mRNA_P-wetherbeei_contig7808.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7808.2.1
Unique NamemRNA_P-wetherbeei_contig7808.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: UPI001FEC9239 (TRAP transporter large permease subunit n=1 Tax=Propylenella binzhouense TaxID=2555902 RepID=UPI001FEC9239)

HSP 1 Score: 416 bits (1068), Expect = 5.350e-136
Identity = 244/498 (49.00%), Postives = 326/498 (65.46%), Query Frame = 1
Query:    1 MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGATLGFVQFVWNP----------ERXXXPDAPPPGDDVGGWKLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            ML+IC D+ LR   S PI+GV + VS  +VACVFLQ+ + I + RL+RA+       A  P  A +L+  +  V   L W+ + W     L ++ TGE+ GA GA+QI +WPFK+A++ G  +  V+ VW            ER    DA P                  V A ++G  +++YL F     P+ VG+  LA +LV V +GMPI   L+ LS++G+W+ R   + A N LG+AA  A+ SYEFG +PLF+MMG++L+KADVG+DA++VA +LL R+RGGLG+ATV ANA+FASI GSS+ASAAVFS+IAVP M+E GYT +F+VG VAGSSVLGMLIPPSLLLIIYGLVAE S+GKLF+AA+IPGL+LA AF     L+A F P +VG      +   M   +V+++LAPVV ++  V+GGIY G+FTPTEA AVG   A L+ A R ++T    + I+LET  +SA ILFLIVAANLY R + L+ IP
Sbjct:   42 MLMICADIVLRFFFSAPINGVTDIVSYVIVACVFLQIGSTIRDNRLIRADFLFGTWAAERPGFARVLDLAFFGVASLLLWRALGWLWRDFLGSYATGEFTGAVGAYQITIWPFKLAVVVGCAVALVETVWKAAAAAFDLARRERLRSADAFP------------------VFAFLTGVAVFLYLNFEVASSPVSVGLLSLAGLLVAVAIGMPIAFALLVLSFVGVWLTRHNPVVADNALGIAASGAIRSYEFGVVPLFVMMGLLLDKADVGRDAFQVAVSLLRRIRGGLGIATVAANAVFASITGSSIASAAVFSRIAVPPMIEGGYTARFAVGVVAGSSVLGMLIPPSLLLIIYGLVAEASIGKLFVAAIIPGLLLAGAFALLNVLMASFFPRFVGRPH-EIEGDGMTPGQVVLRLAPVVGIVALVMGGIYAGMFTPTEAGAVGALGAFLVGALRRKLTLPTIRRIVLETGYISAAILFLIVAANLYGRMLTLSTIP 520          
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: A0A5J5GL73_9RHOB (TRAP transporter large permease subunit n=2 Tax=Histidinibacterium aquaticum TaxID=2613962 RepID=A0A5J5GL73_9RHOB)

HSP 1 Score: 393 bits (1010), Expect = 9.120e-128
Identity = 235/489 (48.06%), Postives = 316/489 (64.62%), Query Frame = 1
Query:    1 MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGATLGFVQFVWNPERXXXPDAPPPGDDVGGWKLGGVTGWLVVLAAISGS-LLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            M+L+C DV  R   + PI+GVAE VS SV A VFL LP  I   R LRA+  ++RLE R+PR  ALLN  +  VGV +  KI     P+LLD  E  E+ GA GAF  PVWPF   +L GA L  +QF     +           D  G     V   +VV   + G+ L+Y   L T DL  ++VG++ +  ML LV  GM +   L+ LS++GIW+ RG    A  +L +A   ++ SY F  IPLF++MG+ +E ADVG+DA+ V A LL R+RGGLG+ATVFAN IFA+I GS++ASA VF+++A P M+ +GYT +F+VG VAGSSVLGMLIPPS+LL+I+GL+AE S+G LF AA++PGL+LA AF   +  L+ F PD+VG +     M+ + L EV  +L P+V+L+  V+GGIYGG FTPTE+ AVG   A +IA  R  ++ +  + ILLETA +S  ILFL+VAANLY+R + L+ IP
