mRNA_P-wetherbeei_contig783.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: D7FKC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC6_ECTSI) HSP 1 Score: 116 bits (291), Expect = 2.190e-25 Identity = 67/131 (51.15%), Postives = 87/131 (66.41%), Query Frame = 2
Query: 23 GVPTAGQLKARFLGAVQPECRRAALVPESAP-GLFGQLFGSVLAAMTVPPKGMVEGDTADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSLAAHTALLNAALLDVQ*GR 412
G+PT QLK RF G V+ ECRRAALVPE A G+ G L S LA +T PKGMVEGD A+ +LARA L+E + +SAV EL+KL GL A A DW++DA+ R+ AD + + H ++LNA L+ G+
Sbjct: 481 GIPTVSQLKQRF-GIVKAECRRAALVPEQAGNGMMGHLVASALAKITFAPKGMVEGDEAEGVLARADYLLEAGELQSAVGELDKLHGLPADVAMDWLKDAKTRLTADEALRVIRCHASILNAEHLEALDGK 610
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: A0A6H5L3V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3V0_9PHAE) HSP 1 Score: 114 bits (285), Expect = 1.820e-24 Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = 2
Query: 5 AAAREGGVPTAGQLKAR---FLGAVQPECRRAALVPESAP-GLFGQLFGSVLAAMTVPPKGMVEGDTADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSLAAHTALLNA 385
AAAR G+PT QLK R G V+ ECRRAALVP+ A G+ G L S LA +T PKGMVEGD A+ +LARA L+E + +SAV ELEKL GL A A DW++DA+ R+ AD + + H A+LNA
Sbjct: 712 AAAR--GIPTVSQLKQRHAILFGIVKAECRRAALVPQQAGNGMMGHLVASALAKITFAPKGMVEGDEAEAVLARADHLLEAGELQSAVGELEKLHGLPADVAMDWLKDAKTRLTADEALRVIRCHAAILNA 840
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: W7TLX9_9STRA (Mitochondrial inner membrane protein Mitofilin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLX9_9STRA) HSP 1 Score: 111 bits (278), Expect = 6.350e-24 Identity = 61/124 (49.19%), Postives = 83/124 (66.94%), Query Frame = 2
Query: 23 GVPTAGQLKARFLGAVQPECRRAALVPESAPGLFGQLFGSVLAAMTVPPKGMVEGDTADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSLAAHTALLNAALL 394
GVPT +L+ RF VQ R AA VPES+PG+ G +F +LAA+T+ P+G+VEG AD+ LARAA VER AV ELE L GLA T +DW++DAR R+ A+++ A +ALLN +++
Sbjct: 361 GVPTPSELQVRFP-MVQKAAREAAFVPESSPGMVGHMFAGLLAAVTIQPRGLVEGSGADETLARAAYHVERGHLAEAVQELEGLGGLAGRTVEDWLQDARGRLELTQAARAMNARSALLNVSMV 483
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: K8ZAZ5_NANGC (Mitochondrion protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAZ5_NANGC) HSP 1 Score: 107 bits (268), Expect = 2.760e-22 Identity = 60/124 (48.39%), Postives = 82/124 (66.13%), Query Frame = 2
Query: 23 GVPTAGQLKARFLGAVQPECRRAALVPESAPGLFGQLFGSVLAAMTVPPKGMVEGDTADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSLAAHTALLNAALL 394
GV T +L+ RF VQ R AA VPES+PG+ G +F +LAA+T+ P+G+VEG AD+ LARAA VER AV ELE L GLA T +DW++DAR R+ A+++ A +ALLN +++
Sbjct: 564 GVLTPSELQVRFP-MVQKAAREAAFVPESSPGMVGHMFAGLLAAVTIQPRGLVEGSGADETLARAAYHVERGHLAEAVQELEGLGGLAGRTVEDWLQDARGRLELTQAARAMNARSALLNVSMV 686
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: A0A835YW45_9STRA (Mitochondrial inner membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW45_9STRA) HSP 1 Score: 106 bits (265), Expect = 6.740e-22 Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 2
Query: 23 GVPTAGQLKARFLGAVQPECRRAALVPES-APGLFGQLFGSVLAAMTVPPKGMVEGDTADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSL 358
GVPTA QL+ RF V+ E RAALVP G+ GQ G++L+ T+P GMVEG +ADD+LARA L++ D RSAV EL +L+GLAAVTA+DW++DA R+RAD ++L
Sbjct: 544 GVPTAEQLRRRFA-RVRGEAARAALVPGGDGAGVMGQAVGALLSVFTLPRHGMVEGSSADDVLARAECLLDGGDLRSAVKELSRLEGLAAVTARDWVQDAEARLRADDAMRAL 655
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: A0A5D6XY43_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY43_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.740e-16 Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 2
Query: 17 EGGVPTAGQLKARFLGAVQPECRRAALVPESAPGLFGQLFGSVLAAMTVPPKGMVEGDTADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSLAAHTALLNA 385
+ G P+ QL+ RF+ V+ RAAL P A GL GQLFGS L+ + +PP G +EGD D + +RA ++ D SA+ EL+ L G+ A A+DW+ A +R+ + AK + AH ALL A
