mRNA_P-wetherbeei_contig7792.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7792.1.1
Unique NamemRNA_P-wetherbeei_contig7792.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: D2UX95_NAEGR (Sodium/potassium-transporting ATPase subunit alpha (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UX95_NAEGR)

HSP 1 Score: 97.4 bits (241), Expect = 8.100e-22
Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 1
Query:    1 QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQSPLAQEIRVFV 243
            +VDNS LTGEA+PQ R  E+  + PLE  NLAFFGTT+L+G G G+VIRCG+ TV+G IA LAGT   L++PL +EI  FV
Sbjct:  194 KVDNSSLTGEADPQSRTSESSSSNPLETANLAFFGTTVLDGSGYGIVIRCGNVTVIGQIALLAGTAPTLKTPLRREIDNFV 274          
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: A0A836CCV5_9STRA (Cation_ATPase_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV5_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.820e-21
Identity = 53/81 (65.43%), Postives = 60/81 (74.07%), Query Frame = 1
Query:    4 VDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQ-SPLAQEIRVFV 243
            VDNS LTGE EPQ R V A     LEAENLAF GTT++NGRG+GVVIR GDA+++G IA LAG   E + SPLA EIR FV
Sbjct:  222 VDNSNLTGENEPQKRTVSADSMAVLEAENLAFMGTTVVNGRGVGVVIRRGDASILGRIASLAGAPKEEELSPLALEIRSFV 302          
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: A0A6A5BWA8_NAEFO (Cation_ATPase_N domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BWA8_NAEFO)

HSP 1 Score: 95.5 bits (236), Expect = 3.850e-21
Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 1
Query:    1 QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQSPLAQEIRVFV 243
            +VDNS LTGE++PQ R  E+  + PLE  NLAFFGTT+L G G G+VIRCG+ TV+G IA LAGT   L++PL +EI  FV
Sbjct:  278 KVDNSSLTGESDPQVRTSESSSSNPLETANLAFFGTTVLEGSGYGIVIRCGNVTVIGQIALLAGTTVTLKTPLRREIDNFV 358          
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: A0A5B7LGW8_9HYME (Sodium potassium adenosine triphosphate (Fragment) n=2 Tax=Perditomorpha TaxID=395683 RepID=A0A5B7LGW8_9HYME)

HSP 1 Score: 88.6 bits (218), Expect = 6.170e-21
Identity = 45/81 (55.56%), Postives = 55/81 (67.90%), Query Frame = 1
Query:    1 QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQSPLAQEIRVFV 243
            +VDNS LTGE+EPQ R+ E  H  PLE +NLAFF T  + G   GVVI CGD TVMG IA LA   N  ++P+A+EI  F+
Sbjct:   41 KVDNSSLTGESEPQSRSPEFTHENPLETKNLAFFSTNAVEGTAKGVVICCGDQTVMGRIAGLASGLNTGETPIAKEIHHFI 121          
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: H2Z2K9_CIOSA (Sodium/potassium-transporting ATPase subunit alpha n=3 Tax=Ciona savignyi TaxID=51511 RepID=H2Z2K9_CIOSA)

HSP 1 Score: 94.7 bits (234), Expect = 7.160e-21
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 1
Query:    1 QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQSPLAQEIRVFV 243
            +VDNS LTGEAEPQ R +E  H  PLE +N+AFF T  + G G G+VI+CGD TVMG IA LA   +  Q+P+A+EI  F+
Sbjct:  195 KVDNSSLTGEAEPQARGIECTHDNPLETKNIAFFSTNCVEGSGQGIVIKCGDHTVMGRIATLASGLSSGQTPIAREIAHFI 275          
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: B5DLK6_DROPS (Sodium/potassium-transporting ATPase subunit alpha n=3 Tax=pseudoobscura subgroup TaxID=32358 RepID=B5DLK6_DROPS)

