mRNA_P-wetherbeei_contig7830.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: D7FLK5_ECTSI (Alpha-galactosidase N-terminal, family GH36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK5_ECTSI) HSP 1 Score: 201 bits (511), Expect = 1.060e-60 Identity = 93/140 (66.43%), Postives = 113/140 (80.71%), Query Frame = 1
Query: 1 GAAFISLRAAPDKSPTRTWRLGVPRATKLLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDDATGRRLFALFVPLIDGPVKCSLKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKSFRLVNNRL 420
GAAFISLRAA D +PTRTW +G P AT ++AL RFKLWWM P H + ++IPPETQ++LT+LPPD TGR+L+ LF+PLIDG KC+LKGL D+ LQL AETGC T VPS+D+AGL+V V +DPF LVEKSF+LVN RL
Sbjct: 197 GAAFISLRAANDGAPTRTWNVGRPNATSMMALARFKLWWMMPKHTTKANEIPPETQMMLTKLPPDPETGRQLYGLFIPLIDGQAKCNLKGLPDRSLQLFAETGCPNTPVPSSDVAGLYVGVDEDPFKLVEKSFKLVNARL 336
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: A0A6H5JFU4_9PHAE (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU4_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.600e-57 Identity = 92/140 (65.71%), Postives = 113/140 (80.71%), Query Frame = 1
Query: 1 GAAFISLRAAPDKSPTRTWRLGVPRATKLLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDDATGRRLFALFVPLIDGPVKCSLKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKSFRLVNNRL 420
GAAFISLRA D++PTRTW +G P AT ++AL RFKLWWM P H + ++IPPETQ++LT+LPPD TGR+L+ LF+PLIDG KC+LKGL D+ LQL AETGC T VPS+D+AGL+V V +DPF LVEKSF+LVN RL
Sbjct: 167 GAAFISLRAGNDRAPTRTWNVGRPNATSMMALARFKLWWMMPKHTTKANEIPPETQMMLTKLPPDPETGRQLYGLFIPLIDGQAKCNLKGLPDRSLQLFAETGCPDTPVPSSDVAGLYVGVDEDPFKLVEKSFKLVNTRL 306
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: A0A835YGP5_9STRA (Galactinol--sucrose galactosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGP5_9STRA) HSP 1 Score: 157 bits (397), Expect = 7.760e-42 Identity = 79/163 (48.47%), Postives = 97/163 (59.51%), Query Frame = 1
Query: 64 GVPRATKLLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDDATGRRLFALFVPLIDGPVKCS--------------------------------------------LKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKSFRLVNNRL 420
G A ++ LH+FKLWWMKP H RR SD+PPETQLLL+E+PPD TGRRL++LF+PL+DGP KC +KGL DQHLQL+AETGC+ T VPS+D GLFVAVHDDP+ L+ KSF+LV R+
Sbjct: 176 GGSNAALVVTLHKFKLWWMKPTHGRRGSDVPPETQLLLSEMPPDPETGRRLYSLFIPLLDGPAKCXXXXXXXXXXXXXRYVGIIAQDNDIEGRCLXXXXXXXXXXXXXXXMKGLPDQHLQLLAETGCSKTPVPSSDFVGLFVAVHDDPYELLAKSFKLVQKRM 338
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: A0A835Z7Z4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z4_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.390e-30 Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 85 LLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDDATGRRLFALFVPLIDGPVKCSLKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKS 396
++AL RFKLWWM+P H S +PPETQLLL E P G L+ +F+PL+DG VKCSLKG DQ L ++AETGC GT VP+ + L++AV DPF L+E S
Sbjct: 1 MVALSRFKLWWMRPSHIAHPSAVPPETQLLLGETPEALPDGGTLYTVFIPLLDGVVKCSLKGAADQTLHVVAETGCPGTPVPAY-VHALYIAVGADPFVLLEAS 103
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: A0A7I8KFN5_SPIIN (Galactinol--sucrose galactosyltransferase n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KFN5_SPIIN) HSP 1 Score: 87.4 bits (215), Expect = 2.390e-17 Identity = 50/145 (34.48%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 4 AAFISLRAAPDKSPTR-TWRLGVPRATKLLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDD---------ATGRRLFALFVPLIDGPVKCSLKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKSFRLV 408
AAF+ ++P +S R + LG +LL L RFK+WWM P R +SDIPPETQ+LL E+ D ++ + L +P++DG + SL+G D LQ E+G G + S +F+ D+P+ L+ S +++
Sbjct: 40 AAFVGAASSPGESKARHVFTLGRLLGFRLLCLFRFKIWWMIPRVGRSSSDIPPETQMLLLEVSEDSTLEDEAVDSSSDDTFYILVLPVLDGDFRASLQGNSDNELQFCVESGDPGVQI-SRVSQAVFINFGDNPYELLTDSIKIL 183
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: U5D974_AMBTC (Galactinol--sucrose galactosyltransferase (Fragment) n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5D974_AMBTC) HSP 1 Score: 85.9 bits (211), Expect = 8.350e-17 Identity = 44/120 (36.67%), Postives = 62/120 (51.67%), Query Frame = 1