Sbjct:    1 MVLVCTDVVSRAFANSPIAGVAEVVSFSVPATVFLALPYCIRTGRFLRADFLLQRLEPRSPRGGALLNLVFNAVGVVVFAKITQTVWPRLLDQIEEAEFFGAIGAFTAPVWPFTTGILVGAVLAALQFALMTLQEARDFRSALATDRDGST---VFALVVVFLVVCGAGLVY---LVTGDLSRVDVGIFSIIGMLALVLSGMHLASALIVLSFLGIWMIRGTAAVAEGSLAIATTGSINSYAFAVIPLFVLMGLFIEVADVGRDAFSVLARLLRRIRGGLGIATVFANGIFAAITGSTIASATVFTRVAAPPMISNGYTSRFAVGVVAGSSVLGMLIPPSILLLIFGLIAEVSIGALFTAAILPGLLLASAFALLVLGLSWFAPDFVGNSMPVEDMESVTLGEVARRLLPIVLLVALVLGGIYGGFFTPTESGAVGAAGAFIIALVRRSLSLQRLRTILLETAEISGSILFLVVAANLYSRMLTLSAIP 483          
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: UPI00036C7864 (TRAP transporter large permease subunit n=1 Tax=Amorphus coralli TaxID=340680 RepID=UPI00036C7864)

HSP 1 Score: 393 bits (1009), Expect = 6.910e-127
Identity = 238/490 (48.57%), Postives = 320/490 (65.31%), Query Frame = 1
Query:    1 MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGATLGFVQFVWNPERXXXPDAPP--PGDDVGGWKLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            M+L+C DV  R AL++PI GVAE VS SV +CVFL +   I   R LRA+  IE +E R PRA AL N  + + G ++ +K+     P+++ ++   ++ G+ G F  P WPF  AL  GA L  +QF                 G+   G  L  V G+LV+  A+ G+L  +    T DL PI++G   LA ML +V  G+ I   L+ LS++GIW+ R   + A  +L LAA  ++ SY FG IPLFI+MG+ ++ A+VG+DA+ VAA LL R+RGGLG+ATVFANAIFA+I GSS+ASAAVF+++A P MV  GYT++FSVG VAGSSVLGMLIPPSLLLI+YGL+AE SVGKLF AA++PGL+LA  FC  I L+A   P  VG A     ++ +   +  VKL P++ LI+ V+GGIY G FTPTE+ AVG     LIA AR  ++ +  +++LLE A +SA ILFLI+AANLY+R + LT IP
Sbjct:   60 MILVCADVLARGALNRPILGVAEIVSYSVPSCVFLAVALSIRTGRFLRADFVIENIEKRYPRAGALFNTLFNLAGTWVFFKVAEGLWPRMVRSFVNDDFFGSVGTFTAPTWPFIAALFLGACLAALQFAVFTLTAGADSLRHRNSGEPARGMIL--VGGFLVI--AVGGALFAI----TGDLSPIDLGFVALAGMLFMVLAGLHIATALILLSFLGIWLVRHNPLIAERSLALAAAGSIKSYSFGVIPLFILMGLFVDIANVGRDAFAVAAGLLRRIRGGLGVATVFANAIFAAITGSSIASAAVFTRVATPQMVAHGYTRRFSVGVVAGSSVLGMLIPPSLLLIVYGLIAEVSVGKLFTAAILPGLLLAATFCATILLMAWLTPGQVGDARPADDVEGISFRDFAVKLFPILTLIVVVVGGIYAGYFTPTESGAVGAAGGFLIALARRELSWQKLRQVLLEAAEISAAILFLIIAANLYSRMLTLTTIP 541          
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: UPI001FE24640 (TRAP transporter large permease subunit n=1 Tax=Chelativorans alearense TaxID=2681495 RepID=UPI001FE24640)

HSP 1 Score: 392 bits (1006), Expect = 1.200e-126
Identity = 235/493 (47.67%), Postives = 323/493 (65.52%), Query Frame = 1
Query:    1 MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGATLGFVQ-----FVWNPERXXXPDAPPPGDDVGGWKLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            MLLI  D+ +R  L +PI+GV++ V+L++VACVFLQL + I   RL+RA+  I   + + P  A  +   +      +    ++W    L+ ++ +GE++GA GA+QI VWPFK A++ G  + FV+      +           P PG+      L  +  ++  +AA      ++ L FT  L P+ +G+  LA +LV V LGMPI   L+ LS++G+W+ R     A N LG+AA  A+ SYEFG +PLF++MG+VL++AD G+DA++VA  LL R+RGGLGMATV ANAIFASI GSS+ASAAVFS+IAVP M+ESGYT +F+VG V GSSVLGMLIPPSLLLIIYGL+AE SVGKLFIAA++PGL+LA AF      LA + P +VG     A  + MP AE+  +LAPVV ++  V+GGIY G+FT TEA AVG   A ++  AR ++  K    ++LET  ++A ILFLI+AANLY R + L+ IP
