mRNA_P-wetherbeei_contig78.8.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: A0A836CFV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV7_9STRA) HSP 1 Score: 121 bits (303), Expect = 6.940e-33 Identity = 71/108 (65.74%), Postives = 86/108 (79.63%), Query Frame = 1
Query: 7 TALAMDLDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGDLSENVAAKLSAKLLEDADMDETDVESVTDRMRKALMADQTAEQEKEMQDK-IAAKKTEEEDDGW 327
TA+AM++DQNTI+GIAAGVGGLALGIGLVAFTEQQG +TA RG + E +A KL AKLLED +++E DV SVTDRMR AL D+T E+ E+ K +AA+ E EDDGW
Sbjct: 52 TAIAMEMDQNTIIGIAAGVGGLALGIGLVAFTEQQGVKTAERG-IDEGMANKLQAKLLEDFELEENDVTSVTDRMRAALKQDKTEEELAELAAKQLAARSKEREDDGW 158
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: A0A6S9FQI8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FQI8_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 5.350e-16 Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 7 TALAMDLDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGDLSENVAAKLSAKLLEDADMDE-TDVESVTDRMRKALMADQTAEQEK-EMQDKIAAKKTEEEDDGW 327
T+L M +DQN I+G A GVGG A GIGL+AFTE QGERT RG LSE+++ +++ LLED ++D +D+ S+T ++ AL + + + EM ++ K ++ DDGW
Sbjct: 50 TSLCM-VDQNVIMGTAIGVGGFAFGIGLIAFTEAQGERTKERGGLSESMSTRIAGALLEDVEVDSVSDLGSLTSQLEAALKETGSKDLDNLEMTEEEKQKMIDDADDGW 157
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: A0A1Z5KBT4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBT4_FISSO) HSP 1 Score: 75.5 bits (184), Expect = 3.930e-15 Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 1 RKTALAMDLDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGD-LSENVAAKLSAKLLEDADMDETD-VESVTDRMRKALMADQTAEQEKEMQDKIAAKKTEEEDDGW 327
R T +DQN ++G A GVGGLA GIGLVAFTEQQGER RG LSE+++ +++ LLED ++ D + S+T ++ AL + E+ ++ K E+ DDGW
Sbjct: 29 RSTTSLQMVDQNVLLGAAVGVGGLAFGIGLVAFTEQQGERAKERGGGLSESMSTRIAGGLLEDVEVSSVDDLGSLTAQLENALRQTGKTGESFEVSEEAKRKALEDADDGW 139
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: B7FYG2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYG2_PHATC) HSP 1 Score: 70.5 bits (171), Expect = 4.380e-13 Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 10 ALAMDLDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGD-LSENVAAKLSAKLLEDADMDET-DVESVTDRMRKALMADQTAEQEK-EMQDKIAAKKTEEEDDGW 327
AL ++LDQ + GI GV GLA G+GLVAFTE QGER RG LSE ++ +++ LLED ++ D+ S+T ++ KAL A+ E EM ++ + +E DDGW
Sbjct: 41 ALNLELDQQVLQGIGIGVAGLAAGVGLVAFTEAQGERAKERGGGLSEGMSTRITGGLLEDVEVSSVEDLGSLTSQLEKALRESGGAKDEVFEMTEEEKKRIQDEADDGW 149
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: A0A7R9ZNS2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZNS2_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.890e-12 Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 1
Query: 25 LDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGD-LSENVAAKLSAKLLEDADMDET-DVESVTDRMRKALMADQ-TAEQEKEMQDKIAAKKTEEEDDGW 327
+D ++G G+ GL GIGLVAFTEQQGER RG LS+N+ +LS L+ED ++ D+ S+TD++ AL A T E++ +M ++ + EE DDGW
Sbjct: 50 IDDGYLMGAGIGIAGLVAGIGLVAFTEQQGERAKERGSGLSDNMNTQLSGMLMEDVEVSSVADIGSLTDQLEAALKASGGTDEKDLKMTEEEKKRIAEEADDGW 153
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: A0A6U0FCW0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0FCW0_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.220e-12 Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 7 TALAMDLDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGD-LSENVAAKLSAKLLEDADMDE-TDVESVTDRMRKALMADQTAEQEK-EMQDKIAAKKTEEEDDGW 327