Query: 61 LGVPRATKLLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDDATGRRLFALFVPLIDGPVKCSLKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKSFRLVNNRL 420
LG R + L+ RFKLWWM D+P ETQ +L E + + ++A+F+PL++GP + SL+G L L E+G PS+ LFV DPFA + +FR V L
Sbjct: 103 LGTLREVRFLSCFRFKLWWMAQKMGTCGGDVPQETQFMLVETAQSEDSNEPIYAVFLPLLEGPFRASLQGNERDELALCIESGDPAVKTPSSLTHTLFVTAGSDPFATIADAFRAVKQHL 222
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: A0A7C4QFT5_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4QFT5_9CHLR) HSP 1 Score: 84.3 bits (207), Expect = 2.820e-16 Identity = 55/131 (41.98%), Postives = 76/131 (58.02%), Query Frame = 1
Query: 7 AFISLRAAPDKSPTRTWRLG-VPRATKLLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDDATGRRLFALFVPLIDGPVKCSLKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKS 396
AF+ L AA P LG + T+ A HR++ +WM P R ++PPETQ+LL EL A G ALFVPLID + L+G G+ L ++ E+G A AV ++ + LFVAV DDP+ALV ++
Sbjct: 26 AFVRL-AAEKPGPRHVLPLGDLAGITRFTACHRYEPFWMTPRAGTRGGEVPPETQVLLAEL----AGGG--CALFVPLIDAAFRACLQGAGEHGLAVVLESGDA--AVAADAMTALFVAVADDPYALVPRA 147
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: UPI0019BD9FA7 (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=UPI0019BD9FA7) HSP 1 Score: 82.4 bits (202), Expect = 1.350e-15 Identity = 51/114 (44.74%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 79 TKLLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDDATGRRLFALFVPLIDGPVKCSLKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKSFRLVNNRL 420
T+ +A HR++ +WM R +P ETQ LL EL GR FALFVPLID ++CSL+G G LQL+AETG A GLFVAV DDP++L+ + V+ L
Sbjct: 121 TRFVAQHRYEPFWMTVATGERLGAVPVETQFLLAELD----NGR--FALFVPLIDFLLRCSLQGDGADGLQLVAETG--DPAARQESATGLFVAVGDDPYSLISGAAMAVSKYL 226
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: UPI0019CD9B6F (Uncharacterized protein n=1 Tax=Fibrella sp. TaxID=1871320 RepID=UPI0019CD9B6F) HSP 1 Score: 76.6 bits (187), Expect = 1.380e-13 Identity = 46/118 (38.98%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 67 VPRATKLLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDDATGRRLFALFVPLIDGPVKCSLKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKSFRLVNNRL 420
VP + +A HR++ +WM IP ETQ LL EL A+FVPLIDG ++ SL+G G+ LQL+AE+G A +L G+FVAV ++P+ L+ ++ R V + L
Sbjct: 43 VPDLVRYVAHHRYEPFWMTAATGTSAGTIPVETQFLLAELTDGQV------AVFVPLIDGTLRASLQGDGENGLQLIAESG--DPAARQAELTGIFVAVGEEPYDLLARAARSVADHL 152
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Match: A0A832HHW3_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A832HHW3_9BACT) HSP 1 Score: 76.6 bits (187), Expect = 1.390e-13 Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 61 LGVPRATKLLALHRFKLWWMKPLHARRTSDIPPETQLLLTELPPDDATGRRLFALFVPLIDGPVKCSLKGLGDQHLQLMAETGCAGTAVPSNDLAGLFVAVHDDPFALVEKS 396
LG P+ T+ A +R + WWMKP + +D+P ETQ+L E+ A G+ ALFVP+IDG ++C+L G L L+ ++ AV ++ + GLF+A+ DD LV ++
Sbjct: 54 LGTPQITRWAACYRDEPWWMKPRVGKAVADVPAETQVLYGEV----ADGK--VALFVPIIDGAMRCALIGAAGNKLSLVVDSD--DPAVVADRVIGLFIAIGDDIHTLVREA 157 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7830.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7830.1.1 >prot_P-wetherbeei_contig7830.1.1 ID=prot_P-wetherbeei_contig7830.1.1|Name=mRNA_P-wetherbeei_contig7830.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp GAAFISLRAAPDKSPTRTWRLGVPRATKLLALHRFKLWWMKPLHARRTSDback to top mRNA from alignment at P-wetherbeei_contig7830:254..673- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7830.1.1 ID=mRNA_P-wetherbeei_contig7830.1.1|Name=mRNA_P-wetherbeei_contig7830.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig7830:254..673- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7830:254..673- >mRNA_P-wetherbeei_contig7830.1.1 ID=mRNA_P-wetherbeei_contig7830.1.1|Name=mRNA_P-wetherbeei_contig7830.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig7830:254..673- (Phaeothamnion wetherbeei SAG_119_79)back to top |