Sbjct:   39 MLLIVADIGMRFFLLRPINGVSDIVALTIVACVFLQLGSTIGGGRLVRADFLIGAWQEKRPHLARTMELVFFAAAAAILAAALSWLWRYLVKSYHSGEFSGAVGAYQITVWPFKFAVVAGCAVAFVEAGRRALLSGSGLLGALRRPAPGEPALSRDLLPIAIFVGAVAA------FLILNFTLTLSPVWIGIVSLAGLLVAVTLGMPIAFALLALSFLGLWLVRHNPAIAQNALGIAAGGAIRSYEFGVVPLFVLMGLVLDRADAGRDAFQVAVHLLRRVRGGLGMATVAANAIFASITGSSIASAAVFSRIAVPPMIESGYTPRFAVGVVTGSSVLGMLIPPSLLLIIYGLLAEVSVGKLFIAAIVPGLLLASAFAALNVALATWFPRFVGTPKPVAA-EGMPAAEMARRLAPVVAIVAVVMGGIYAGVFTATEAGAVGALGAFIVGFARRKLGLKEIGRVVLETGYIAAGILFLIIAANLYGRMLTLSTIP 524          
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: A0A346R7U0_9HYPH (TRAP transporter large permease subunit n=1 Tax=Breoghania sp. L-A4 TaxID=2304600 RepID=A0A346R7U0_9HYPH)

HSP 1 Score: 390 bits (1001), Expect = 2.040e-126
Identity = 225/486 (46.30%), Postives = 318/486 (65.43%), Query Frame = 1
Query:    7 LICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGATLGFVQFVWNPERXXXPDAPPPGDDVGGWKLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            +IC D+ +R   + PI GV + VS+ +VACVFLQL + I   RL+RA+  +       P  A +++  + + G  L    +AW    +  ++ + ++ GA GA+ I VWPFK+ ++ G  +  +  +          AP      GG +L  +   +V    ++G   ++ L FT++L P+ +GV  L  +L  +  GMPI   L+GLS++G+W+ R   + A NTLG++  S + SYEFG IPLF+MMG++L+KADVG+DA++VA  LL  +RGGLG+ATV ANA+FASI GSS+ASAAVFS+IAVPSM+E GYTK+F+VG VAGSSVLGMLIPPSLLLIIYGL+AE S+GKLFIAA++PGL+LA AF      LA F P +VG           PL E++ +L PV+ +I+ V+GGIY G+FTPTEA AVG   A ++   RG++T    + ++LET  +SAVILFLI+AA+ Y R + L+ IP
Sbjct:    1 MICADIVMRFFFNLPIHGVTDVVSMLIVACVFLQLGSTIGSGRLIRADFLLGHWSNTRPVFARIVDAAFHLTGAALLALGLAWLWRDMGKSYASDDFTGAVGAYTITVWPFKLGVVIGCAVALIVTLHRALALLAGIAPILALRTGGARLRALLPAVVFFGIVAG---FLILNFTANLSPVMIGVLSLVGLLAAIATGMPIAFALLGLSFVGVWLTRNNMLVAENTLGISMTSTIRSYEFGVIPLFVMMGLILDKADVGRDAFQVAVTLLRGVRGGLGIATVGANALFASITGSSIASAAVFSRIAVPSMIEGGYTKRFAVGVVAGSSVLGMLIPPSLLLIIYGLIAEASIGKLFIAAILPGLLLAAAFAVLNIGLATFFPSFVGRPHKLTGPGLKPL-ELLTRLLPVLSIIVLVMGGIYAGVFTPTEAGAVGALGAFIVGGVRGKLTLATIRNVVLETGYISAVILFLIIAASFYARMLTLSTIP 482          
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: UPI00040CA9F4 (TRAP transporter large permease subunit n=1 Tax=Amorphus coralli TaxID=340680 RepID=UPI00040CA9F4)

HSP 1 Score: 391 bits (1004), Expect = 2.320e-126
Identity = 231/493 (46.86%), Postives = 322/493 (65.31%), Query Frame = 1
Query:    1 MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGATLGFVQFV-----WNPERXXXPDAPPPGDDVGGWKLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            MLLIC DV LR   S P++GV+EFV+ ++VACVF QL A +   +++ A+  +   E   P  A      YA + + L   ++ W      DAW T E+AGA GAFQ+P+WPFK+A   GA +   + +        +       P PG         G+ G LV+L  +  +  ++ L+   DL  +++G      +  +V  GMP+   L+G+S++ IW  R     +LN LG++A  AV S+EFG +PLF+MMG+VL++ADVG+DA++VA  LL  +RGGL  ATV ANAIFA+I GSS+ASAAVFS+IAVP MVE+GYT++F+VG VAGSSVLGMLIPPSLLLIIYGLVAE S+G LF+AA++PG++LA+AF      +A F   +VG A   A  + M   E++  LAPV+ LI+ V+GGIYGG+ +PTEA A+G   AL++AAARGR+T    K+++LE   V+A ILFLI+AA+ Y+R +AL+ IP
