mRNA_P-wetherbeei_contig7740.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: A0A3A4RD72_9BURK (Helix-hairpin-helix domain-containing protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A3A4RD72_9BURK) HSP 1 Score: 181 bits (458), Expect = 2.810e-57 Identity = 99/104 (95.19%), Postives = 100/104 (96.15%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKPAAAAPADKKPAAAAK 312
MFKKIL SLLSLLAAASFAAVDINTA VADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRA KLSSEGLTVNGEAFKPAAAAPA+KKPAA AK
Sbjct: 1 MFKKILLSLLSLLAAASFAAVDINTATVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAVKLSSEGLTVNGEAFKPAAAAPAEKKPAATAK 104
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: A0A6P1J8R8_9BURK (Helix-hairpin-helix domain-containing protein n=1 Tax=Hydrogenophaga sp. BPS33 TaxID=2651974 RepID=A0A6P1J8R8_9BURK) HSP 1 Score: 159 bits (403), Expect = 6.050e-49 Identity = 84/98 (85.71%), Postives = 89/98 (90.82%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKPAAAAPADKK 294
MFKK L LLSL AAASFAAVDINTA V+DLDSIKGIGPGTS KILEARK++PFKNWGDLIQRVPGIGDKRA KLS+EGLTVNGEAFKP AA P+DKK
Sbjct: 1 MFKKTLVCLLSLFAAASFAAVDINTATVSDLDSIKGIGPGTSTKILEARKSAPFKNWGDLIQRVPGIGDKRAVKLSAEGLTVNGEAFKPTAATPSDKK 98
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: A0A0T2ZBD1_9BURK (Uncharacterized protein n=2 Tax=Hydrogenophaga sp. Root209 TaxID=1736490 RepID=A0A0T2ZBD1_9BURK) HSP 1 Score: 144 bits (364), Expect = 7.010e-43 Identity = 85/109 (77.98%), Postives = 88/109 (80.73%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKP-----AAAAPADKKPAAAAK 312
MFKK L S L+LLAAASFAAVDIN A ADLDSIKGIGP TS KIL+ RK SPFK+WGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFK A ADKK AAAAK
Sbjct: 1 MFKKFLASSLALLAAASFAAVDINKATPADLDSIKGIGPSTSTKILDERKTSPFKDWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKAVDKPVAEKKAADKKAAAAAK 109
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: UPI0010F63BF3 (helix-hairpin-helix domain-containing protein n=1 Tax=Hydrogenophaga sp. 2FB TaxID=2502187 RepID=UPI0010F63BF3) HSP 1 Score: 143 bits (361), Expect = 2.010e-42 Identity = 79/98 (80.61%), Postives = 82/98 (83.67%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKPAAAAPADKK 294
MFKK + LLSL AAASFAAVDINTA VADLDSIKGIGPGTSAKILE RKASPFKNW DLIQRVPGIG KRA KLSSEGLTVNG+ FK A+KK
Sbjct: 1 MFKKSIACLLSLFAAASFAAVDINTATVADLDSIKGIGPGTSAKILEERKASPFKNWDDLIQRVPGIGGKRAVKLSSEGLTVNGDTFKAGMKPVAEKK 98
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: A0A6P1IHT1_9BURK (Helix-hairpin-helix domain-containing protein n=1 Tax=Hydrogenophaga sp. PBL-H3 TaxID=434010 RepID=A0A6P1IHT1_9BURK) HSP 1 Score: 140 bits (352), Expect = 5.490e-41 Identity = 79/114 (69.30%), Postives = 87/114 (76.32%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKPA----------AAAPADKKPAAAAK 312
MFKK L +L+LLAAASFAAVDIN A ADLDSIKGIGP TS KIL+ RKASPFK+W D +QRVPGIGDKRAAKLS+EGLTVNG+AFKP A PA+K PA A K
Sbjct: 1 MFKKFLAGMLALLAAASFAAVDINKATQADLDSIKGIGPSTSTKILDERKASPFKDWADFVQRVPGIGDKRAAKLSAEGLTVNGDAFKPTVKPAPEKKATAKKPAEKAPAPAVK 114
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: A0A1B3M1Q9_9BURK (Helix-hairpin-helix motif family protein n=1 Tax=Hydrogenophaga sp. RAC07 TaxID=1842537 RepID=A0A1B3M1Q9_9BURK) HSP 1 Score: 139 bits (351), Expect = 7.800e-41 Identity = 75/98 (76.53%), Postives = 83/98 (84.69%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKPAAAAPADKK 294
