LDAPVPFL G+P G +P +E ++LDL R +G E R A L P + L L PLVA L D+ GG + P++PLY+ + + A + ++ + + LC +A + AH+TA
Sbjct: 2 LRRLGERYLALQVPRPGAGLAFAVDEDLPPVRFHRPYAASWEVKDRTVDNVFELI-----------KSIR-------CQGGYEDVEAVSQWCLSVLVSWLPTRTILWMVGALMCEMQVIVVGEDLGLLSACTLGLASLLRPLLWVGPLIPVLPSKMHGYLDAPVPFLAGVPRLPEG------------HAP---QETSVVLDLRTRTTSLGEED-----RGRAAGYVL---PRISALLRDLRPLVAVLQEDS--GGKL-------------------PKQPLYNPSIKHLTAADSFQHIVRTHIEGLCAQAM----EVHEAHSTA 260
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: F0YAW2_AURAN (UDENN domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAW2_AURAN) HSP 1 Score: 86.7 bits (213), Expect = 9.050e-14 Identity = 104/337 (30.86%), Postives = 134/337 (39.76%), Query Frame = 2
Query: 644 GDCVMQRCYCILSQQPLLELHFKVLWDLLAAERVIRVQAVADAAHRRGGPLSVSDISTAIAATSGQRLRLLRRAARRYLAVRLPAPGSRMRFTVYRTLPEISYLRPLTSREGSANLSCGSSSTVAGFSGGSGSSGGSSLRWGALP-----------SFAARECDMLEAVAPWALPPVLSWVPPPILLQALAALLAEVQVVVSGSDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGIPASGLGGGXXXXXXXXGERSPLDLREGQLLLDLDRRELMVGGERAASLARATAGSVTLLPFPGAAQLEERLAPLVAALH----PDA 1609
G + R C+L++ PLL+LH VL D LA R R + +A LRR RY AV P PG F +RP + G GA P ++ A E ++A A WA+P +L +P LL+ALA L E+QVVV D +A VL LAAL RP+ W+GPLVP+LP + +L+APVPFL+G P + ER P + G +LD D L A LL P A L + LAPLV A PDA
Sbjct: 312 GSFAVPRATCLLTRLPLLDLHAAVLRDALAVARRSRDRHLA-----------------------------LRRVFGRYAAVEAPKPGMPAAFAADPAAEPRRGVRPAATT-------------------------GLDFLRGARPVDLPDAVAPHMAWTAAEYAAVDATAHWAVPRLLRLLPLHTLLRALAGALCEMQVVVISRDPARGAAAVLGLAALARPLLWVGPLVPVLPAQLHALLEAPVPFLVGAPRT------ETWARCIAERLP---KPGFFVLDADDGGLCFHPHDA-----------DLLELPHADALADALAPLVEAARGADAPDA 574
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: A0A7S2G622_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G622_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 4.580e-12 Identity = 49/104 (47.12%), Postives = 68/104 (65.38%), Query Frame = 2
Query: 1052 SSLRWGALPSFAARECDMLEAVAPWALPPVLSWVPPPILLQALAALLAEVQVVVSGSDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGI 1363
SS+ W ARE + A WA+PP+L+W+ L + LA LL+E +VVV G + G+ SA VL LAALLRPV W+ P +PLLP S++ +L+AP+ LLG+
Sbjct: 41 SSMAW------VAREWAAVFATQSWAVPPLLAWLDGSTLTRTLALLLSEYKVVVVGKEAGVCSAVVLGLAALLRPVLWVYPAIPLLPKSLSTMLEAPMSVLLGV 138
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: A0A397CNT2_9STRA (UDENN domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CNT2_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.210e-7 Identity = 39/86 (45.35%), Postives = 62/86 (72.09%), Query Frame = 2
Query: 1124 WALPPVLSWVPPPILLQALAALLAEVQVVVSGSDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGIPASGLG 1381
W+LP VL+ + +LQ +AALL E++V+V D+ L++ATVL + +LL P+ W GPL+ +LP S++ L+APVPF++G+ A +G
Sbjct: 25 WSLPIVLTSMTMDSVLQTIAALLLEMKVLVVCDDIELLTATVLGVVSLLAPLVWTGPLIAVLPSSLSEYLEAPVPFVIGVQALPVG 110
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: W4GG93_9STRA (UDENN domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GG93_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.830e-7 Identity = 39/86 (45.35%), Postives = 62/86 (72.09%), Query Frame = 2