Sbjct:   42 MLLICADVLLRKFFSLPLNGVSEFVAYAIVACVFCQLGATMRAGKMIHADFLMGGWERDKPVLAHGAMALYAAIALALLALMVQWLADDAADAWRTDEFAGAVGAFQMPLWPFKLATAIGALVATAEALILLCRHGAKFLRALAVPGPGR--------GLVG-LVILVVLMAA--FLLLIAYGDLSRMQLGFLAFLGLFAMVACGMPVAFALIGMSFVAIWAIRSNVDVSLNALGISASGAVRSFEFGVVPLFVMMGLVLDRADVGRDAFRVAVVLLRGVRGGLANATVGANAIFAAITGSSIASAAVFSRIAVPPMVEAGYTRRFAVGVVAGSSVLGMLIPPSLLLIIYGLVAETSIGALFVAAIVPGILLAVAFGLMNATMATFAKGFVGNAKPDATDERMSFGEMLANLAPVIFLIVLVMGGIYGGLVSPTEAGALGALGALVVAAARGRLTWPTLKDVVLEAGFVTAGILFLIIAASFYSRMIALSSIP 523          
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: A0A3N2R6T9_9RHOB (TRAP transporter large permease subunit n=2 Tax=Histidinibacterium lentulum TaxID=2480588 RepID=A0A3N2R6T9_9RHOB)

HSP 1 Score: 384 bits (986), Expect = 1.060e-123
Identity = 230/491 (46.84%), Postives = 320/491 (65.17%), Query Frame = 1
Query:    1 MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGA---TLGFVQFVWNPERXXXPDAPPPGDDVGGWKLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            M+LI  DV +R     PI+GV++FV+ ++VACVF QL + I   RL+RA+  +   E   P+ A   +  +  V   L            + +    E+AGA GAF+IP+WPFK+A++ GA   TL  ++      R         G D        +TG  VV     G+LL++ LLF  DL P++VG+     + VLV  GMP+  VL+ +S++G+W+ R     A+N+LGLAA  A+ S EFG +PLF+MMG+VL++ADVG+DA++VA   L +LRGGLG+ATV ANAIFA+I GSS+ASAAVFS++AVP+M E+GYT++FS G +AGSSVLGMLIPPSLLLI+YGL+AE SVG LFIAA++PG++LA+AF      LA + P +VG     A+ + M   E+  +L PV+ +I  V+GGIYGG+F+PTEA A+G   A ++A AR ++     K I LET  ++A ILFLI+AANLY R +AL+ IP
Sbjct:   37 MMLITADVVMRGVFQIPINGVSDFVAYAIVACVFGQLGSTIRSGRLIRADFLMGSWERNRPQLALGTSVLFFAVAAGLMMLATEKLWVDFMKSVREAEFAGAVGAFRIPLWPFKLAVVLGAAVATLETLRLTLVGARDFAASIRAHGPD-----RVSMTGLAVVGG---GALLFLGLLFGGDLSPVQVGLMAFLGLFVLVACGMPVAFVLLAMSFVGVWLTRDNLTVAMNSLGLAASGAIRSVEFGVVPLFVMMGLVLDRADVGRDAFQVAVVALRKLRGGLGVATVAANAIFAAITGSSIASAAVFSRVAVPAMDEAGYTRRFSTGVIAGSSVLGMLIPPSLLLIVYGLIAEVSVGALFIAAIVPGIILAVAFSLLNIGLATWFPSFVGNPKPTAETEQMSGGEMAWRLVPVIFIIALVMGGIYGGLFSPTEAGAIGALGAFVVAGARRKLDWTAIKSIALETGYITASILFLIIAANLYARMLALSTIP 519          
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: UPI00167FF38D (TRAP transporter large permease subunit n=1 Tax=Roseibium aggregatum TaxID=187304 RepID=UPI00167FF38D)

HSP 1 Score: 382 bits (982), Expect = 4.700e-123
Identity = 231/489 (47.24%), Postives = 311/489 (63.60%), Query Frame = 1
