mRNA_P-wetherbeei_contig7812.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: A0A1F4AST7_9PROT (Uncharacterized protein n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1F4AST7_9PROT) HSP 1 Score: 131 bits (329), Expect = 2.040e-36 Identity = 66/118 (55.93%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 1 HTATLRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQLHR 354
+ TLRLIA ER+P+ PP L PLF++LA + EA TE+RIW LWM+HPNAAA ++LDRA DIA R YDIAETRL LLR P + EAW+K TLYYL+ RD++ + +HR
Sbjct: 2 YAETLRLIATFSERAPSPVLPPRLGPLFKRLAATTLQIEADQTEDRIWELWMAHPNAAAARMLDRAATDIATRLYDIAETRLGTLLRARPDFPEAWNKRATLYYLIERDDDFVRDVHR 119
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: A0A0S8B656_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B656_9PROT) HSP 1 Score: 129 bits (324), Expect = 8.050e-36 Identity = 64/114 (56.14%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 13 LRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQLHR 354
+ LIA +R PA + P L LFQ+L+ E +ALA EERIW +WM HP+ A++ LDR+ DIAARR+D+AETRL RLLR PGY EAWHK TLYYLLG D C+ L R
Sbjct: 1 MSLIAARHQRRPACTTP-ALDALFQRLSACTSEADALAVEERIWHIWMHHPHRIASEALDRSADDIAARRFDVAETRLTRLLRCLPGYVEAWHKRATLYYLLGDDLHCVQDLSR 113
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: A0A536T2S3_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536T2S3_9PROT) HSP 1 Score: 126 bits (317), Expect = 1.100e-34 Identity = 70/114 (61.40%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 13 LRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQLHR 354
L LIA ER PA L LFQ+LA A EAL TE+RIW +WM HP+ AA LD AT DIAA+RYDIAETRL LLR P YAEAWHK TLYYLLGRD ECL + R
Sbjct: 9 LALIAARRERRPARDLA-ALAQLFQRLA-ACASIEALETEDRIWGVWMHHPHRAAAAALDAATRDIAAKRYDIAETRLTALLRAAPAYAEAWHKRATLYYLLGRDGECLHDIRR 120
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: A0A536WLX1_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WLX1_9PROT) HSP 1 Score: 125 bits (315), Expect = 2.210e-34 Identity = 70/114 (61.40%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 13 LRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQLHR 354
L LIA ER PA P L LF++LA A REA TEERIW +WM HP+ AA LD AT DIAA+RYDIAETRL LLR P YAEAWHK LYYLLGRD ECL + R
Sbjct: 9 LDLIATRRERRPARDLP-ALAALFRRLA-ACAAREASDTEERIWGVWMHHPHRAAAAALDAATHDIAAKRYDIAETRLTALLRAAPLYAEAWHKRAALYYLLGRDAECLHDIRR 120
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: UPI00135830B4 (hypothetical protein n=1 Tax=Cognatazoarcus halotolerans TaxID=2686016 RepID=UPI00135830B4) HSP 1 Score: 125 bits (315), Expect = 2.540e-34 Identity = 67/114 (58.77%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 13 LRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQLHR 354
LRL+ LP R PAA+ PPVL LF KL H A E+ IW WMSH NAAA +VLD+A DIA DIAETRLVRLLR CP YAEAW+KL + YL GRD+EC A + R
Sbjct: 9 LRLLPTLPYRRPAAAMPPVLDILFAKLR--HPASNADEVEDLIWDTWMSHRNAAAERVLDKAVDDIARNSLDIAETRLVRLLRQCPDYAEAWNKLSVVLYLAGRDDECTAAICR 120
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: A0A521YPJ2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YPJ2_9PROT) HSP 1 Score: 124 bits (311), Expect = 9.410e-34 Identity = 68/114 (59.65%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 13 LRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQLHR 354
L LIA R PA L LF++LAR EA ATE+ IW +WM HP++AA + LDRATGDIAA+RYDIAETRL LLR P +AEAWHK LYYLLGRDEECL + R