Query: 1124 WALPPVLSWVPPPILLQALAALLAEVQVVVSGSDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGIPASGLG 1381
W+LP VL+ + +LQ +AALL E++V+V D+ L++ATVL + +LL P+ W GPL+ +LP S++ L+APVPF++G+ A +G
Sbjct: 426 WSLPIVLTSMTMDSVLQTIAALLLEMKVLVVCDDIELLTATVLGVVSLLAPLVWTGPLIAVLPSSLSEYLEAPVPFVIGVQALPVG 511
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: A0A418FL32_9STRA (UDENN domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FL32_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.230e-7 Identity = 39/86 (45.35%), Postives = 62/86 (72.09%), Query Frame = 2
Query: 1124 WALPPVLSWVPPPILLQALAALLAEVQVVVSGSDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGIPASGLG 1381
W+LP VL+ + +LQ +AALL E++V+V D+ L++ATVL + +LL P+ W GPL+ +LP S++ L+APVPF++G+ A +G
Sbjct: 326 WSLPIVLTSMTMDSVLQTIAALLLEMKVLVVCDDIELLTATVLGVVSLLAPLVWTGPLIAVLPSSLSEYLEAPVPFVIGVQALPVG 411
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: A0A7S2SUL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUL5_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.200e-7 Identity = 52/149 (34.90%), Postives = 79/149 (53.02%), Query Frame = 2
Query: 1148 WVPPPILLQALAALLAEVQVVVSG--SDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGIPASGLGGGXXXXXXXXGERSPLD-----------------LREGQLLLDLDRRELMVGGERAASLARATAGSVTL 1537
W+ +LL++L ALLAE+++VV+G GL+++TVL L ALL PV W+ P+VPLLP S+ +LD+P+P ++G + E LD R G +LDL+RR L++ + +AR GS+ L
Sbjct: 1 WLDSQVLLESLGALLAELKLVVAGPYDQPGLITSTVLGLVALLDPVLWVYPIVPLLPASLQELLDSPIPMVVGWGLTAPSESQILREDLVDEYPCLDPSKDAGHAQVLLEERLVCRPGVAILDLERRRLLLHAD---DVARVPQGSLLL 146
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Match: A0A1V9YWM7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWM7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 8.050e-6 Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 2
Query: 1124 WALPPVLSWVPPPILLQALAALLAEVQVVVSGSDLGLVSATVLALAALLRPVPWLGPLVPLLPLSMTGVLDAPVPFLLGI 1363
WALP V++ + LL L+ LL E++VVV + ++ATVLALA+LL P+ W GP+V +LP + L+APVP+L+G+
Sbjct: 372 WALPTVMATLSIETLLSGLSCLLVELKVVVVCDHMETLTATVLALASLLAPLTWAGPVVAVLPSILLEYLEAPVPYLIGV 451 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7856.1.1 >prot_P-wetherbeei_contig7856.1.1 ID=prot_P-wetherbeei_contig7856.1.1|Name=mRNA_P-wetherbeei_contig7856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=678bp MSAFNELLYGSEACERSENSFMFLFSGGIGPDGDGDNESPRRYGACVVFPback to top mRNA from alignment at P-wetherbeei_contig7856:2..2259+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7856.1.1 ID=mRNA_P-wetherbeei_contig7856.1.1|Name=mRNA_P-wetherbeei_contig7856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2258bp|location=Sequence derived from alignment at P-wetherbeei_contig7856:2..2259+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7856:2..2259+ >mRNA_P-wetherbeei_contig7856.1.1 ID=mRNA_P-wetherbeei_contig7856.1.1|Name=mRNA_P-wetherbeei_contig7856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2034bp|location=Sequence derived from alignment at P-wetherbeei_contig7856:2..2259+ (Phaeothamnion wetherbeei SAG_119_79)back to top |