Query:    1 MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGATLGFVQ-FVWNPERXXXPDAPPPGDDVGGWKLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            MLLI +DV  R  LS P++GVAEFV+ S+VAC+F QL A I   +++  +  +   E R P  A      Y  +   L  +I+ W       AW  GEY+GA GAFQ+P+WPFK+    GA +   + F               GD     +  G+ G LV +A     +L++  +   DL  I++G    A +  LV  GMP+   L+ +S+I IW  R     A N +GLAA   V S+EFG +PLF+MMG+VL++ADVG+DA++VA  LL  +RGGL  ATV ANA+FA+I GSS+ASAAVFS+IAVP MVE GY+K+F+VG VAGSS+LGMLIPPS+LLIIYGL+AE SVG LF+AA++PG++LA  FC     L  F P +VG        + M   E+   LAPVV LIL V+GGIYGG+F+PTEA A+G   A +IAAAR R+T +  K ++LET  ++A ILFLI++A+LY+R +AL+ IP
Sbjct:   42 MLLIFVDVMARKFLSLPLNGVAEFVAYSIVACIFCQLGAAIRNGKMIATDFIMGAWEERRPVLAEGTKAIYYCIAFLLLARIVTWLGDDAWSAWADGEYSGAVGAFQMPLWPFKLVTALGAVVAAAEAFRVLAVNTAGLIRSLSGDRA---QRQGLIGLLVFIAVC---ILFLLAMAYGDLTRIQLGFLAFAGLFALVACGMPVAFSLIAMSFIAIWAIRSNISIADNAMGLAASGTVRSFEFGVVPLFVMMGLVLDRADVGRDAFRVAVFLLSGIRGGLANATVAANAVFAAITGSSIASAAVFSRIAVPPMVEGGYSKRFAVGVVAGSSILGMLIPPSILLIIYGLIAEASVGALFVAAIVPGVLLAACFCLLNIALVSFFPKFVGDPMPGLDGERMSFGEICRNLAPVVFLILLVMGGIYGGVFSPTEAGAIGALGAYVIAAARRRLTWETVKRVVLETGFITAGILFLIISASLYSRMLALSSIP 524          
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: A0A1Y5RMN7_9RHOB (Sialic acid TRAP transporter permease protein SiaT n=1 Tax=Roseisalinus antarcticus TaxID=254357 RepID=A0A1Y5RMN7_9RHOB)

HSP 1 Score: 381 bits (979), Expect = 1.280e-122
Identity = 226/493 (45.84%), Postives = 324/493 (65.72%), Query Frame = 1
Query:    1 MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAA--ALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGATLGFVQFVWNPERXXXPDAP---PPGDDVGGWKLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            M +I  DV +R   S PI+GV++FV+ S+VACVF+QL + I   RL++AE  +   E   P  A  A + F +A     LC+ +  W      +A+++G+++GA+GA+Q+ +WPFK+A++ GA L  ++ +          A      GD  G W      G  ++L  I+G   ++ L+F   L  +++GV     + VLV  GMP+ + L+ +S+IGIW+ RG    A N LG+AA  A+ SYEFG +PLF+ MG+VL++ADVG+DA++VA   L RLRGGLG+ATV ANAIFA+I GSS      FS++AVP+M E+GYT++F+ G +AGSSVLGMLIPPSLLLIIY L+AE SVG LFIAA+IPGL+LA+AF     +LA++ P +VG   A  + + M + E++ +L PV+ ++  V+GGIYGG F+PTEAAA+G   A ++A AR ++   + K I LET  ++A ILFLIVAANLY R + L+ IP
Sbjct:   42 MFVIAADVLMRNLFSIPINGVSDFVAFSIVACVFVQLGSTIRSDRLIKAEFLMAGWETSRPALAHGAKVVF-FATAAGLLCFAVQ-WLFEDFHEAYQSGQFSGARGAYQLVLWPFKLAVVAGAVLAVIECMRVAIVQGAAFARLVLAEGDRRGLW------GLALLLVLIAG---FVLLMFGGGLSSVQIGVMAFVGLFVLVACGMPVAIALIAMSFIGIWLTRGNINVAQNGLGIAAAGAIRSYEFGVVPLFVTMGLVLDRADVGRDAFQVAVVALRRLRGGLGVATVAANAIFAAITGSSXXXXXXFSRVAVPAMDEAGYTRRFAAGVIAGSSVLGMLIPPSLLLIIYALIAEVSVGSLFIAAIIPGLLLAVAFAVLNVVLAIWAPGFVGTPKALPETERMSVREMLGRLLPVIFIVTLVMGGIYGGFFSPTEAAAIGALGAFIVAGARRKLNWTVIKSIALETGYITASILFLIVAANLYARMLTLSTIP 523          
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Match: UPI001C98BF3B (TRAP transporter large permease subunit n=1 Tax=Leisingera daeponensis TaxID=405746 RepID=UPI001C98BF3B)

HSP 1 Score: 377 bits (969), Expect = 4.380e-121
