mRNA_P-wetherbeei_contig7837.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: A0A7S2WUK5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUK5_9STRA) HSP 1 Score: 240 bits (612), Expect = 2.660e-69 Identity = 140/240 (58.33%), Postives = 163/240 (67.92%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVAAFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGILVGVQFARWLGGDGSGGDYGSCGGDGGIDVGVLGGTGGRHAFGAWGMFLLLTALHVYANHCGVSALNLTTVNEQRARIL 720
SVR EY YQFWDTVQAL SYLRG+ ST AVL + GVG ASALAAA+ WVLRDG GM GSL F + GG D+ +K WRLFAD+INDVGL+LDML+P A L + +SL TVCKAMCGVAAG TKASITAH+ALR N ADV+AKESAQETAVTL+GI++GV AR G++ +G A W MFL+LT LH+ AN GV AL LT++N R IL
Sbjct: 24 SVRPEYLEYQFWDTVQALTSYLRGIFSTRAVLVSVGVGNESASALAAAITWVLRDGAGMLGSLFFGYWCGGSFDSFLKEWRLFADLINDVGLLLDMLSPHLAADLVLPV-ASLATVCKAMCGVAAGSTKASITAHMALRGNNADVAAKESAQETAVTLVGIILGVLLAR------------------GLEPSESSASGVETATAVWAMFLVLTVLHIVANFFGVRALRLTSLNRHRVDIL 244
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: W7U4R7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4R7_9STRA) HSP 1 Score: 233 bits (594), Expect = 9.130e-66 Identity = 131/241 (54.36%), Postives = 162/241 (67.22%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVAAFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGILVGVQFARWLGGDGSGGDYGSCGGDGGIDVGVLGGTGGRHAFGAWGMFLLLTALHVYANHCGVSALNLTTVNEQRARILV 723
SVREEY TYQ WDTVQALCSYLRG+L+T A+L+ +GVG ASAL+AA+ WV RDG GMA SL+F+ D ++K WRLFAD+ NDVGL LDML + + + H +++ L TVCK MCGVAAGCTK+SITAH +LR N ADVSAKE+AQETAVTL GI+ G+ A+W+ +C AW +FL LTALHV AN+ GV AL L ++N QRA IL+
Sbjct: 71 SVREEYLTYQIWDTVQALCSYLRGILTTKAILEGSGVGSEAASALSAAMNWVFRDGVGMACSLLFSSMASISFDCNVKEWRLFADISNDVGLTLDMLTGLPSLKGHFLLLTCLSTVCKTMCGVAAGCTKSSITAHFSLRGNIADVSAKENAQETAVTLFGIVGGLLCAQWI----------AC------------------PETAWPVFLSLTALHVLANYKGVVALKLYSLNTQRAAILI 283
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: D7FQ06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ06_ECTSI) HSP 1 Score: 219 bits (558), Expect = 2.410e-63 Identity = 114/171 (66.67%), Postives = 140/171 (81.87%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVAAFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGILVGVQFARWL 513
SVR+EY YQ WDTVQALCSYLRGVL A+L A+GVG+ ASA+AAA+VWVLRDGFGM GSL+F++A MD++IK WRLFAD+ NDVGL LD++APV FR + A+VSSL TV KA+CGVAAGCTK SIT+H AL+ N AD+SAKE+AQETAV + G+L+GV+ A +L
Sbjct: 79 SVRKEYMEYQTWDTVQALCSYLRGVLCLTAMLHASGVGDENASAIAAAMVWVLRDGFGMIGSLLFSYAASSHMDSNIKEWRLFADIANDVGLTLDLVAPV--FRGNFAVVSSLATVFKALCGVAAGCTKTSITSHFALKQNMADISAKENAQETAVNVCGMLLGVKVASYL 247
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: R1DHG9_EMIHU (Uncharacterized protein (Fragment) n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DHG9_EMIHU) HSP 1 Score: 215 bits (547), Expect = 8.750e-62 Identity = 129/238 (54.20%), Postives = 153/238 (64.29%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVAAFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGILVGVQ-FARWLGGDGSGGDYGSCGGDGGIDVGVLGGTGGRHAFGAWGMFLLLTALHVYANHCGVSALNLTTVNEQRA 711
SVR EY +Q +DT+QA CSYLR +LST A+L A+GVGE AS +AAAV WVLRDGFGM GSL+FA VG D ++K WRLFAD+INDVGL L+MLAP+A R L V++LG+ C ++CG+ AG T+ASITAH AL N ADVSAKE AQETAVTL+G+LVG FA +G A W F LLTALHVYAN GV L L +N RA
