mRNA_P-wetherbeei_contig776.6.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig776.6.3
Unique NamemRNA_P-wetherbeei_contig776.6.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: D7FLY8_ECTSI (Endothelial protein B9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY8_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.540e-57
Identity = 109/270 (40.37%), Postives = 133/270 (49.26%), Query Frame = 1
Query:    4 QFPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARKGNGSEQCVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQPLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATRGMAAFGYD 813
            +F   DNLYCRY  SFG+DW +VHG+DTGLSQ+A++  G +  VVWNFPI+++FKSTNAFGWPRIA+SV                                                              F V                                            D +GRD VVGYG++L+PT  GR+ R  H+YAP  SS +QR  +W +G+YPEFFDSKFVTR EGREVTRVRR G V+VSLDV TRGM  FGY+
Sbjct:   67 EFGSLDNLYCRYTLSFGNDWYIVHGLDTGLSQIAQRAGGQDTSVVWNFPIDVTFKSTNAFGWPRIALSV--------------------------------------------------------------FRV--------------------------------------------DDMGRDTVVGYGSVLIPTQAGRHERVAHMYAPQPSSMLQRFRAWVSGAYPEFFDSKFVTRGEGREVTRVRRSGTVKVSLDVMTRGMVDFGYN 230          
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: A0A7S1U318_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U318_9STRA)

HSP 1 Score: 177 bits (448), Expect = 4.030e-51
Identity = 99/269 (36.80%), Postives = 128/269 (47.58%), Query Frame = 1
Query:    7 FPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARKGNGSEQCVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQPLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATRGMAAFGYD 813
            F G DNLYCRY+  FG DW++ HG D+GLSQ+AR+G G +  +VWNFPI+ +FKSTN FGWPRIAISV G                                                                                                          +D LGRDV+ GYG++++PT PG+Y R VH+YAP++SS  Q+L +W  G+ PEFFDS F  +  GR+VTRVR  G V+V+L+V  RG+AAFGYD
Sbjct:   35 FDGADNLYCRYSLVFGHDWTVCHGPDSGLSQIARRGGGVDPALVWNFPIDATFKSTNPFGWPRIAISVYG----------------------------------------------------------------------------------------------------------VDGLGRDVIKGYGSVVIPTCPGKYERVVHMYAPVSSSLAQQLLAWIGGTPPEFFDSSFTAQGTGRDVTRVRACGTVRVTLNVLPRGLAAFGYD 197          
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: A0A7S1U2U9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2U9_9STRA)

HSP 1 Score: 177 bits (448), Expect = 4.820e-51
Identity = 99/269 (36.80%), Postives = 128/269 (47.58%), Query Frame = 1
Query:    7 FPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARKGNGSEQCVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQPLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATRGMAAFGYD 813
            F G DNLYCRY+  FG DW++ HG D+GLSQ+AR+G G +  +VWNFPI+ +FKSTN FGWPRIAISV G                                                                                                          +D LGRDV+ GYG++++PT PG+Y R VH+YAP++SS  Q+L +W  G+ PEFFDS F  +  GR+VTRVR  G V+V+L+V  RG+AAFGYD
Sbjct:   35 FDGADNLYCRYSLVFGHDWTVCHGPDSGLSQIARRGGGVDPALVWNFPIDATFKSTNPFGWPRIAISVYG----------------------------------------------------------------------------------------------------------VDGLGRDVIKGYGSVVIPTCPGKYERVVHMYAPVSSSLAQQLLAWIGGTPPEFFDSSFTAQGTGRDVTRVRACGTVRVTLNVLPRGLAAFGYD 197          
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: F0YE40_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE40_AURAN)