HSP 1 Score: 93.6 bits (231), Expect = 1.820e-20
Identity = 47/81 (58.02%), Postives = 58/81 (71.60%), Query Frame = 1
Query:    1 QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQSPLAQEIRVFV 243
            +VDNS LTGE+EPQ R+ E  H  PLE +NLAFF T +L G   GVVI CGD TVMG IA LA   +E+QSP+++EI  F+
Sbjct:  199 KVDNSSLTGESEPQVRSPEYTHENPLETKNLAFFSTNVLEGTCRGVVISCGDNTVMGRIANLAAGLDEVQSPISREIERFI 279          
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: B4GW93_DROPE (GL16518 n=1 Tax=Drosophila persimilis TaxID=7234 RepID=B4GW93_DROPE)

HSP 1 Score: 93.6 bits (231), Expect = 1.850e-20
Identity = 47/81 (58.02%), Postives = 58/81 (71.60%), Query Frame = 1
Query:    1 QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQSPLAQEIRVFV 243
            +VDNS LTGE+EPQ R+ E  H  PLE +NLAFF T +L G   GVVI CGD TVMG IA LA   +E+QSP+++EI  F+
Sbjct: 1382 KVDNSSLTGESEPQVRSPEYTHENPLETKNLAFFSTNVLEGTCRGVVISCGDNTVMGRIANLAAGLDEVQSPISREIERFI 1462          
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: A0A5B7LGW2_9HYME (Sodium potassium adenosine triphosphate (Fragment) n=1 Tax=Sarocolletes guaritarum TaxID=2510380 RepID=A0A5B7LGW2_9HYME)

HSP 1 Score: 87.8 bits (216), Expect = 3.220e-20
Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 1
Query:    1 QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQSPLAQEIRVFV 243
            +VDNS LTGE+EPQ R+ E  H  PLE +NLAFF T  + G   GVVI CGD TVMG IA +A   N  ++P+A+EI  F+
Sbjct:   71 KVDNSSLTGESEPQSRSPEFTHENPLETKNLAFFSTNAVEGTAKGVVICCGDQTVMGRIAGIASGLNTGETPIAKEIHHFI 151          
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: A0A7S1PH34_9EUKA (Sodium/potassium-transporting ATPase subunit alpha n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1PH34_9EUKA)

HSP 1 Score: 92.8 bits (229), Expect = 3.400e-20
Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 1
Query:    1 QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQSPLAQEIRVFV 243
            +V+NS LTGE+EPQ RA E+ H  PLE  NL FFG+ + NG G+GV++R GD TVMGNIA+LA +    ++PL  EI  FV
Sbjct:  256 KVNNSSLTGESEPQTRAPESSHANPLETANLVFFGSFIANGSGIGVIVRTGDNTVMGNIAKLASSTGNEKTPLRIEIEYFV 336          
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Match: E4XUM7_OIKDI (Sodium/potassium-transporting ATPase subunit alpha n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XUM7_OIKDI)

