mRNA_P-wetherbeei_contig7840.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: A0A7S2UT53_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT53_9STRA) HSP 1 Score: 207 bits (528), Expect = 4.230e-62 Identity = 103/147 (70.07%), Postives = 124/147 (84.35%), Query Frame = 1
Query: 1 PPSISRAHLAVRSEHFRAMLYGGMRESSSGDVEIRDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIMRT 441
P SRAHLAVRSEHFRAMLYGGMRES S ++EI+D+S VFLK+LEFLYTD V DI ++AVQLLMASEQYLLDRLKALCED IRK I+VDN++ + + AH+HRAEGLKEIGL+F+LD +++VK + F LK EPDLLMEIIM++
Sbjct: 77 PVYASRAHLAVRSEHFRAMLYGGMRESQSEEIEIKDVSHPVFLKMLEFLYTDTVEDIPYEIAVQLLMASEQYLLDRLKALCEDSIRKSITVDNVISVFMAAHRHRAEGLKEIGLEFILDHLEDVKMSTGFQLLKAEPDLLMEIIMKS 223
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: A0A835YYB0_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB0_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.580e-56 Identity = 100/146 (68.49%), Postives = 123/146 (84.25%), Query Frame = 1
Query: 1 PPSISRAHLAVRSEHFRAMLYGGMRESSSG-DVEIRDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIM 435
P SRAHLA RSEHFRAMLYGG+RES +G ++E++D+S AVFLK+LE+LYTD V D+ PDLAVQLLMASE+YLLDRLKALCE+ IRK ++V+N+VG+ L AHKH AEGLKEI LD++LD ++ VK T +F +LK EPDLL EIIM
Sbjct: 364 PVFASRAHLAARSEHFRAMLYGGLRESQAGCEIEVKDVSHAVFLKMLEYLYTDTVGDLAPDLAVQLLMASERYLLDRLKALCEESIRKGVTVENVVGVFLTAHKHNAEGLKEICLDYILDNLEAVKGTQSFNELKSEPDLLFEIIM 509
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: D7G0Q0_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Q0_ECTSI) HSP 1 Score: 197 bits (501), Expect = 6.660e-55 Identity = 102/149 (68.46%), Postives = 120/149 (80.54%), Query Frame = 1
Query: 1 PPSISRAHLAVRSEHFRAMLYGGMRESSSG-DVEIRDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIMRTA 444
P SR HLA+RSEHFRAMLYGGMRES G ++EI+D+S AVFLKLLE+LYTD ++D+T + AV LL+ASEQYLL RLK LCE+ IR I+VD + I L+AHKH AEGLKEI LDFVLD M+ VK TA F++LKQEPDLLMEII R A
Sbjct: 349 PVYASRVHLALRSEHFRAMLYGGMRESEKGAEIEIKDVSHAVFLKLLEYLYTDTLSDVTANQAVHLLVASEQYLLARLKTLCEEAIRTSITVDTVCTIFLLAHKHNAEGLKEIALDFVLDNMEGVKDTAGFLELKQEPDLLMEIIFRQA 497
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: A0A7S1U372_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U372_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.940e-52 Identity = 90/146 (61.64%), Postives = 121/146 (82.88%), Query Frame = 1
Query: 1 PPSISRAHLAVRSEHFRAMLYGGMRESSSGDVEIRDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIMR 438
P +RAHLA RSEHFRAMLYGGMRE+++ +++I D+S VFLKLLE+LYTDQV +++ + AV LL+A+EQYLLDRLK +CED IRK I+ +N++GI + AH+H A+GL+EIGL+F+L ++EVK+T F +LK EP+LLMEIIMR
Sbjct: 363 PVYATRAHLAARSEHFRAMLYGGMREANAEEIQIHDVSHDVFLKLLEYLYTDQVEELSAETAVALLIAAEQYLLDRLKGICEDTIRKSIAAENVIGIFMAAHRHNAQGLREIGLEFILANLEEVKRTKGFQELKDEPELLMEIIMR 508
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: A0A7R9UG27_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG27_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.510e-47 Identity = 84/146 (57.53%), Postives = 113/146 (77.40%), Query Frame = 1
Query: 1 PPSISRAHLAVRSEHFRAMLYGGMRESSSGDVEIRDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIMR 438
P +RAHLA R EHFRAMLYG MRE+SS ++ I D+ FLKLLE+LYTDQV D+T + A LL+A+EQYLL+RLK +CE IIR+ I+V+N++GI + AH+H A L+EI L+++L +++VK+T F +LK EP+LLMEIIMR
Sbjct: 90 PIYATRAHLAARCEHFRAMLYGEMREASSEEIVIHDIRHDTFLKLLEYLYTDQVEDLTAESATPLLIAAEQYLLERLKGICEGIIRQSITVENVIGIFMAAHRHNALRLREIVLEYILANLEDVKRTRHFQELKDEPELLMEIIMR 235
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: A0A7S1A9A8_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A9A8_NOCSC) HSP 1 Score: 173 bits (438), Expect = 1.340e-45 Identity = 88/148 (59.46%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 1 PPSISRAHLAVRSEHFRAMLYGGMRESSSGDVEI--RDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIMR 438
P +RAHLA RSEHFRA+ YGGMRESS + +I D++ VFL LLE++YTDQV DI DLAV LL+A+E++LLDRLKALCEDIIRK IS+DN+V I++ A HRAEGLK+I +DF++ +++K T AF +L QEP L+ E++MR