HSP 1 Score: 163 bits (412), Expect = 3.360e-46
Identity = 99/269 (36.80%), Postives = 121/269 (44.98%), Query Frame = 1
Query:    4 QFPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARKGNGSEQCVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQPLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATRGMAAFGY 810
            +FP  D+LY RY FSFG DW++V G++TGLSQ+ARK  G +Q VVWNFP++ISFKSTNA GWPR++ISV G                                                                                                          +D LGRDVV GYG++L+P  PG Y R +H Y P+ SS  QR  SW  G+Y EF+DSKFV + E REVTRV   G V+V  DV TRGM   GY
Sbjct:   29 EFPD-DDLYVRYGFSFGPDWTVVDGIETGLSQIARKAPGVDQSVVWNFPVDISFKSTNAHGWPRMSISVYG----------------------------------------------------------------------------------------------------------VDGLGRDVVRGYGSVLIPPFPGGYDRYIHTYVPVPSSLWQRFVSWFTGTYAEFYDSKFVAQGENREVTRVESTGVVKVKFDVLTRGMETLGY 190          
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: A0A836CI87_9STRA (B9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI87_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.670e-46
Identity = 99/263 (37.64%), Postives = 127/263 (48.29%), Query Frame = 1
Query:    4 QFPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARK-GNGSEQCVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQPLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATR 789
            +F G+DNLY RYA SFG DW+++HG++TGLSQ+AR+ G+G E   VWNFPI+++ KST AFGWPR+A+SV                                                                                                           A+D+LGRD VVGY ++LVP  PG + + V+ YAP ASS +QR+  W AG+YPEFFD K V RSEGREVTRV+R+GRV+VSL V TR
Sbjct:   14 EFSGYDNLYVRYALSFGHDWTVLHGLETGLSQMARRSGSGGE--AVWNFPIDVALKSTCAFGWPRLALSVY----------------------------------------------------------------------------------------------------------AVDALGRDAVVGYASVLVPPTPGPHAQWVYTYAPKASSILQRVRGWIAGAYPEFFDPKLVARSEGREVTRVQRRGRVRVSLTVMTR 168          
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: A0A1A6GHJ9_NEOLE (Uncharacterized protein n=1 Tax=Neotoma lepida TaxID=56216 RepID=A0A1A6GHJ9_NEOLE)

HSP 1 Score: 160 bits (406), Expect = 3.680e-44
Identity = 100/280 (35.71%), Postives = 143/280 (51.07%), Query Frame = 1
Query:    1 AQFPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARKGNGSEQCVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQPLGEGIGFLLPQLTPD--DVLLHIPRGFSCTCQSFLVRGADGGGLSP-----TRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATRGMAAFGYDAG 819
            AQFP +D+LYC+Y F +G DW+   G++ G+SQ+A K     Q +VWNFPI+++FKSTN +G      S+S R    P++              P   ++     +    P L P   + LL    G +  C   LV       L+      T  +   SSP + T+  L     G   +  V   D  G DVV GYGA+ VP +PGR++R + ++ P ++S +Q+  SW  G  PE+ D K V + EGREVTRVR QG V +  +V T+ M   GYD G
Sbjct:   20 AQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQIASKSQDVRQALVWNFPIDVTFKSTNPYG------SMSERMESAPRA--------------PAESSRGQKSRVWTGFPGLRPSSCESLLQTSAGHTMDCTPSLVSPRANLVLTRATARHTMTAHLPSSPHVPTLSSL-----GPQIVLSVYGPDVFGNDVVRGYGAVHVPFSPGRHKRTIPMFVPESTSTLQKFTSWFMGRRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVTKDMKKLGYDTG 274          
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: A0A8J2WZC0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZC0_9STRA)

HSP 1 Score: 159 bits (401), Expect = 4.680e-44
Identity = 96/269 (35.69%), Postives = 122/269 (45.35%), Query Frame = 1
Query:    4 QFPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARKGNGSEQCVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQPLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATRGMAAFGY 810
            +FP +D+LY RY FSFG DW++V G++ GLSQ+ARK  G +  VVWNFP++ISFKSTNA GWPR+++S+ G                                                                                                          +DSLGRDVV GYG++L+P   G Y R +H Y P+ SS  QRL SW  G+Y EF+DSK V +S+ REVTRV   G V+V   V TRGMAA GY
Sbjct:   69 EFP-YDDLYVRYGFSFGPDWTVVDGIENGLSQIARKAAGCDNSVVWNFPVDISFKSTNAHGWPRMSVSIYG----------------------------------------------------------------------------------------------------------VDSLGRDVVRGYGSVLLPPFAGDYERYIHTYIPVPSSLWQRLVSWLTGTYAEFYDSKLVAQSDNREVTRVESTGVVKVKFSVLTRGMAALGY 230          
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: A0A7S2BJK9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BJK9_9STRA)