Sbjct: 67 SVRPEYIRFQVYDTIQAACSYLRAILSTGAILKASGVGEAAASPMAAAVAWVLRDGFGMCGSLLFASLVGVGFDENVKEWRLFADLINDVGLTLNMLAPMAGERFFL--VAALGSTCTSICGMVAGATRASITAHFALSGNLADVSAKEGAQETAVTLVGLLVGSYLFAPLVG---------------------------ESAPAVWTAFALLTALHVYANWQGVGCLALLWLNRHRA 275
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: A0A7S2JJT8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JJT8_9EUKA) HSP 1 Score: 216 bits (549), Expect = 2.780e-61 Identity = 123/242 (50.83%), Postives = 157/242 (64.88%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVA--AFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGILVGVQFARWLGGDGSGGDYGSCGGDGGIDVGVLGGTGGRHAFGAWGMFLLLTALHVYANHCGVSALNLTTVNEQRARIL 720
SVR EY +Q +DT+QA CSYLR +L+T+A+L AGVG+ AS +AAA+ WVLRDG GM GSL+F++ VG D ++K WRLFAD+IND+GL LDMLAP+A A + +V++LG CK +CG+ AG T+ASIT H ALR N ADVSAKE AQETAVTL+G+LVG A LG +W F++LT +HV+AN GV L LTT+N QRA I+
Sbjct: 85 SVRPEYLQFQAFDTLQAACSYLRNILTTSAILRGAGVGKDAASPMAAAIAWVLRDGVGMFGSLVFSYLVGTGFDRNVKEWRLFADIINDLGLTLDMLAPLAGPAGGTNFMVVAALGACCKTICGMTAGATRASITNHFALRNNLADVSAKEGAQETAVTLVGLLVGGALANRLG---------------------------DSPMTSWAAFIILTLVHVWANCVGVGCLALTTLNRQRAAIV 299
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: A0A7S2CTD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTD9_9STRA) HSP 1 Score: 209 bits (532), Expect = 2.330e-60 Identity = 110/162 (67.90%), Postives = 128/162 (79.01%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVAAFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGIL 486
SVR EY TYQ WDTVQALCSYLRG+ ST AVL + GVG+ ASA++AAV W+LRDG GM GSL+ ++ G DA +K WRLFADVINDVGL LDMLAP R++ +V LGTVCKAMCGV+AG TK+SITAH+AL NTADV+AKE+AQET VTL GIL
Sbjct: 25 SVRPEYLTYQIWDTVQALCSYLRGIFSTRAVLVSVGVGDSNASAMSAAVTWILRDGAGMVGSLLLSYGAGSSFDAHLKEWRLFADVINDVGLTLDMLAPHTP-RRYFGLVLGLGTVCKAMCGVSAGATKSSITAHMALTGNTADVAAKENAQETFVTLCGIL 185
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: A0A7S3WC01_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WC01_EMIHU) HSP 1 Score: 215 bits (547), Expect = 5.250e-60 Identity = 129/238 (54.20%), Postives = 153/238 (64.29%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVAAFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGILVGVQ-FARWLGGDGSGGDYGSCGGDGGIDVGVLGGTGGRHAFGAWGMFLLLTALHVYANHCGVSALNLTTVNEQRA 711
SVR EY +Q +DT+QA CSYLR +LST A+L A+GVGE AS +AAAV WVLRDGFGM GSL+FA VG D ++K WRLFAD+INDVGL L+MLAP+A R L V++LG+ C ++CG+ AG T+ASITAH AL N ADVSAKE AQETAVTL+G+LVG FA +G A W F LLTALHVYAN GV L L +N RA
Sbjct: 49 SVRPEYLRFQVYDTIQAACSYLRAILSTGAILKASGVGEAAASPMAAAVAWVLRDGFGMCGSLLFASLVGVGFDENVKEWRLFADLINDVGLTLNMLAPMAGERFFL--VAALGSTCTSICGMVAGATRASITAHFALSGNLADVSAKEGAQETAVTLVGLLVGSYLFAPLVG---------------------------ESAPAVWTAFALLTALHVYANWQGVGCLALLWLNRHRA 257
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: A0A7S3WBE0_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WBE0_EMIHU) HSP 1 Score: 215 bits (547), Expect = 9.110e-60 Identity = 129/238 (54.20%), Postives = 153/238 (64.29%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVAAFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGILVGVQ-FARWLGGDGSGGDYGSCGGDGGIDVGVLGGTGGRHAFGAWGMFLLLTALHVYANHCGVSALNLTTVNEQRA 711