Identity = 227/499 (45.49%), Postives = 317/499 (63.53%), Query Frame = 1
Query:    1 MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAEMFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYAGAQGAFQIPVWPFKVALLTGATLGFVQFVWNPERXXXPDAPP-----------PGDDVGGWKLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLGMPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIMMGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVASAAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAEESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPLAEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRITGKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP 1464
            MLLIC D+  RT L+ P+ GV+E V+ S+VA VFLQ    +   R+ R ++ I  LEA  P AA+L+   + + G+F+   I   T PKL DAW   E+ GAQG F  PVWP K  L  G+ L  + F           A             P     GW      G+    A +   L+  YLLF++DL  +++G+  +A ML+L+F G  I + L+ LS++GIW+ R     A+ +L LAA  A+  Y FG +PLF++MG+V++ AD+G+DA++VAA LL +++GGLGMATV ANA+FASI G S+ASAAVFS++AVP MV +GY  +F++G VAGSSVLGMLIPPSLLLIIYG++AE SVG LF+AA++PG +LA  F  GIYL+A+ +P  V  ++    ++       + KL P+ IL+L V+GGIY GIFTPTEA A G   A+ +A AR ++T + F  +L+ET  VS  IL LI+AA++Y+R + L+ IP
Sbjct:   37 MLLICGDIFGRTVLNTPLQGVSEIVANSIVAIVFLQAAHALMSGRMTRTDILIGWLEAERPFAASLIRIVFHLAGIFVFAVIATGTWPKLADAWIENEFFGAQGVFTAPVWPIKACLFAGSLLTCLAFAIQVLHDIKTLAGSGRVAPLKILHTPTVQPRGW------GYFAAFAVL---LVLGYLLFSADLGRVQIGLVAIAFMLLLIFSGAHIAVALIVLSFLGIWLIRDNPNVAMRSLALAADGAINRYLFGVVPLFVLMGLVVDAADIGKDAFRVAAWLLQKIKGGLGMATVAANAVFASITGISIASAAVFSRVAVPQMVANGYNNRFALGVVAGSSVLGMLIPPSLLLIIYGVLAEVSVGALFLAAIVPGALLAAVFGIGIYLMALLRPRLVMQSERPTVIEGETWGSAVTKLTPIAILVLIVLGGIYSGIFTPTEAGAAGAAAAIGVALARRKLTLRRFWNVLVETGLVSVSILMLIIAASMYSRMLTLSTIP 526          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7808.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001FEC92395.350e-13649.00TRAP transporter large permease subunit n=1 Tax=Pr... [more]
A0A5J5GL73_9RHOB9.120e-12848.06TRAP transporter large permease subunit n=2 Tax=Hi... [more]
UPI00036C78646.910e-12748.57TRAP transporter large permease subunit n=1 Tax=Am... [more]
UPI001FE246401.200e-12647.67TRAP transporter large permease subunit n=1 Tax=Ch... [more]
A0A346R7U0_9HYPH2.040e-12646.30TRAP transporter large permease subunit n=1 Tax=Br... [more]
UPI00040CA9F42.320e-12646.86TRAP transporter large permease subunit n=1 Tax=Am... [more]
A0A3N2R6T9_9RHOB1.060e-12346.84TRAP transporter large permease subunit n=2 Tax=Hi... [more]
UPI00167FF38D4.700e-12347.24TRAP transporter large permease subunit n=1 Tax=Ro... [more]
A0A1Y5RMN7_9RHOB1.280e-12245.84Sialic acid TRAP transporter permease protein SiaT... [more]
UPI001C98BF3B4.380e-12145.49TRAP transporter large permease subunit n=1 Tax=Le... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7808contigP-wetherbeei_contig7808:33..1516 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1120983.KB894574_gene927