Sbjct: 576 DAGAPSVSQLQERFV-VVKKVAHRAALAPADA-GLVGQLFGSALSLLMIPPGGPIEGDDTDAVFSRADYALKAGDIESALGELKALSGVPAQVAQDWVAAAESRLAVEQTAKVVKAHVALLAA 696
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: A0A7S2H172_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H172_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.810e-12 Identity = 54/136 (39.71%), Postives = 71/136 (52.21%), Query Frame = 2
Query: 23 GVPTAGQLKARFLGAVQPECRRAALVPESAPGLFGQLFGSVLAAMT--------VPPKGMVEG--------DTADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSLAAHTALLN 382
GVPT +L+A+F V CR AALVP+ GL GQL G + A +T +PP D AD ILA+A V+ D A+ EL+KLKG AA T KDW +DA +R+ + K + AL+N
Sbjct: 333 GVPTLSELQAKF-DKVHSVCREAALVPKGRIGLEGQLLGILFAKLTFPASPDAPIPPSTDTTAVDASPSTKDNADYILAKAQKHVQLGDLECALDELDKLKGQAAFTVKDWKKDALDRISVEKALKVIKMECALMN 467
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: A0A286GTQ0_9PROT (Uroporphyrinogen-III synthase n=1 Tax=Caenispirillum bisanense TaxID=414052 RepID=A0A286GTQ0_9PROT) HSP 1 Score: 66.2 bits (160), Expect = 2.390e-8 Identity = 54/140 (38.57%), Postives = 73/140 (52.14%), Query Frame = 2
Query: 17 EGGVPTAGQLKARFLGAVQPECRRAALVPESAPGLFGQLFGSVLAAMTVP-PKGMVEGDTADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSLAAHTALLNAALLDVQ*GRHCGEAAG 433
+ G+PT L+ RF G + E RAA P+ AP ++ +TV G GD A ++ARAA +E D +AV EL+KL+G AAV A DW+ A R+ AD K+LA T+ A Q G G+AAG
Sbjct: 583 DAGIPTRDMLQERF-GRLGTEIIRAAAAPDDAPEWVQSTVKRLMGLVTVRRTDGEAVGDGASAVVARAASALEAGDLATAVAELKKLQGDAAVVADDWLAGAEARLAAD---KALADLTSESLARFAAAQRG---GDAAG 715
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: A0A0M0K327_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K327_9EUKA) HSP 1 Score: 60.5 bits (145), Expect = 1.380e-6 Identity = 44/123 (35.77%), Postives = 62/123 (50.41%), Query Frame = 2
Query: 26 VPTAGQLKARFLGAVQPECRRAALVPESAPGLFGQLFGSVLAAMTVPPKGMVEGDT-ADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSLAAHTALLNAAL 391
VPT QL ARF+ V R AALVPE+APGL+G S+ + +T+ + G T A +L A + R D R AV + L G + A W+E A R+ + + A + + AAL
Sbjct: 307 VPTVPQLTARFVD-VAAAGRTAALVPETAPGLWGHALASITSFITL--RAAETGHTHASTVLTTAETALARGDLRRAVEAVRALHGPSRAAASGWLEAAEERLLLEQILTVATAESTIATAAL 426
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Match: A0A545TRI0_9PROT (Uncharacterized protein n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TRI0_9PROT) HSP 1 Score: 58.2 bits (139), Expect = 9.980e-6 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 2
Query: 50 ARFLGAVQPECRRAALVPESAPGL---FGQLFGSVLAA--------------------MTVPPKGMVEGDTADDILARAADLVERDDFRSAVTELEKLKGLAAVTAKDWMEDARNRMRADMVAKSLAAHTALL 379
A A+ P RAA + PGL F Q+ GSV+AA +T+ P G+VEGD A +LARA +E D AV EL+ L G AA A W ++A R+ A LA A +
Sbjct: 536 AELKAALAPLSERAASGVAALPGLRVSFDQMAGSVVAAARGGEEDDWIAKTVRKVSEAVTIRPVGLVEGDDAGAVLARAEVKLEAGDLAGAVAELDALSGSAAEGAAAWRQEAEARLEAQKALSLLATRAATM 668 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig783.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig783.4.1 >prot_P-wetherbeei_contig783.4.1 ID=prot_P-wetherbeei_contig783.4.1|Name=mRNA_P-wetherbeei_contig783.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp GGSGARGWRADGRPTQGAVPGRGAARVPAGGAGARVRAGAVWAAVWERAGback to top mRNA from alignment at P-wetherbeei_contig783:5912..7154+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig783.4.1 ID=mRNA_P-wetherbeei_contig783.4.1|Name=mRNA_P-wetherbeei_contig783.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1243bp|location=Sequence derived from alignment at P-wetherbeei_contig783:5912..7154+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig783:5912..7154+ >mRNA_P-wetherbeei_contig783.4.1 ID=mRNA_P-wetherbeei_contig783.4.1|Name=mRNA_P-wetherbeei_contig783.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig783:5912..7154+ (Phaeothamnion wetherbeei SAG_119_79)back to top |