HSP 1 Score: 157 bits (396), Expect = 3.460e-43
Identity = 93/276 (33.70%), Postives = 125/276 (45.29%), Query Frame = 1
Query:    7 FPGWDNLYCRYAFSFGSDWSMVHGMD---TGLSQLARKGNGSEQ-----CVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQPLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATRGMAAFGY 810
            F G DNLYC+Y+FS+G DW++V G+D    GLSQ+A+KG+          VVWNFPI+++FKSTNAFGWPRI+ +V G                                                                                                          +D+LGRD   GYG++LVPT PG Y++ + +YAP+ SSW QR+ +   G+YPEFFD+KFV++   REVTRV   G V+V + VAT+ M  FGY
Sbjct:   43 FGGADNLYCKYSFSYGHDWTVVTGLDGVTAGLSQIAKKGSAGMDNTFGGSVVWNFPIDVAFKSTNAFGWPRISFTVYG----------------------------------------------------------------------------------------------------------IDALGRDKTYGYGSMLVPTQPGHYQKEIEMYAPMPSSWYQRILNGITGTYPEFFDTKFVSQGSNREVTRVESTGSVKVQVQVATKDMQKFGY 212          
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: UPI0003840DA1 (B9 domain-containing protein 1 isoform X1 n=2 Tax=Bovinae TaxID=27592 RepID=UPI0003840DA1)

HSP 1 Score: 152 bits (384), Expect = 4.750e-41
Identity = 97/282 (34.40%), Postives = 144/282 (51.06%), Query Frame = 1
Query:    1 AQFPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARKGNGSEQCVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCL---------PLYFPLLVTQPLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATRGMAAFGYDAG 819
            AQFP +D+LYC+Y F +G DW+   G++ G+SQ+  K   + + +VWNFPI+++FKSTN +G    +  V   +PE   S       DCL            +PL  + P    I  +LP +    +LL  P          L +G   G L+P  + +    P +   ++ P               D  G DVV GYGA+ VP +PGR+++ + ++ P ++S +Q+  SW  G  PE+ D K V + EGREVTRVR QG V +  +V T+ M   GYD G
Sbjct:   20 AQFPEYDDLYCKYCFVYGQDWAPTAGLEEGISQITSKSQDARRALVWNFPIDVTFKSTNPYG---CSDEVGEAQPETLSS-------DCLRRAEPGDWGSAVWPLNGSPP---SITAVLPPVPSPLLLLQDPA---------LSQGIPHG-LTPALSFE---GPQIVLSVYGP---------------DVFGNDVVRGYGAVHVPLSPGRHKKTIPMFVPESTSKLQKFTSWFMGRRPEYTDPKVVAQGEGREVTRVRSQGFVTLLFNVVTKDMRKLGYDTG 260          
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Match: A0A7S1CLA7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLA7_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.100e-40
Identity = 92/273 (33.70%), Postives = 119/273 (43.59%), Query Frame = 1
Query:    4 QFPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARKGNGSEQCVVWNFPIEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQPLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQPISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPGRYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRRQGRVQVSLDVATRGMAAFGYDAGG 822
            +F   + LYC++  + G DW +V G   GLSQ+A+K  G +  VVWN+PI++SFK+TNAFGWPR+ +SV                                                              F V                                            D+LGRDV+ GYGAL VPT PGRY R V  + P +SS  Q   +W  G+ PEFF+ KFV++ EGREVTRVR  G VQV ++V TRGM+  GY  GG
Sbjct:   30 EFSDGEKLYCKFDVACGPDWKVVQGHAQGLSQVAKKAAGGDDGVVWNYPIDVSFKATNAFGWPRLVLSV--------------------------------------------------------------FEV--------------------------------------------DALGRDVIRGYGALHVPTVPGRYTRFVRTFTPASSSLFQEFTAWLTGNRPEFFNPKFVSQGEGREVTRVRSTGVVQVDINVLTRGMSEHGYATGG 196          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig776.6.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLY8_ECTSI1.540e-5740.37Endothelial protein B9 n=1 Tax=Ectocarpus siliculo... [more]
A0A7S1U318_9STRA4.030e-5136.80Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U2U9_9STRA4.820e-5136.80Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
F0YE40_AURAN3.360e-4636.80Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A836CI87_9STRA3.670e-4637.64B9 domain-containing protein n=1 Tax=Tribonema min... [more]
A0A1A6GHJ9_NEOLE3.680e-4435.71Uncharacterized protein n=1 Tax=Neotoma lepida Tax... [more]
A0A8J2WZC0_9STRA4.680e-4435.69Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2BJK9_9STRA3.460e-4333.70Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
UPI0003840DA14.750e-4134.40B9 domain-containing protein 1 isoform X1 n=2 Tax=... [more]
A0A7S1CLA7_9STRA3.100e-4033.70Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig776contigP-wetherbeei_contig776:7071..8217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FLY8
Preferred nameB9D1
PFAMsB9-C2
Model size859
Max annot lvl2759|Eukaryota
KEGG koko:K16744
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0001701,GO:0001944,GO:0002065,GO:0003674,GO:0004888,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007423,GO:0007568,GO:0007610,GO:0008104,GO:0008150,GO:0008158,GO:0008340,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009987,GO:0010259,GO:0015630,GO:0016020,GO:0016043,GO:0022406,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030326,GO:0030537,GO:0030855,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035107,GO:0035108,GO:0035113,GO:0035177,GO:0035869,GO:0036038,GO:0036064,GO:0038023,GO:0042733,GO:0042995,GO:0043009,GO:0043010,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0048513,GO:0048598,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051640,GO:0051641,GO:0051716,GO:0060089,GO:0060173,GO:0060271,GO:0060429,GO:0060563,GO:0060756,GO:0061512,GO:0065007,GO:0070727,GO:0070925,GO:0071840,GO:0072358,GO:0072359,GO:0097711,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:1904491,GO:1905515
Exons2
Evalue2.52e-58
EggNOG OGsKOG4027@1|root,KOG4027@2759|Eukaryota
Ec32 ortholog descriptionB9 domain
Ec32 orthologEc-22_000220.1
Descriptionhedgehog receptor activity
Cds size858
COG categoryS
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186999.530538-CDS-P-wetherbeei_contig776:7071..72391683186999.530538-CDS-P-wetherbeei_contig776:7071..7239Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig776 7072..7239 -
1683186999.5435495-CDS-P-wetherbeei_contig776:7527..82171683186999.5435495-CDS-P-wetherbeei_contig776:7527..8217Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig776 7528..8217 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig776.6.3prot_P-wetherbeei_contig776.6.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig776 7072..8217 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig776.6.3