Sbjct: 11 LGLIAARRARRPARPLA-FLDELFRRLARCSGA-EAGATEDLIWNVWMDHPHSAAARALDRATGDIAAQRYDIAETRLTLLLRQAPDFAEAWHKRAALYYLLGRDEECLRDIAR 122
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: A0A537EEM7_9PROT (Uncharacterized protein n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537EEM7_9PROT) HSP 1 Score: 121 bits (303), Expect = 1.480e-32 Identity = 66/114 (57.89%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 13 LRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQLHR 354
L LIA R PA + L LF +LA EAL TE+RIW WM HP+ AA + LD AT DIAARRYDIAETRL LLR P +AEAWHK LYYLLGRD+ECL + R
Sbjct: 9 LGLIADRRARRPARTLL-ALDALFNRLAACGGPDEALRTEDRIWDAWMHHPHRAAAEALDLATRDIAARRYDIAETRLSALLRSAPDFAEAWHKRAALYYLLGRDDECLCDIRR 121
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: A0A537A9A5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A9A5_9PROT) HSP 1 Score: 119 bits (299), Expect = 5.820e-32 Identity = 66/114 (57.89%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 13 LRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQLHR 354
L LIA R PA L LF++L A EAL TE+RIW +WM HP+ A LD AT DIAARRYDIAETRL LLR P YAEAWHK LYYLLGRD+ECL + R
Sbjct: 9 LSLIAARRSRRPARDLA-ALAQLFRRLG-ACASAEALETEDRIWGMWMHHPHRGAAGALDAATRDIAARRYDIAETRLTALLRSAPLYAEAWHKRAALYYLLGRDDECLRDIRR 120
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: A0A1F4F7R2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4F7R2_9PROT) HSP 1 Score: 113 bits (282), Expect = 2.100e-29 Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 13 LRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQLHR 354
L LIA R PA + P L LF++LA EA TE+ IW +WM HP+ AA + LD AT DIAA+RYDIAETRL LLR P +AEAWHK TLYY+L RD ECL + R
Sbjct: 8 LGLIAARRARRPARALP-FLDELFRRLACCGGA-EASETEDLIWDVWMDHPHRAAARALDLATRDIAAQRYDIAETRLTLLLRRAPEFAEAWHKRATLYYMLARDTECLHDIRR 119
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Match: A0A2E4XPM6_9PROT (Uncharacterized protein n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2E4XPM6_9PROT) HSP 1 Score: 89.0 bits (219), Expect = 9.550e-20 Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 13 LRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALWMSHPNAAATKVLDRATGDIAARRYDIAETRLVRLLRVCPGYAEAWHKLGTLYYLLGRDEECLAQL 348
L LI L +PA + P L+ LF+ LA+ + E IWALW SHP+ +A + ++R G +A R+D AE L L+R P +AEAW+K TLY+LL RD+E +A +
Sbjct: 15 LELILSLDAMAPAPNLPDQLNGLFEDLAKPELDEPLDVVEGSIWALWCSHPDDSAVQRMERVIGGLAQGRFDAAERLLDGLVRDYPDWAEAWNKRATLYFLLDRDDESVADI 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7812.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7812.3.1 >prot_P-wetherbeei_contig7812.3.1 ID=prot_P-wetherbeei_contig7812.3.1|Name=mRNA_P-wetherbeei_contig7812.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp HTATLRLIALLPERSPAASAPPVLHPLFQKLARAHDEREALATEERIWALback to top mRNA from alignment at P-wetherbeei_contig7812:2618..2971+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7812.3.1 ID=mRNA_P-wetherbeei_contig7812.3.1|Name=mRNA_P-wetherbeei_contig7812.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig7812:2618..2971+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7812:2618..2971+ >mRNA_P-wetherbeei_contig7812.3.1 ID=mRNA_P-wetherbeei_contig7812.3.1|Name=mRNA_P-wetherbeei_contig7812.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig7812:2618..2971+ (Phaeothamnion wetherbeei SAG_119_79)back to top |