PFAMsDctM,DctQ
Model size1464
Max annot lvl28211|Alphaproteobacteria
Exons2
Evalue1.6e-127
EggNOG OGsCOG1593@1|root,COG1593@2|Bacteria,1MU0F@1224|Proteobacteria,2TRM1@28211|Alphaproteobacteria,1JQMN@119043|Rhodobiaceae
DescriptionTripartite ATP-independent periplasmic transporter, DctM component
Cds size1464
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187001.8254411-CDS-P-wetherbeei_contig7808:32..11071683187001.8254411-CDS-P-wetherbeei_contig7808:32..1107Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7808 33..1107 -
1683187001.837687-CDS-P-wetherbeei_contig7808:1127..15161683187001.837687-CDS-P-wetherbeei_contig7808:1127..1516Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7808 1128..1516 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7808.2.1prot_P-wetherbeei_contig7808.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7808 33..1516 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7808.2.1

>prot_P-wetherbeei_contig7808.2.1 ID=prot_P-wetherbeei_contig7808.2.1|Name=mRNA_P-wetherbeei_contig7808.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=488bp
MLLICIDVALRTALSKPISGVAEFVSLSVVACVFLQLPALIAERRLLRAE
MFIERLEARNPRAAALLNFTYAVVGVFLCWKIMAWTLPKLLDAWETGEYA
GAQGAFQIPVWPFKVALLTGATLGFVQFVWNPEXXXXPDAPPPGDDVGGW
KLGGVTGWLVVLAAISGSLLYMYLLFTSDLKPIEVGVWCLAAMLVLVFLG
MPIPLVLMGLSYIGIWVARGGEMNALNTLGLAAWSAVGSYEFGTIPLFIM
MGIVLEKADVGQDAYKVAAALLGRLRGGLGMATVFANAIFASIVGSSVAS
AAVFSKIAVPSMVESGYTKKFSVGCVAGSSVLGMLIPPSLLLIIYGLVAE
ESVGKLFIAAVIPGLVLALAFCTGIYLLAVFKPDYVGGADARAKMQDMPL
AEVMVKLAPVVILILAVIGGIYGGIFTPTEAAAVGTFFALLIAAARGRIT
GKIFKEILLETAAVSAVILFLIVAANLYTRQVALTGIP
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mRNA from alignment at P-wetherbeei_contig7808:33..1516-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7808.2.1 ID=mRNA_P-wetherbeei_contig7808.2.1|Name=mRNA_P-wetherbeei_contig7808.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1484bp|location=Sequence derived from alignment at P-wetherbeei_contig7808:33..1516- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCTCATCTGCATCGACGTGGCGTTGCGGACGGCCTTGAGCAAGCC GATTTCGGGCGTCGCGGAGTTCGTCTCCCTATCGGTCGTTGCCTGCGTCT TCCTGCAACTCCCCGCTCTGATCGCCGAACGCCGGTTGCTGCGCGCCGAA ATGTTCATCGAGCGGCTTGAGGCGCGCAATCCCCGCGCGGCCGCGCTGCT CAATTTCACCTATGCAGTGGTTGGCGTCTTCCTGTGCTGGAAGATCATGG CCTGGACGCTGCCCAAGCTGCTCGATGCCTGGGAGACCGGCGAGTACGCC GGAGCGCAAGGTGCATTCCAGATTCCGGTATGGCCGTTCAAGGTTGCCCT GCTGACGGGCGCGACACTCGGCTTCGTTCAATTCGTTTGGTCGGCGCTCG AACATATAGGAATCCTGAGCGNNNNNNNNNNCCTGATGCCCCTCCCCCAG GCGACGATGTCGGCGGATGGAAGCTCGGCGGCGTCACTGGTTGGCTCGTG GTTCTGGCTGCCATCTCTGGTTCGCTTCTCTACATGTACCTGTTGTTCAC AAGCGATCTCAAGCCGATCGAGGTTGGTGTATGGTGCCTTGCCGCCATGC TCGTGCTCGTATTCCTGGGTATGCCGATCCCGCTCGTTTTAATGGGGCTT