mRNA_P-wetherbeei_contig7717.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7717.1.1
Unique NamemRNA_P-wetherbeei_contig7717.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: D7G6Y4_ECTSI (Not3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y4_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 2.250e-88
Identity = 158/268 (58.96%), Postives = 198/268 (73.88%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMDARKRIEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLT---GGKKKKSDVARVEVLENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKF-GEDTYDHFYEDLSLDEFPV-GGPGVLLGKGRRLPTMNEEDEE 789
            MG NRK+Q EIDRT+KKVDEGVALFDEI++KV SATQ NQKEKYE DLKKEIKKLQR RD+IK W+ S++IKDK  L++ R+RIE+KMEQFKVCEKETKTK FSKEGLA+  E DP+E E+   R WL E +  L  QL+GFEADVE+     G KKK  D  R+  L+N   QH +HIG+LEQ++RLLDN DL+P +V++I E++++Y+SQ   G+D+  I+KF  ED+YD  YE L LDE    G P V+ G  ++L    E DEE
Sbjct:    4 MGVNRKLQTEIDRTLKKVDEGVALFDEIWDKVYSATQQNQKEKYEGDLKKEIKKLQRHRDSIKGWLQSNDIKDKTILLEVRRRIESKMEQFKVCEKETKTKKFSKEGLAREAEMDPEEKEKMEKRDWLTEKIQMLNTQLEGFEADVEKAMAALGKKKKAKDDERINALDNARKQHNYHIGRLEQMLRLLDNNDLAPDQVDSIIEDLDWYISQA--GDDIHLIEKFEAEDSYD-LYEALELDELAAPGAPPVVKGS-KKLDVYAEGDEE 267
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BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: A0A835ZCQ6_9STRA (Putative subunit of the CCR4NOT complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCQ6_9STRA)

HSP 1 Score: 279 bits (713), Expect = 2.160e-86
Identity = 159/266 (59.77%), Postives = 197/266 (74.06%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMDARKRIEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLTGGKKKK--SDVARVEVLENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKFGEDTYDHFYEDLSLDEF-PVGGPGVLLGK-GRRLPTMNEEDE 786
            MG NRK+Q EIDRT+KKVDEGVA FD+I+EKV SA Q NQKEKYE DLKKEIKKLQR RD+IK+WIAS++IKDK  LMDARK IE KMEQFK+CEKETKTKAFSKEGLA+A   DP+E  R+  R +LQ  +D L EQ++ FEAD+E+L  G KKK  +++ R+ +L+NGI QHR+HIG+LEQIMRLLDN DL   +V  I+++++YYV    +   +ES    GED YD FYE L LD   P   P +++ K GR      +EDE
Sbjct:    1 MGTNRKLQTEIDRTLKKVDEGVAEFDQIWEKVYSAQQQNQKEKYEGDLKKEIKKLQRHRDSIKTWIASNDIKDKRQLMDARKLIETKMEQFKICEKETKTKAFSKEGLARAAMTDPEEAARQDKRDYLQGKIDDLTEQIESFEADLEKLNSGNKKKKSTELERIRILDNGIMQHRYHIGRLEQIMRLLDNGDLGTEQVEQIKDDLDYYVETSVDPEAIES----GEDAYD-FYEVLDLDALGPAAMPKIVVPKTGRAGEEDGDEDE 261
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BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: A0A6H5L3Q5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q5_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 5.240e-85
Identity = 158/268 (58.96%), Postives = 198/268 (73.88%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMDARKRIEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLT---GGKKKKSDVARVEVLENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKF-GEDTYDHFYEDLSLDEFPV-GGPGVLLGKGRRLPTMNEEDEE 789
