mRNA_P-wetherbeei_contig7745.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: A0A6H5JI62_9PHAE (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI62_9PHAE) HSP 1 Score: 207 bits (528), Expect = 6.270e-63 Identity = 120/235 (51.06%), Postives = 148/235 (62.98%), Query Frame = 1
Query: 4 RRGMRTLLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHKERWRCDAFVLDATADHAVMPAAIAAGGGVDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVSD------------------------------------AGLAEVECEYLRRQYANRSERKARRRVFVHAKFQKP 591
R G RTLLELGCGVGNAVFPLLE NRGLFV+A DLS I +L++ P + RC+A VLDATAD +P + GGVD+VLLQFSLSAV+P+ MA VAR AL+PGG ++RDYGR DEAQLRF +G R+ DNFY DGT +++FS+ DLR+LF A L E E ++RRQYANR+++ ARRRV+VH KF+KP
Sbjct: 119 RLGRRTLLELGCGVGNAVFPLLEENRGLFVIAADLSPRGIGVLKQHPKY--SCGRCEALVLDATADD--LPPGVLEDGGVDLVLLQFSLSAVAPKDMATVARLVETALKPGGKLLVRDYGRHDEAQLRFAKGRRLGDNFYVRQDGTTSYFFSLEDLRQLFCGSSPGGSGLRDSSXXXXXXXXXXXTCSGQSNRGWFDGGASLVEEELSFVRRQYANRAQKVARRRVWVHGKFRKP 349
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: I2CR87_NANGC (Methyltransferase like 8 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR87_NANGC) HSP 1 Score: 184 bits (468), Expect = 4.270e-54 Identity = 99/198 (50.00%), Postives = 133/198 (67.17%), Query Frame = 1
Query: 16 RTLLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHKERWRCDAFVLDATADHAVMPAAIAAGGGVDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVS-DAGLAEVECEYLRRQYANRSERKARRRVFVHAKFQKPFE 597
R L+ELGCGVGNAVFPLL + LF+ A D S A+ +L+ P + R RC A+V D ++ P GG D+ L ++LSA++P+K+ VA AL+PGG ++RDYGR+DEAQLRF RGHR+ +NFY DGTRA+YFSV DLR++F + G E+E Y+RRQY NR++ RRRV+VHA+F+K E
Sbjct: 146 RVLIELGCGVGNAVFPLLARDPNLFIYAFDFSPRAVAILKNHPVYKNSR-RCFAWVQDVVDTPSLPPFLTRNGGQADLCLCMYALSAMAPDKIHLVAHKIWAALKPGGRVLIRDYGRWDEAQLRFKRGHRLGENFYLRSDGTRAYYFSVEDLRKMFCGKEGGFREIEAGYVRRQYINRADAATRRRVWVHARFEKVCE 342
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: A0A835Z8H9_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H9_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.110e-53 Identity = 113/208 (54.33%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 4 RRGMRTLLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLR--------ESPAFHKE-RWRCDAFVLDATADHAVMPAAIAAGGGVDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVSDAGLAEVECEYLRRQYANRSERKARRRVFVHAKFQKP 591
RRG R LLELGCGVGNAVFPLL+ NRGL+V A DL+ AI LLR + A + RC A V DA A A +P A+ A GGVDMV+L F+LSAV+PEK A+V AA ALRPGGV + RDYGR+DEAQLR R+ DNFY DGTRA+YF + D+ L + AGL +E E +RR+ ANR RV+VHAK ++P
Sbjct: 55 RRGRRALLELGCGVGNAVFPLLQQNRGLYVYALDLAPSAIALLRGRRDGGGGDGAAGGGDFAERCYAEVHDAAAADA-LPCAVTAEGGVDMVMLMFALSAVAPEKHARVMAKAAAALRPGGVVLFRDYGRYDEAQLRLPAHARIADNFYARADGTRAYYFDLPDVAALAAA-AGLEVLELEAVRRRCANRKTSAVFNRVWVHAKLRRP 260
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: A0A4D9D926_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D926_9STRA) HSP 1 Score: 182 bits (462), Expect = 5.290e-52 Identity = 101/199 (50.75%), Postives = 134/199 (67.34%), Query Frame = 1
Query: 16 RTLLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHKERWRCDAFVLDATADHAVMPAAIAAGGG-VDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVS-DAGLAEVECEYLRRQYANRSERKARRRVFVHAKFQKPFE 597