>prot_P-wetherbeei_contig776.6.3 ID=prot_P-wetherbeei_contig776.6.3|Name=mRNA_P-wetherbeei_contig776.6.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp
AQFPGWDNLYCRYAFSFGSDWSMVHGMDTGLSQLARKGNGSEQCVVWNFP
IEISFKSTNAFGWPRIAISVSGRKPERPQSRSPAIFFDCLPLYFPLLVTQ
PLGEGIGFLLPQLTPDDVLLHIPRGFSCTCQSFLVRGADGGGLSPTRNSQ
PISSPSLFTVLFLPTCCRGHSTLHQVCALDSLGRDVVVGYGALLVPTAPG
RYRRAVHLYAPLASSWMQRLWSWAAGSYPEFFDSKFVTRSEGREVTRVRR
QGRVQVSLDVATRGMAAFGYDAGGWSGGAGASAIAQ
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mRNA from alignment at P-wetherbeei_contig776:7071..8217-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig776.6.3 ID=mRNA_P-wetherbeei_contig776.6.3|Name=mRNA_P-wetherbeei_contig776.6.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1147bp|location=Sequence derived from alignment at P-wetherbeei_contig776:7071..8217- (Phaeothamnion wetherbeei SAG_119_79)
GCACAGTTTCCCGGCTGGGACAACCTCTACTGCCGGTACGCGTTCAGCTT CGGGAGCGATTGGTCCATGGTCCACGGCATGGATACGGGCCTCTCGCAAC TTGCGAGAAAAGGGAATGGCAGCGAGCAGTGCGTGGTGTGGAACTTTCCC ATAGAGATTAGCTTCAAGTCGACAAACGCCTTCGGCTGGCCACGGATAGC GATAAGCGTGAGTGGAAGAAAGCCCGAGCGCCCGCAGTCTCGATCGCCGG CGATATTTTTTGACTGCCTGCCGCTGTATTTCCCGTTGCTCGTGACGCAG CCATTAGGTGAAGGCATAGGCTTTTTGCTTCCTCAGCTGACCCCCGACGA TGTCCTACTGCATATTCCAAGAGGGTTCTCGTGCACTTGCCAATCCTTCC TGGTCCGGGGGGCGGATGGGGGGGGGCTTTCTCCGACCCGAAACTCACAA CCCATCTCTTCCCCTTCCCTCTTCACGGTTCTGTTCCTCCCCACTTGCTG CCGTGGTCATTCCACCCTGCACCAGGTCTGCGCCCTGGACAGCCTGGGAC GGGATGTGGTGGTCGGCTACGGGGCGCTGCTGGTGCCGACGGCGCCCGGC CGCTACCGCCGCGCCGTCCACTTGTACGCTCCGCTGGCGTCGTCGTGGAT GCAGCGGCTCTGGTCGTGGGCCGCCGGATCCTACCCGGAGGTCGGTTAGA CACGGCGTTTCGGTCAGGAATTCGTCGCGCTTTTTGATTGGCGGATGCTG TGCTGCGCTTGACTATCTCGCGGCCCGTAACGGCGGGCGGAACGTAAAGT CGCAGTTGGCATGATTGCCAATCTGCAGGCTGCCTGCCTCGTTTCAATTT AAACAGCTTCGTGTGCTTCACTGTCCCATCCTCTCTCCTTTCACTTTTAT CAGTATTTCGACTTAGATCTCGTACCCAAAAGGTTTGCTCTCTCTTCTCT TTCTTCCTCTCGTTGCTCTCGCCGCCAGTTCTTCGACTCGAAGTTCGTCA CCCGCAGCGAGGGCCGCGAGGTGACGCGCGTCCGGCGGCAGGGCCGCGTG CAGGTCTCCCTCGACGTCGCGACGCGCGGCATGGCCGCTTTCGGCTACGA CGCTGGAGGCTGGAGCGGCGGTGCTGGCGCTAGCGCCATCGCTCAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig776:7071..8217-