            MG NRK+Q EIDRT+KKVDEGVALFDEI++KV SATQ NQKEKYE DLKKEIKKLQR RD+IK W+ S++IKDK  L++ R+RIE+KMEQFKVCEKETKTK FSKEGLA+  E DP+E E+   R WL E +  L  QL+GFEADVE+     G KKK  D  R+  L+N   QH +HIG+LEQ++RLLDN DL+P +V++I E++++Y+SQ   G+D+  I+KF  ED+YD  YE L LDE    G P V+ G  ++L    E DEE
Sbjct:    4 MGVNRKLQTEIDRTLKKVDEGVALFDEIWDKVYSATQQNQKEKYEGDLKKEIKKLQRHRDSIKGWLQSNDIKDKTILLEVRRRIESKMEQFKVCEKETKTKKFSKEGLAREAEMDPEEKEKMEKRDWLTEKIQMLNTQLEGFEADVEKAMAALGKKKKAKDDERINALDNARKQHNYHIGRLEQMLRLLDNNDLAPDQVDSIIEDLDWYISQA--GDDIHLIEKFEAEDSYD-LYEALELDELAAPGAPPVVKGN-KKLDVFAEGDEE 267
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BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: A0A7S4DLK6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DLK6_HETAK)

HSP 1 Score: 243 bits (619), Expect = 1.010e-75
Identity = 137/241 (56.85%), Postives = 174/241 (72.20%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMDARKRIEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLTGGKKKKSDVARVEVLENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKFGEDTYDHFYEDLSLDEFPV 723
            M ANRK+Q EIDR MKK++EGV LFDEI++KV SATQ NQKEKYE DLKKEIKKLQR RD IK+WIAS++IKDK AL+DARK IE KMEQFKVCEKETKTK +SKEGL +  + DP E ER     W+Q+ +DKLQ+QL+  EAD+++L  GK KK +  R+  LE  +  HR HI KLEQI RL+DNE L  ++V  +++ +EYYV    E  D + +  + E  Y   YE L+L++  +
Sbjct:    1 MSANRKLQTEIDRCMKKIEEGVELFDEIWDKVYSATQQNQKEKYEVDLKKEIKKLQRLRDQIKTWIASNDIKDKSALVDARKLIETKMEQFKVCEKETKTKTYSKEGLLREAKLDPKEKERRDCMNWVQDKVDKLQQQLELMEADLDQLNSGKGKKQNKTRIGALEGHMGHHRAHILKLEQIARLVDNEALEAAQVEEVKDEVEYYVE---ENQDPDFMAGYDEAQYP--YEALALEDAAI 236
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BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: A0A7R9UGW9_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UGW9_DIALT)

HSP 1 Score: 239 bits (609), Expect = 7.110e-74
Identity = 137/242 (56.61%), Postives = 173/242 (71.49%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMDARKRIEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLTGGKKKKSDVA-RVEV-LENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKFGEDTYDHFYEDLSLDEFP 720
            MG  RK+Q+EIDRT+KKV EGV LFDEI+ KV SAT  NQKEKYE DLKKEIKKLQR RD IK+WIA S+IKDK  LMDARK IE++ME+FKVCEKE KTKAFSKEGL +A ++DP EVER  +R WL   L  L +Q+D  EA++E +   K KKS    + E  LE+ + +HR H  ++EQI+R++DNE L+P +VNAIQE +EYY+    E +       F ED  +  Y++L LD+ P
Sbjct:   13 MGTTRKLQSEIDRTLKKVQEGVELFDEIWNKVYSATNANQKEKYEGDLKKEIKKLQRYRDDIKTWIAKSDIKDKRPLMDARKAIESEMERFKVCEKEFKTKAFSKEGLGQARKEDPKEVERNKTRKWLAAALSTLVDQIDALEAEIEVIAANKGKKSAKGGKTETELESWVEKHRLHERRMEQILRMIDNETLAPEQVNAIQEQLEYYLESNQEPD-------FNED--EGLYDELGLDDLP 245
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BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: F0YJK4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJK4_AURAN)

HSP 1 Score: 243 bits (619), Expect = 4.580e-72
Identity = 138/242 (57.02%), Postives = 176/242 (72.73%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMDARKR-IEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLTGGKKKKSDVARVEVLENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKFGEDTYDHFYEDLSLDEFPV 723