HSP 1 Score: 92.4 bits (228), Expect = 4.600e-20
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 1
Query:    1 QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRCGDATVMGNIAELAGTDNELQSPLAQEIRVFV 243
            +VDNS LTGE+EPQPR  E   T+ LE++NLAFF T  + G  +G+VIRCGD TVMG IA LA   +   +P+AQEI  F+
Sbjct:  188 KVDNSSLTGESEPQPRDAEDSETEVLESKNLAFFSTNCIEGSALGIVIRCGDNTVMGRIAALASNVDSGDTPIAQEIERFI 268          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7792.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D2UX95_NAEGR8.100e-2260.49Sodium/potassium-transporting ATPase subunit alpha... [more]
A0A836CCV5_9STRA2.820e-2165.43Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A6A5BWA8_NAEFO3.850e-2159.26Cation_ATPase_N domain-containing protein n=1 Tax=... [more]
A0A5B7LGW8_9HYME6.170e-2155.56Sodium potassium adenosine triphosphate (Fragment)... [more]
H2Z2K9_CIOSA7.160e-2155.56Sodium/potassium-transporting ATPase subunit alpha... [more]
B5DLK6_DROPS1.820e-2058.02Sodium/potassium-transporting ATPase subunit alpha... [more]
B4GW93_DROPE1.850e-2058.02GL16518 n=1 Tax=Drosophila persimilis TaxID=7234 R... [more]
A0A5B7LGW2_9HYME3.220e-2054.32Sodium potassium adenosine triphosphate (Fragment)... [more]
A0A7S1PH34_9EUKA3.400e-2055.56Sodium/potassium-transporting ATPase subunit alpha... [more]
E4XUM7_OIKDI4.600e-2055.56Sodium/potassium-transporting ATPase subunit alpha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7792contigP-wetherbeei_contig7792:2267..2786 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog5762.XP_002683336.1
PFAMsCation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase
Model size243
Max annot lvl2759|Eukaryota
KEGG koko:K01539,ko:K01544
KEGG TC3.A.3.1,3.A.3.1.4
KEGG Pathwayko00190,ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map00190,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.33e-22
EggNOG OGsCOG0474@1|root,KOG0203@2759|Eukaryota
EC3.6.3.10,3.6.3.9
Descriptionsodium:potassium-exchanging ATPase activity
Cds size243
COG categoryP
BRITEko00000,ko00001,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187000.9112349-CDS-P-wetherbeei_contig7792:2266..23581683187000.9112349-CDS-P-wetherbeei_contig7792:2266..2358Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7792 2267..2358 -
1683187000.922164-CDS-P-wetherbeei_contig7792:2635..27861683187000.922164-CDS-P-wetherbeei_contig7792:2635..2786Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7792 2636..2786 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7792.1.1prot_P-wetherbeei_contig7792.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7792 2267..2786 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7792.1.1

>prot_P-wetherbeei_contig7792.1.1 ID=prot_P-wetherbeei_contig7792.1.1|Name=mRNA_P-wetherbeei_contig7792.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp
QVDNSGLTGEAEPQPRAVEALHTQPLEAENLAFFGTTLLNGRGMGVVIRC
GDATVMGNIAELAGTDNELQSPLAQEIRVFV
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mRNA from alignment at P-wetherbeei_contig7792:2267..2786-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7792.1.1 ID=mRNA_P-wetherbeei_contig7792.1.1|Name=mRNA_P-wetherbeei_contig7792.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=520bp|location=Sequence derived from alignment at P-wetherbeei_contig7792:2267..2786- (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGGACAACTCGGGGCTGACCGGAGAGGCAGAGCCGCAGCCGCGCGC GGTGGAGGCGCTCCACACACAGCCGCTGGAGGCGGAGAACCTCGCCTTCT TCGGCACCACGCTGCTTAATGGCCGTGGGATGGGCGTTGTCATCCGCTGC GGTGCGTCTTTCGTCTGACTTTTGCAGATGTGGATGGAAAAAGAATTTTT AAGCGAAATTTGTGATTTATGAAGAAAAGTTGCCGTTCGTCCGCTAGGTC TATTTGGGCTTACCCCATTTCTGTTTGCTGTGTTTTGCCATCGAGGAAGT GGTATGTTGTCTGTTCTGCTGTGACTTTGTAGTGCTTAAGTCGTTTGGTA GATCTAGCGTGCCTCTTTCCGCTTACAAACGCCGGACAGAAATACGTTCT GCGACCGCGTGTGCATGCGTCCCTCCAGGCGACGCAACGGTGATGGGCAA CATTGCCGAGCTTGCCGGCACTGATAACGAGCTGCAGAGTCCGCTGGCGC AGGAGATCCGCGTCTTCGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7792:2267..2786-

>mRNA_P-wetherbeei_contig7792.1.1 ID=mRNA_P-wetherbeei_contig7792.1.1|Name=mRNA_P-wetherbeei_contig7792.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig7792:2267..2786- (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGGACAACTCGGGGCTGACCGGAGAGGCAGAGCCGCAGCCGCGCGC
GGTGGAGGCGCTCCACACACAGCCGCTGGAGGCGGAGAACCTCGCCTTCT
TCGGCACCACGCTGCTTAATGGCCGTGGGATGGGCGTTGTCATCCGCTGC
GGCGACGCAACGGTGATGGGCAACATTGCCGAGCTTGCCGGCACTGATAA
CGAGCTGCAGAGTCCGCTGGCGCAGGAGATCCGCGTCTTCGTC
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