R L+ELGCGVGNAVFPLL + LF+ A D S A+ +L+ P F+K RC A+V D D +P + GG D+ L ++LSA++P+K+ VA AL+PGG ++RDYGR+DEAQLRF RGHR+ +NFY DGTRA+YFSV DLR +F + G E+E Y+RRQY NR++ RRRV+VHA+F+K E
Sbjct: 263 RVLIELGCGVGNAVFPLLARDPNLFIYAFDFSPRAVAILKNHP-FYKNSRRCFAWVQDVV-DTPSLPTFLTQNGGQADLCLCMYALSAMAPDKIRLVAHKIWAALKPGGRVLIRDYGRWDEAQLRFKRGHRLGENFYLRSDGTRAYYFSVEDLREMFCGKEGGFREIEAGYVRRQYINRADAATRRRVWVHARFEKVCE 459
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: A0A024U4J4_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4J4_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.930e-50 Identity = 99/193 (51.30%), Postives = 125/193 (64.77%), Query Frame = 1
Query: 22 LLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHKERWRCDAFVLDATADHAVMPAAIAAGGGVDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVSDAGLAEVECEYLRRQYANRSERKARRRVFVHAKFQKP 591
LLE+GCGVGNA PLLE N L VVA D + A+ L + P + R C V D T D +PA I A GGV L F LSA+ P+KM + A A++PGG RDYGR+D+AQLRF GH++ DNFY D TRA+YF++ ++R LFV+ AGL E E EY+RRQY+NRS+ R RV+VHA F+KP
Sbjct: 107 LLEVGCGVGNAALPLLEVNPRLHVVAIDFAAKAVELFHQQPLYDPSR--CHVSVCDITTDP--LPAVIDAEGGVHFALFMFCLSALHPDKMQAAVQKIADAVKPGGKIFFRDYGRYDQAQLRFKPGHKLADNFYVRQDNTRAYYFTIDEVRDLFVA-AGLVERENEYIRRQYSNRSQGVVRFRVWVHAIFEKP 294
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: A0A7S2MQY1_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQY1_9STRA) HSP 1 Score: 174 bits (441), Expect = 3.550e-50 Identity = 96/197 (48.73%), Postives = 133/197 (67.51%), Query Frame = 1
Query: 13 MRTLLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHK--ERWRCDAFVLDATADHAVMPAAIAAGGGVDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVSDAGLAEVECEYLRRQYANRSERKARRRVFVHAKFQK 588
+R LE+GCGVGNA+FPLLE+ L +A D S AI++L+ + E+ RC A V D T D +P GGG+D+V+L F LSA+SPE M + + AL+PGGV + RDYGRFDEAQLRFG+G ++ DNFY DGTR FYF+ ++ L + GL +E +++RRQYANR+++ AR+RV++H +FQK
Sbjct: 134 IRRFLEVGCGVGNALFPLLESQPHLNGIAVDFSSEAIQVLKTHKNYLSLNEQGRCVAHVCDITKDE--LPPEAYIGGGLDVVILLFCLSAISPENMRRSVERLSGALKPGGVLLFRDYGRFDEAQLRFGKGRKLGDNFYVKQDGTRVFYFTCDEVSNLMTT-VGLETLEVDFIRRQYANRAQQVARQRVWIHGRFQK 327
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: A0A6G0XWX7_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWX7_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.380e-49 Identity = 95/193 (49.22%), Postives = 128/193 (66.32%), Query Frame = 1
Query: 22 LLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHKERWRCDAFVLDATADHAVMPAAIAAGGGVDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVSDAGLAEVECEYLRRQYANRSERKARRRVFVHAKFQKP 591
LLE+GCGVGNA PLLE N L VVA D + A+ L + P + R C+A V D TAD +P+ I GGV+ L F LSA+ P+KM + A++PGG RDYGR+D+AQLRF GH++ +NFY D TRA+YF++ ++R++FV+ AG+ E E EY+RRQYANRS+ R RV++HA F+KP
Sbjct: 102 LLEVGCGVGNAALPLLEVNPRLHVVAIDFANSAVELFHKQPLYDPSR--CNASVCDITADP--LPSIIDEAGGVNYALFMFCLSALHPDKMQDAVQKIVNAVKPGGKIFFRDYGRYDQAQLRFKPGHKLAENFYVRQDNTRAYYFTIEEIRQMFVT-AGMIERENEYIRRQYANRSQGVVRFRVWIHAIFEKP 289
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: A0A1V9ZGM9_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGM9_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.540e-49 Identity = 98/193 (50.78%), Postives = 123/193 (63.73%), Query Frame = 1