            M ANRK+Q EIDRT+KKV+EGV +FDEI++KV SATQ NQKEKYE DLKKEIKKLQR RD IK+W+ASS+IKDK  L DAR+  IE KMEQFKVCEKETKTK +SKEGLA+  + DP E  + S+R WL E +D+L  Q+D  EAD+E+LT GK  K +   +E LE  I +HR+HI +LEQI RLLDN+ L   ++N I+E++EYY+    E + +++ D+    T D F E L L + P 
Sbjct:    1 MSANRKLQTEIDRTLKKVEEGVEIFDEIWDKVYSATQQNQKEKYEVDLKKEIKKLQRHRDQIKTWVASSDIKDKRPLTDARRGLIETKMEQFKVCEKETKTKTYSKEGLARETKIDPHEAAKNSTRDWLSEKVDQLSLQIDMHEADMEKLTSGKGSKRNKQEIEQLEASIKRHRWHIARLEQITRLLDNDALQHEQINEIKEDVEYYIDANQEPDFMDAYDE----TMDIF-ESLDLGDLPT 237
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BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: A0A7S2AHM1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AHM1_9STRA)

HSP 1 Score: 228 bits (582), Expect = 4.890e-70
Identity = 133/257 (51.75%), Postives = 175/257 (68.09%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMDARKRIEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLTGGKKKKSDVARVEVLENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKFGEDTYDHFYEDLSLDEFPVGGPGVLLGKGRRLPTM 771
            M   RK+Q EIDRT+KKV+EGV LFDE +EKV SATQ NQKEKYE DLKKEIKKLQR RD IK+WI+S++ KDK  LMDARK IE KMEQFKVCEKETKTK +SKEGLA+    DP E +++   ++LQ+ + +L+ Q++  EADVE+L+ GK K  + A +E  +  I +HR+HI K+EQI+R+LDN+ L    +  ++E+IEYY+    +   + S +          YE L L+E P   P V L     LPT+
Sbjct:    1 MSGARKLQTEIDRTLKKVEEGVELFDETWEKVYSATQQNQKEKYEVDLKKEIKKLQRLRDQIKTWISSNDTKDKRQLMDARKLIETKMEQFKVCEKETKTKTYSKEGLAREARLDPAEQQKQDCHSYLQDCIARLEVQIEATEADVEKLSSGKGKNKNKAELEEKDTTIRKHRWHISKMEQIIRMLDNDVLEVERIEEVKEDIEYYIDSNQDPEFMASYEDMDP------YEVLELEEIPA--PVVEL-----LPTV 244
[Close]
BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: F0YIP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIP0_AURAN)

HSP 1 Score: 243 bits (619), Expect = 6.210e-70
Identity = 139/245 (56.73%), Postives = 176/245 (71.84%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMD----ARKRIEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLTGGKKKKSDVARVEVLENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKFGEDTYDHFYEDLSLDEFPV 723
            M ANRK+Q EIDRT+KKV+EGV +FDEI++KV SATQ NQKEKYE DLKKEIKKLQR RD IK+W+ASS+IKDK  L D    ARK IE KMEQFKVCEKETKTK +SKEGLA+  + DP E  + S+R WL E +D+L  Q+D  EAD+E+LT GK  K +   +E LE  I +HR+HI +LEQI RLLDN+ L   ++N I+E++EYY+    E + +++ D+    T D F E L L + P 
Sbjct:    1 MSANRKLQTEIDRTLKKVEEGVEIFDEIWDKVYSATQQNQKEKYEVDLKKEIKKLQRHRDQIKTWVASSDIKDKRPLTDVHHSARKLIETKMEQFKVCEKETKTKTYSKEGLARETKIDPHEAAKNSTRDWLSEKVDQLSLQIDMHEADMEKLTSGKGSKRNKQEIEQLEASIKRHRWHIARLEQITRLLDNDALQHEQINEIKEDVEYYIDANQEPDFMDAYDE----TMDIF-ESLDLGDLPT 240
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BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: A0A8J5XJD6_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJD6_DIALT)

HSP 1 Score: 239 bits (609), Expect = 6.600e-69