MFKKIL S L+L AA SFAAVDIN A VADLDSIKGIGP TSAK+L+ RK SPFK+W DLIQRVPGIGDKRAAKLS++GLTVNG+AFKP A+KK
Sbjct: 1 MFKKILASSLALFAAISFAAVDINKATVADLDSIKGIGPATSAKMLDERKTSPFKDWADLIQRVPGIGDKRAAKLSNQGLTVNGDAFKPTDKPAAEKK 98
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: A0A2W4VNA5_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A2W4VNA5_9BURK) HSP 1 Score: 139 bits (350), Expect = 9.230e-41 Identity = 73/98 (74.49%), Postives = 84/98 (85.71%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKPAAAAPADKK 294
MFKK+ SLL+LL AASFAAVDIN A VADLDSIKGIGP TSAK+L+ RK +PFK+W DLIQRVPGIGDKRAAKLS++GLTVNG+AFK + A P + K
Sbjct: 1 MFKKVFASLLALLTAASFAAVDINKATVADLDSIKGIGPSTSAKMLDQRKTAPFKDWADLIQRVPGIGDKRAAKLSAQGLTVNGDAFKHSDAKPVESK 98
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: UPI001F388DD2 (helix-hairpin-helix domain-containing protein n=1 Tax=Hydrogenophaga sp. SL48 TaxID=2806347 RepID=UPI001F388DD2) HSP 1 Score: 137 bits (346), Expect = 1.420e-39 Identity = 76/108 (70.37%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKPA----AAAPADK--KPAAA 306
M KK+L++LL++ AA +FAAVD+NTA+ ADLDS+KGIGPGTS+K+LE RKA FK+W DLI+R+PGIG+KRAAKLSSEGLTVNGEAFKP AAAP +K KPAAA
Sbjct: 40 MIKKLLSALLAVFAAGAFAAVDVNTASPADLDSVKGIGPGTSSKLLEVRKAGKFKDWSDLIERMPGIGEKRAAKLSSEGLTVNGEAFKPVVSTKAAAPMEKSLKPAAA 147
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: UPI001BC024A1 (Helix-hairpin-helix domain-containing protein n=1 Tax=Hydrogenophaga sp. TaxID=1904254 RepID=UPI001BC024A1) HSP 1 Score: 134 bits (338), Expect = 8.150e-39 Identity = 74/102 (72.55%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKPAAAAPADKKPAAA 306
M KK L +LL+L AAA+FAAVD+N A+VADLDSIKGIGPGTSAKI+E RKA+ FK+W DL+QRV GIGDKRAAKLS+EGLTVNG AFK A A KPA+A
Sbjct: 1 MIKKTLATLLALFAAAAFAAVDVNDASVADLDSIKGIGPGTSAKIMEQRKAAKFKDWDDLVQRVSGIGDKRAAKLSAEGLTVNGAAFKAGAVVKALAKPASA 102
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Match: A0A1L1PD60_HYDIT (Uncharacterized protein n=2 Tax=Hydrogenophaga TaxID=47420 RepID=A0A1L1PD60_HYDIT) HSP 1 Score: 131 bits (330), Expect = 8.070e-38 Identity = 69/99 (69.70%), Postives = 83/99 (83.84%), Query Frame = 1
Query: 1 MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKASPFKNWGDLIQRVPGIGDKRAAKLSSEGLTVNGEAFKPAAAAPADKKP 297
M K ++ +L SL AA FAAVD+N A+ ADLDS++GIGP T++KILE RKA+PFK+WGDLI+RVPGIGDKRAAKLS EGLTVNG+AFKP A PA+ KP
Sbjct: 1 MKKLLIAALFSLCAATGFAAVDVNKASEADLDSVRGIGPSTTSKILEQRKAAPFKSWGDLIERVPGIGDKRAAKLSQEGLTVNGDAFKPTGA-PAEAKP 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7740.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7740.2.1 >prot_P-wetherbeei_contig7740.2.1 ID=prot_P-wetherbeei_contig7740.2.1|Name=mRNA_P-wetherbeei_contig7740.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp MFKKILTSLLSLLAAASFAAVDINTAAVADLDSIKGIGPGTSAKILEARKback to top mRNA from alignment at P-wetherbeei_contig7740:1394..1708- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7740.2.1 ID=mRNA_P-wetherbeei_contig7740.2.1|Name=mRNA_P-wetherbeei_contig7740.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig7740:1394..1708- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7740:1394..1708- >mRNA_P-wetherbeei_contig7740.2.1 ID=mRNA_P-wetherbeei_contig7740.2.1|Name=mRNA_P-wetherbeei_contig7740.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig7740:1394..1708- (Phaeothamnion wetherbeei SAG_119_79)back to top |