Sbjct: 365 PVYATRAHLAARSEHFRALFYGGMRESSGTEEQIVLPDIAHPVFLLLLEYIYTDQVGDINSDLAVHLLIAAERFLLDRLKALCEDIIRKCISIDNVVQIMMAAKAHRAEGLKDICMDFIISNEEKIKTTPAFRELIQEPTLMYELLMR 512
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: A0A812K7F3_9DINO (Lztr1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812K7F3_9DINO) HSP 1 Score: 170 bits (431), Expect = 1.220e-44 Identity = 84/144 (58.33%), Postives = 116/144 (80.56%), Query Frame = 1
Query: 13 SRAHLAVRSEHFRAMLYGGMRESSSGDVEI--RDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIMR 438
+RAHLA RSEHFRA+ YGGMRESS + +I +D++ VFL LLE++YTDQV +I+ +LAV LL+A+E++LLDRLKALCEDIIRK IS+DN+V I++ A HRA+GLK+I +DF++ +++K T AF +L QEP L+ E++MR
Sbjct: 365 TRAHLAARSEHFRALFYGGMRESSDAEEQIVLQDVAHPVFLLLLEYIYTDQVGEISSELAVHLLIAAERFLLDRLKALCEDIIRKSISIDNVVQIMMTAKAHRADGLKDICMDFIITNEEKIKPTPAFKELIQEPTLMYELLMR 508
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: A0A6U6MZ52_9DINO (Hypothetical protein n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A6U6MZ52_9DINO) HSP 1 Score: 167 bits (422), Expect = 2.540e-43 Identity = 84/145 (57.93%), Postives = 115/145 (79.31%), Query Frame = 1
Query: 13 SRAHLAVRSEHFRAMLYGGMRESSSGDVE---IRDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIMR 438
+RAHLA RSEHFRA+LYGGMRESSS E I D+S +VFL LLE++YTDQ++D+ +AV LL+A+E++LLDRLKALCEDIIRK IS++N+V +++ A HRAEGLK+I +DF++ +++K T AF +L EP L+ E++MR
Sbjct: 369 TRAHLASRSEHFRALLYGGMRESSSTSQEPIVIPDISHSVFLLLLEYIYTDQISDVGSKMAVPLLIAAERFLLDRLKALCEDIIRKSISIENVVQVMMTAKVHRAEGLKDICMDFIVTNEEKIKTTPAFRELIAEPTLMYELLMR 513
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: A0A7S2WPN5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPN5_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.140e-41 Identity = 82/141 (58.16%), Postives = 102/141 (72.34%), Query Frame = 1
Query: 13 SRAHLAVRSEHFRAMLYGGMRESSSGDVEIRDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIM 435
SR HLA RSEHFRAML+GGMRESSSG++E+ LS AVF+K+LEFLYTD V DI PD+AV LL+A+EQYLL+RLK LCED IR+ +SV N F+L+ ++E+KQ AF+DLK EP+LLMEI+M
Sbjct: 384 SRIHLAARSEHFRAMLFGGMRESSSGEIELPGLSHAVFIKILEFLYTDTVTDIPPDVAVPLLIAAEQYLLERLKGLCEDYIRRGVSVGNAXXXXXXXXXXXXXXXXXXXXXFILEHLEEIKQEPAFLDLKSEPELLMEILM 524
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Match: B8C0A8_THAPS (BTB domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0A8_THAPS) HSP 1 Score: 156 bits (395), Expect = 1.600e-39 Identity = 80/156 (51.28%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 13 SRAHLAVRSEHFRAMLYGGMRESSSGD-------VEIRDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMASEQYLLDRLKALCEDIIRKRISVDNIVGILLMAHKHRAEGLKEIGLDFVLDKMDEVKQTAAFMDLKQEPDLLMEIIMRTARK*SS 459
+RA LAVRSE+F ML+GGMRES D +E++D+S AVF K++E+LYTD V+D++ D+++ L++ASEQ++LDRLKALCED IRK I+VDN++G+L+ + +H A GLK+I L+F+L + + A +LK EPDLL+EII R + SS
Sbjct: 330 NRALLAVRSEYFDVMLFGGMRESMRDDAGNTNEPIELQDVSYAVFTKVIEYLYTDTVSDLSWDISIPLMIASEQFMLDRLKALCEDSIRKEITVDNVIGVLIASQRHNATGLKDIALEFILRNIMDPSVVAGLSELKSEPDLLVEIITRHSHTQSS 485 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7840.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7840.2.2 >prot_P-wetherbeei_contig7840.2.2 ID=prot_P-wetherbeei_contig7840.2.2|Name=mRNA_P-wetherbeei_contig7840.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp MLYGGMRESSSGDVEIRDLSRAVFLKLLEFLYTDQVADITPDLAVQLLMAback to top mRNA from alignment at P-wetherbeei_contig7840:1038..2806- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7840.2.2 ID=mRNA_P-wetherbeei_contig7840.2.2|Name=mRNA_P-wetherbeei_contig7840.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1769bp|location=Sequence derived from alignment at P-wetherbeei_contig7840:1038..2806- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7840:1038..2806- >mRNA_P-wetherbeei_contig7840.2.2 ID=mRNA_P-wetherbeei_contig7840.2.2|Name=mRNA_P-wetherbeei_contig7840.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig7840:1038..2806- (Phaeothamnion wetherbeei SAG_119_79)back to top |