Identity = 137/242 (56.61%), Postives = 173/242 (71.49%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMDARKRIEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLTGGKKKKSDVA-RVEV-LENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKFGEDTYDHFYEDLSLDEFP 720
            MG  RK+Q+EIDRT+KKV EGV LFDEI+ KV SAT  NQKEKYE DLKKEIKKLQR RD IK+WIA S+IKDK  LMDARK IE++ME+FKVCEKE KTKAFSKEGL +A ++DP EVER  +R WL   L  L +Q+D  EA++E +   K KKS    + E  LE+ + +HR H  ++EQI+R++DNE L+P +VNAIQE +EYY+    E +       F ED  +  Y++L LD+ P
Sbjct:    1 MGTTRKLQSEIDRTLKKVQEGVELFDEIWNKVYSATNANQKEKYEGDLKKEIKKLQRYRDDIKTWIAKSDIKDKRPLMDARKAIESEMERFKVCEKEFKTKAFSKEGLGQARKEDPKEVERNKTRKWLAAALSTLVDQIDALEAEIEVIAANKGKKSAKGGKTETELESWVEKHRLHERRMEQILRMIDNETLAPEQVNAIQEQLEYYLESNQEPD-------FNED--EGLYDELGLDDLP 233
[Close]
BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Match: A0A7S1UQS1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UQS1_9STRA)

HSP 1 Score: 234 bits (597), Expect = 2.470e-68
Identity = 131/241 (54.36%), Postives = 173/241 (71.78%), Query Frame = 1 
Query:    1 MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKKEIKKLQRSRDTIKSWIASSEIKDKVALMDARKRIEAKMEQFKVCEKETKTKAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLTGGKKKKSDVARVEVLENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQENIEYYVSQVSEGNDVESIDKFGEDTYDHFYEDLSLDEFPV 723
            M   RK+Q EIDR MKKVDEGV LFDEI+EKV +A   NQKEKYE DLKKEIKKLQR RD IK+WI+S+++KDK  L+ ARK IE+KMEQFK+CEKETKTKA+SKEGLAKA   DP E  + ++  W+ E +DKLQE  D  E ++ERL+ GK KK++  ++E   + IA H+FHI KLE IMRL++N+ L    V++I+E++EYY+    + +  ++ D+      + FYE L LD+  V
Sbjct:    1 MSGARKLQTEIDRVMKKVDEGVELFDEIWEKVYAADTQNQKEKYEMDLKKEIKKLQRLRDQIKTWISSNDVKDKDHLVHARKLIESKMEQFKICEKETKTKAYSKEGLAKAERLDPAEQAKRTTTKWIGEFVDKLQELADDKELEIERLSSGKGKKTNKHQIEECNHFIANHKFHINKLEGIMRLVNNDRLDVESVDSIREDLEYYIESYEDEDYQQAYDE------EFFYEPLGLDDMDV 235
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7717.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y4_ECTSI2.250e-8858.96Not3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835ZCQ6_9STRA2.160e-8659.77Putative subunit of the CCR4NOT complex n=1 Tax=Tr... [more]
A0A6H5L3Q5_9PHAE5.240e-8558.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DLK6_HETAK1.010e-7556.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9UGW9_DIALT7.110e-7456.61Hypothetical protein (Fragment) n=1 Tax=Diacronema... [more]
F0YJK4_AURAN4.580e-7257.02Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2AHM1_9STRA4.890e-7051.75Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YIP0_AURAN6.210e-7056.73Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J5XJD6_DIALT6.600e-6956.61Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S1UQS1_9STRA2.470e-6854.36Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7717contigP-wetherbeei_contig7717:189..2815 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G6Y4
Preferred nameCNOT3
PFAMsNOT2_3_5,Not3
Model size963
Max annot lvl2759|Eukaryota