Query: 22 LLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHKERWRCDAFVLDATADHAVMPAAIAAGGGVDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVSDAGLAEVECEYLRRQYANRSERKARRRVFVHAKFQKP 591
LLE+GCGVGNA PLLE N L VVA D + A+ L +E P F R C V D T D +P+ I GGV+ L F LSA+ P+KM A A+RPGG RDYGR+D+AQLRF GH++ DNFY D TRA+YF+ +++ LF + AGL E E EY+RRQYANRS+ R RV++HA F+KP
Sbjct: 105 LLEVGCGVGNAALPLLEINPRLNVVAIDFAPKAVDLFKEQPLFDPAR--CHVSVCDITKD--ALPSVIDEAGGVNFALFMFCLSALRPDKMRDAVAKIASAVRPGGKIFFRDYGRYDQAQLRFKPGHKLADNFYVRQDNTRAYYFTTDEVKELFEA-AGLVERENEYIRRQYANRSQNVVRFRVWIHAVFEKP 292
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: A0A485LAU0_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAU0_9STRA) HSP 1 Score: 170 bits (431), Expect = 4.340e-49 Identity = 99/193 (51.30%), Postives = 122/193 (63.21%), Query Frame = 1
Query: 22 LLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHKERWRCDAFVLDATADHAVMPAAIAAGGGVDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVSDAGLAEVECEYLRRQYANRSERKARRRVFVHAKFQKP 591
LLE+GCGVGNA PLLE N L VVA D + A+ L P F + RC V D T D +PA I GGV+ L F LSA+ PEKM + A +++PGG RDYGRFD+AQLRF GH++ DNFY D TRA+YF+ ++R LF AG+ E E EY+RRQYANRS+ R RV++HA FQKP
Sbjct: 105 LLEVGCGVGNAALPLLEINPRLKVVAIDFADKAVELFHHQPLF--DPTRCHVSVCDITKDP--LPAVIDQEGGVNYALFMFCLSALHPEKMQDAVQKIADSVKPGGKIFFRDYGRFDQAQLRFKPGHKLADNFYVRQDNTRAYYFTTDEVRDLFAK-AGMVECENEYIRRQYANRSQGVVRFRVWIHAVFQKP 292
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Match: A0A2D4C7Y2_PYTIN (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7Y2_PYTIN) HSP 1 Score: 170 bits (431), Expect = 5.380e-49 Identity = 97/195 (49.74%), Postives = 121/195 (62.05%), Query Frame = 1
Query: 16 RTLLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHKERWRCDAFVLDATADHAVMPAAIAAGGGVDMVLLQFSLSAVSPEKMAKVARFAAVALRPGGVAMLRDYGRFDEAQLRFGRGHRVDDNFY---DGTRAFYFSVADLRRLFVSDAGLAEVECEYLRRQYANRSERKARRRVFVHAKFQKP 591
+ LLE+GCGVGNA PLLE N L VVA D + AI LL+ P + + R A V D T D +PA A GGVD L F LSA+ PEKM A++PGG RDYGR+D+AQLRF GH++ DNFY D TRA+Y ++ ++ R+ + AGL VE EY+RRQY NR + R RV+VHA FQKP
Sbjct: 108 KVLLEVGCGVGNAALPLLEVNPSLHVVAIDFADSAINLLKTQPLY--DPTRVHASVCDITNDE--LPAXAHADGGVDFALFLFCLSAIHPEKMQAAVNKVVAAIKPGGKLFFRDYGRYDQAQLRFKPGHKLQDNFYVRQDNTRAYYXTIEEVERMMEA-AGLVRVENEYIRRQYVNRQQNVVRFRVWVHAVFQKP 297 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7745.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7745.1.2 >prot_P-wetherbeei_contig7745.1.2 ID=prot_P-wetherbeei_contig7745.1.2|Name=mRNA_P-wetherbeei_contig7745.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp MRTLLELGCGVGNAVFPLLEANRGLFVVACDLSVHAIRLLRESPAFHKERback to top mRNA from alignment at P-wetherbeei_contig7745:610..2007+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7745.1.2 ID=mRNA_P-wetherbeei_contig7745.1.2|Name=mRNA_P-wetherbeei_contig7745.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1398bp|location=Sequence derived from alignment at P-wetherbeei_contig7745:610..2007+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7745:610..2007+ >mRNA_P-wetherbeei_contig7745.1.2 ID=mRNA_P-wetherbeei_contig7745.1.2|Name=mRNA_P-wetherbeei_contig7745.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig7745:610..2007+ (Phaeothamnion wetherbeei SAG_119_79)back to top |