SVR EY +Q +DT+QA CSYLR +LST A+L A+GVGE AS +AAAV WVLRDGFGM GSL+FA VG D ++K WRLFAD+INDVGL L+MLAP+A R L V++LG+ C ++CG+ AG T+ASITAH AL N ADVSAKE AQETAVTL+G+LVG FA +G A W F LLTALHVYAN GV L L +N RA
Sbjct: 49 SVRPEYLRFQVYDTIQAACSYLRAILSTGAILKASGVGEAAASPMAAAVAWVLRDGFGMCGSLLFASLVGVGFDENVKEWRLFADLINDVGLTLNMLAPMAGERFFL--VAALGSTCTSICGMVAGATRASITAHFALSGNLADVSAKEGAQETAVTLVGLLVGSYLFAPLVG---------------------------ESAPAVWTAFALLTALHVYANWQGVGCLALLWLNRHRA 257
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: A0A7R9UTE8_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UTE8_DIALT) HSP 1 Score: 209 bits (532), Expect = 1.010e-59 Identity = 111/162 (68.52%), Postives = 130/162 (80.25%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVAAFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGIL 486
SVR EYATYQ +DT+QALCSYLRG+L+T A+L+A+GVG AS LAAAV WVLRDGFGM GSLIFA+ VG R D +K WRLFAD+INDVGL LDM+AP+ R L ++S G +CK MCGVAAG T+ASITAH ALR N ADVS KE AQETAV+L+G+L
Sbjct: 64 SVRPEYATYQLYDTLQALCSYLRGILTTTAILEASGVGNETASPLAAAVAWVLRDGFGMLGSLIFAFCVGSRFDGGVKEWRLFADLINDVGLSLDMVAPLLPHRVLL--LTSCGAMCKTMCGVAAGATRASITAHFALRDNLADVSTKEGAQETAVSLVGLL 223
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Match: A0A8J6CEJ6_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CEJ6_DIALT) HSP 1 Score: 214 bits (544), Expect = 1.360e-59 Identity = 131/248 (52.82%), Postives = 160/248 (64.52%), Query Frame = 1
Query: 1 SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVWVLRDGFGMAGSLIFAWAVGGRMDADIKAWRLFADVINDVGLMLDMLAPVAAFRQHLAIVSSLGTVCKAMCGVAAGCTKASITAHLALRANTADVSAKESAQETAVTLIGILVGVQFARWLGGDGSGGDYGSCGGDGGIDVGVLGGTGGRHAFGAWG--MFLLLTALHVYANHCGVSALNLTTVNEQRARILVAAFAH 738
SVR EYATYQ +DT+QALCSYLRG+L+T A+L+A+GVG AS LAAAV WVLRDGFGM GSLIFA+ VG R D +K WRLFAD+INDVGL LDM+AP+ R L ++S G +CK T+ASITAH ALR N ADVS KE AQETAV+L+G+LVG+ AR + H A +F LLTA+HV AN+ GV +L L ++N QRA +LV A A+
Sbjct: 57 SVRPEYATYQLYDTLQALCSYLRGILTTTAILEASGVGNETASPLAAAVAWVLRDGFGMLGSLIFAFCVGSRFDGGVKEWRLFADLINDVGLSLDMVAPLLPHRVLL--LTSCGAMCKTXXXXXXXATRASITAHFALRDNLADVSTKEGAQETAVSLVGLLVGLALARAV-----------------------------HLSHARARLLFALLTAVHVLANYRGVRSLCLCSLNAQRAALLVDAVAN 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7837.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7837.1.2 >prot_P-wetherbeei_contig7837.1.2 ID=prot_P-wetherbeei_contig7837.1.2|Name=mRNA_P-wetherbeei_contig7837.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=595bp SVREEYATYQFWDTVQALCSYLRGVLSTAAVLDAAGVGEGGASALAAAVVback to top mRNA from alignment at P-wetherbeei_contig7837:316..2966+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7837.1.2 ID=mRNA_P-wetherbeei_contig7837.1.2|Name=mRNA_P-wetherbeei_contig7837.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2651bp|location=Sequence derived from alignment at P-wetherbeei_contig7837:316..2966+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7837:316..2966+ >mRNA_P-wetherbeei_contig7837.1.2 ID=mRNA_P-wetherbeei_contig7837.1.2|Name=mRNA_P-wetherbeei_contig7837.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1785bp|location=Sequence derived from alignment at P-wetherbeei_contig7837:316..2966+ (Phaeothamnion wetherbeei SAG_119_79)back to top |