KEGG koko:K12580
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000175,GO:0000278,GO:0000288,GO:0000289,GO:0000290,GO:0000932,GO:0000956,GO:0001701,GO:0001824,GO:0001825,GO:0001829,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004535,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006401,GO:0006402,GO:0006417,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010810,GO:0010811,GO:0010948,GO:0016070,GO:0016071,GO:0016567,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017148,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019538,GO:0022402,GO:0023051,GO:0023052,GO:0023057,GO:0030014,GO:0030015,GO:0030154,GO:0030155,GO:0030330,GO:0030447,GO:0031086,GO:0031087,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031570,GO:0031571,GO:0032268,GO:0032269,GO:0032446,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033554,GO:0034243,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035556,GO:0035770,GO:0036211,GO:0036464,GO:0040007,GO:0042710,GO:0042770,GO:0043009,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043900,GO:0043902,GO:0044010,GO:0044011,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045785,GO:0045786,GO:0045787,GO:0045893,GO:0045930,GO:0045935,GO:0045944,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0070647,GO:0071156,GO:0071158,GO:0071704,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0090068,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0090605,GO:0090609,GO:0097659,GO:0140098,GO:1900187,GO:1900189,GO:1900190,GO:1900192,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901575,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903508,GO:1990904,GO:2000036,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2001141
Exons5
Evalue3.68e-89
EggNOG OGsCOG5665@1|root,KOG2150@2759|Eukaryota
Ec32 ortholog descriptionCCR4-Not complex component, Not N-terminal domain
Ec32 orthologEc-01_011770.1
Descriptionnuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
Cds size963
COG categoryK
BRITEko00000,ko00001,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186996.761738-CDS-P-wetherbeei_contig7717:188..2131683186996.761738-CDS-P-wetherbeei_contig7717:188..213Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7717 189..213 +
1683186996.7754798-CDS-P-wetherbeei_contig7717:585..8361683186996.7754798-CDS-P-wetherbeei_contig7717:585..836Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7717 586..836 +
1683186996.7873995-CDS-P-wetherbeei_contig7717:1491..16291683186996.7873995-CDS-P-wetherbeei_contig7717:1491..1629Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7717 1492..1629 +
1683186996.7998502-CDS-P-wetherbeei_contig7717:2027..22491683186996.7998502-CDS-P-wetherbeei_contig7717:2027..2249Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7717 2028..2249 +