>mRNA_P-wetherbeei_contig776.6.3 ID=mRNA_P-wetherbeei_contig776.6.3|Name=mRNA_P-wetherbeei_contig776.6.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig776:7071..8217- (Phaeothamnion wetherbeei SAG_119_79)
GCACAGTTTCCCGGCTGGGACAACCTCTACTGCCGGTACGCGTTCAGCTT
CGGGAGCGATTGGTCCATGGTCCACGGCATGGATACGGGCCTCTCGCAAC
TTGCGAGAAAAGGGAATGGCAGCGAGCAGTGCGTGGTGTGGAACTTTCCC
ATAGAGATTAGCTTCAAGTCGACAAACGCCTTCGGCTGGCCACGGATAGC
GATAAGCGTGAGTGGAAGAAAGCCCGAGCGCCCGCAGTCTCGATCGCCGG
CGATATTTTTTGACTGCCTGCCGCTGTATTTCCCGTTGCTCGTGACGCAG
CCATTAGGTGAAGGCATAGGCTTTTTGCTTCCTCAGCTGACCCCCGACGA
TGTCCTACTGCATATTCCAAGAGGGTTCTCGTGCACTTGCCAATCCTTCC
TGGTCCGGGGGGCGGATGGGGGGGGGCTTTCTCCGACCCGAAACTCACAA
CCCATCTCTTCCCCTTCCCTCTTCACGGTTCTGTTCCTCCCCACTTGCTG
CCGTGGTCATTCCACCCTGCACCAGGTCTGCGCCCTGGACAGCCTGGGAC
GGGATGTGGTGGTCGGCTACGGGGCGCTGCTGGTGCCGACGGCGCCCGGC
CGCTACCGCCGCGCCGTCCACTTGTACGCTCCGCTGGCGTCGTCGTGGAT
GCAGCGGCTCTGGTCGTGGGCCGCCGGATCCTACCCGGAGTTCTTCGACT
CGAAGTTCGTCACCCGCAGCGAGGGCCGCGAGGTGACGCGCGTCCGGCGG
CAGGGCCGCGTGCAGGTCTCCCTCGACGTCGCGACGCGCGGCATGGCCGC
TTTCGGCTACGACGCTGGAGGCTGGAGCGGCGGTGCTGGCGCTAGCGCCA
TCGCTCAG
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