TCCTACATCGGCATCTGGGTGGCGCGCGGCGGGGAGATGAACGCGCTCAA CACGCTGGGGCTTGCAGCCTGGAGCGCGGTCGGCTCCTACGAGTTCGGCA CTATCCCGCTTTTCATTATGATGGGCATCGTGCTGGAGAAGGCCGACGTC GGCCAGGATGCCTACAAGGTTGCGGCCGCTCTGCTCGGCCGACTTCGCGG TGGGCTCGGCATGGCGACCGTATTCGCCAACGCAATCTTCGCCTCTATCG TGGGTAGCTCTGTCGCCTCCGCTGCCGTGTTCAGCAAGATCGCGGTGCCG TCGATGGTGGAAAGCGGCTACACCAAGAAATTCTCGGTCGGCTGCGTCGC GGGTTCCTCGGTGCTGGGCATGCTGATCCCACCCAGTCTGCTGCTCATCA TCTATGGACTCGTCGCCGAAGAATCGGTCGGCAAGCTTTTCATCGCCGCG GTCATTCCGGGTCTCGTGCTGGCCCTCGCCTTCTGCACCGGCATCTACCT GCTGGCCGTCTTCAAGCCCGATTACGTCGGCGGCGCGGATGCCCGAGCCA AGATGCAAGATATGCCGCTGGCCGAGGTGATGGTGAAGCTGGCGCCCGTC GTTATCCTCATCCTCGCGGTGATCGGCGGCATCTATGGCGGCATCTTCAC GCCAACGGAGGCCGCCGCCGTAGGTACGTTTTTTGCGTTGTTGATTGCCG CCGCGCGTGGGCGAATCACGGGGAAGATCTTCAAGGAGATCCTTCTCGAG ACCGCAGCGGTTTCCGCCGTCATCCTGTTCCTGATCGTGGCGGCAAACCT ATACACGCGTCAGGTTGCACTGACCGGCATACCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7808:33..1516-

>mRNA_P-wetherbeei_contig7808.2.1 ID=mRNA_P-wetherbeei_contig7808.2.1|Name=mRNA_P-wetherbeei_contig7808.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1464bp|location=Sequence derived from alignment at P-wetherbeei_contig7808:33..1516- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCTCATCTGCATCGACGTGGCGTTGCGGACGGCCTTGAGCAAGCC
GATTTCGGGCGTCGCGGAGTTCGTCTCCCTATCGGTCGTTGCCTGCGTCT
TCCTGCAACTCCCCGCTCTGATCGCCGAACGCCGGTTGCTGCGCGCCGAA
ATGTTCATCGAGCGGCTTGAGGCGCGCAATCCCCGCGCGGCCGCGCTGCT
CAATTTCACCTATGCAGTGGTTGGCGTCTTCCTGTGCTGGAAGATCATGG
CCTGGACGCTGCCCAAGCTGCTCGATGCCTGGGAGACCGGCGAGTACGCC
GGAGCGCAAGGTGCATTCCAGATTCCGGTATGGCCGTTCAAGGTTGCCCT
GCTGACGGGCGCGACACTCGGCTTCGTTCAATTCGTTTGGAATCCTGAGC
GNNNNNNNNNNCCTGATGCCCCTCCCCCAGGCGACGATGTCGGCGGATGG
AAGCTCGGCGGCGTCACTGGTTGGCTCGTGGTTCTGGCTGCCATCTCTGG
TTCGCTTCTCTACATGTACCTGTTGTTCACAAGCGATCTCAAGCCGATCG
AGGTTGGTGTATGGTGCCTTGCCGCCATGCTCGTGCTCGTATTCCTGGGT
ATGCCGATCCCGCTCGTTTTAATGGGGCTTTCCTACATCGGCATCTGGGT
GGCGCGCGGCGGGGAGATGAACGCGCTCAACACGCTGGGGCTTGCAGCCT
GGAGCGCGGTCGGCTCCTACGAGTTCGGCACTATCCCGCTTTTCATTATG
ATGGGCATCGTGCTGGAGAAGGCCGACGTCGGCCAGGATGCCTACAAGGT
TGCGGCCGCTCTGCTCGGCCGACTTCGCGGTGGGCTCGGCATGGCGACCG
TATTCGCCAACGCAATCTTCGCCTCTATCGTGGGTAGCTCTGTCGCCTCC
GCTGCCGTGTTCAGCAAGATCGCGGTGCCGTCGATGGTGGAAAGCGGCTA
CACCAAGAAATTCTCGGTCGGCTGCGTCGCGGGTTCCTCGGTGCTGGGCA
TGCTGATCCCACCCAGTCTGCTGCTCATCATCTATGGACTCGTCGCCGAA
GAATCGGTCGGCAAGCTTTTCATCGCCGCGGTCATTCCGGGTCTCGTGCT
GGCCCTCGCCTTCTGCACCGGCATCTACCTGCTGGCCGTCTTCAAGCCCG
ATTACGTCGGCGGCGCGGATGCCCGAGCCAAGATGCAAGATATGCCGCTG
GCCGAGGTGATGGTGAAGCTGGCGCCCGTCGTTATCCTCATCCTCGCGGT
GATCGGCGGCATCTATGGCGGCATCTTCACGCCAACGGAGGCCGCCGCCG
TAGGTACGTTTTTTGCGTTGTTGATTGCCGCCGCGCGTGGGCGAATCACG
GGGAAGATCTTCAAGGAGATCCTTCTCGAGACCGCAGCGGTTTCCGCCGT
CATCCTGTTCCTGATCGTGGCGGCAAACCTATACACGCGTCAGGTTGCAC
TGACCGGCATACCC
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