T+L M +DQN I G A G+GG A+GIGLVAF E QGER RG +S++++ +++ LLED ++D +D+ S+T ++ AL E + EM ++ K EE DDGW
Sbjct: 70 TSLKM-VDQNIIYGAAIGIGGFAVGIGLVAFAEAQGERAKERGGGISDSMSTRIAGGLLEDVEVDSVSDLGSLTSQLEAALKETGAKEADNLEMTEEEKKKIAEEADDGW 178
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: A0A7S1GJC5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJC5_CYCTE) HSP 1 Score: 68.2 bits (165), Expect = 6.270e-12 Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 25 LDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGD-LSENVAAKLSAKLLEDADMDE-TDVESVTDRMRKALMADQTA-EQEKEMQDKIAAKKTEEEDDGW 327
+DQ+ I G A VGGLA+GIGLVAFTE QGER RG +SE +A +++ +L+ED ++ +D+ S+T ++ AL A E E +M ++ + EE DDGW
Sbjct: 76 VDQSVIEGAAIAVGGLAVGIGLVAFTEAQGERARERGSGISEGMATRIAGQLMEDVEVSSVSDLGSLTSQLEAALKETGGASETELKMSEEDKERIAEEADDGW 179
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: A0A7S1TQH8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQH8_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 6.800e-12 Identity = 49/105 (46.67%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 25 LDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGDLSENVAAKLSAKLLEDADMDET-DVESVTDRMRKALMA--DQTAEQE-KEMQDKIAAKKTEEEDDGW 327
+D + ++G +G +A G+GL+AFTEQQGERT+ RG LS + +LSAKLLED + DE+ ++ +T+RM AL A D T E + KE+ K E EDDGW
Sbjct: 37 MDNSILIGGTVLLGTIA-GVGLIAFTEQQGERTSQRGGLSGEMTDRLSAKLLEDYESDESGEISQLTERMEAALRAQGDGTLETDGKEV-------KVEVEDDGW 133
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: A0A8J6C9X7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9X7_DIALT) HSP 1 Score: 61.2 bits (147), Expect = 1.390e-9 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 25 LDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGDLSENVAAKLSAKLLEDADMDETD-VESVTDRMRKAL 243
+DQN +VG A G+ G G+ LVAFTEQ GERT ARG LS AAK + K +ED ++D++ ++ + +M AL
Sbjct: 43 IDQNILVGGAIGLVGTLGGVALVAFTEQAGERTNARGALSSEQAAKFAGKFMEDEEVDQSGTIDDIVAKMEAAL 116
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Match: A0A7S4ECZ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECZ2_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 9.860e-9 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 25 LDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGD--LSENVAAKLSAKLLEDADMDETDVESVTDRMRKALMADQTAEQEKEMQDKIAAKKTEEEDDGW 327
LD I G AA VGGLA+G+G+ F+EQQ E+ RG +SE AK+SA +ED + +T ++ RM AL A A+ E +++K+ K DDGW
Sbjct: 55 LDAAVIQGGAAAVGGLAVGLGMAWFSEQQVEQGEQRGSDAVSEATRAKMSAMFMEDEVLPDTTLDDTVSRMEAALAA---AKGEAAVEEKVEEKPASSIDDGW 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig78.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig78.8.1 >prot_P-wetherbeei_contig78.8.1 ID=prot_P-wetherbeei_contig78.8.1|Name=mRNA_P-wetherbeei_contig78.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp MDLDQNTIVGIAAGVGGLALGIGLVAFTEQQGERTAARGDLSENVAAKLSback to top mRNA from alignment at P-wetherbeei_contig78:8120..9024+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig78.8.1 ID=mRNA_P-wetherbeei_contig78.8.1|Name=mRNA_P-wetherbeei_contig78.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=905bp|location=Sequence derived from alignment at P-wetherbeei_contig78:8120..9024+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig78:8120..9024+ >mRNA_P-wetherbeei_contig78.8.1 ID=mRNA_P-wetherbeei_contig78.8.1|Name=mRNA_P-wetherbeei_contig78.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig78:8120..9024+ (Phaeothamnion wetherbeei SAG_119_79)back to top |