1683186996.8081207-CDS-P-wetherbeei_contig7717:2488..28151683186996.8081207-CDS-P-wetherbeei_contig7717:2488..2815Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7717 2489..2815 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7717.1.1prot_P-wetherbeei_contig7717.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7717 189..2815 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7717.1.1

>prot_P-wetherbeei_contig7717.1.1 ID=prot_P-wetherbeei_contig7717.1.1|Name=mRNA_P-wetherbeei_contig7717.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp
MGANRKVQAEIDRTMKKVDEGVALFDEIYEKVMSATQPNQKEKYESDLKK
EIKKLQRSRDTIKSWIASSEIKDKVALMDARKRIEAKMEQFKVCEKETKT
KAFSKEGLAKAVEKDPDEVERESSRAWLQEGLDKLQEQLDGFEADVERLT
GGKKKKSDVARVEVLENGIAQHRFHIGKLEQIMRLLDNEDLSPSEVNAIQ
ENIEYYVSQVSEGNDVESIDKFGEDTYDHFYEDLSLDEFPVGGPGVLLGK
GRRLPTMNEEDEEGDGDDESSKEAAPTPAAKENKGGKAAKRGAKAAAAAA
AAAAATVAAPAASAAPAAMGR
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mRNA from alignment at P-wetherbeei_contig7717:189..2815+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7717.1.1 ID=mRNA_P-wetherbeei_contig7717.1.1|Name=mRNA_P-wetherbeei_contig7717.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2627bp|location=Sequence derived from alignment at P-wetherbeei_contig7717:189..2815+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGCCAATAGAAAGGTTCAGGGTGAGTCCCCAGCGATCACACGTGA
CCTCTGTCCTCGTCTCTTTGCCCTCTTTTGCCCCTCTCTTTTGCCCCTCT
CTCATGCTGCGTCTTGAATGGTGCTATCTCATTTTGGCGGAGCACGTGGC
TGTGCGCATTCGTGTGATTTTCGCCAAGGATTGATTGATTTTTTGGGTCT
CCCTCAGGTGCAAGCTTGGAGAGGTTTGTCTTCTACATACATAGGATGAA
GCTTGGCCGCTTTAGATGCAATGTACGGCCTTGGAGTGGTCGATGGCAGG
CCTGCTATACTATCCACAACCTTCTCCGCGCTCTCCCACACGCAGACCTC
TTCCTGCCTGTCACCTCACATGACGCCCGCAAACCTCCAATCCACAGCCG
AAATTGACCGTACGATGAAGAAGGTGGACGAGGGCGTGGCCCTATTCGAC
GAGATCTACGAGAAGGTCATGTCGGCGACGCAGCCCAACCAAAAGGAGAA
GTACGAGTCCGACCTCAAGAAGGAGATCAAGAAGCTGCAGCGCAGCCGCG
ACACCATCAAATCGTGGATCGCGAGCAGCGAGATCAAGGACAAGGTCGCT
TTAATGGACGCCCGGAAGAGAATAGAGGCGAAAATGGAGCAGTTCAAGGT
ATGCATTGCCCCTCGGCGTCGACTGCCTGCCTTGCTCTTCCGCTGCATCG
GTCCGTTCCCTTCTCCTTTGTGGGCGTGTAAGAAGACAACAGTTATGTTG
ATGGGAGCTGTAGGTAGCATATGCTTCCTTGGCTTTTCTGTAACCTGGGA
CAGTTGGTCTTTTGCTTGCCGAATTTCATTGATTACATTGTTTGCGGCAA
TATAGCGCGAAAAGACTTCTTTGTTGCATTTTCGCAGCGCCGCATATGAC
GATTAAGGCAAGGCTAGAAGATAGCTTTCTTTACCTCAACAGCAAAGCTG
CTTTTCACCATGAGCTGTTCTGATTCTTGCCTACTCTTCCATGACTTCCG
CGTCGCAACGGGCATGCGTACACGGCGACAAAACTGCGGCTCCGTCTGCC
GGGTGCTTCTGGCTGCTGCTGGATGCCGGCTGCGGGCTGCTGCTGCTTCG
ACTGCTGGCTCGCTGGCCGCCGGATGCTGCTGTCTACTGTTGGCTGCTGC
TGGATGCTGCTGCTCCGACTGTCGGCTGCCGCTCGCTGTTGGGGGCTCCT
GGGCTGCGGGGCTCCGACTGCGGGCTGACGACTGCGGGCTGACGACTGGC
GGCTGTGGCTTGCTGGCTTGCTGGCTGACAACGGCTGCTGGGGAACTTGA
CAGGTGTGCGAGAAGGAGACCAAGACGAAGGCCTTTTCGAAGGAGGGGCT
GGCCAAGGCGGTGGAGAAGGACCCCGACGAGGTGGAGCGTGAGAGCAGCC
GCGCCTGGCTCCAGGAAGGCCTCGACAAACTCCAGGAGCAGGTAACGTCC
GTAGTTGTCTGTCTGTCGCTCTTCTTTCCCATCTGTGTATTGTCTGCGGG
CAGATGCGTTGGTGGTCTCAATTTTTCCTTTGTAGTCTGCTTATCTGTTT
ATCTGTTTTCTTGTACATGCCGTGGAGGTCGAAACCTGTGAGTGCAGTTG
GAACCTTTTTGTACCAACTTCGGTGACGAGGTCGGGCGTAAACGTTGTGA
TTTCCTTTTCTTTTGCCTTGTCTTGAAATACGGACTTTGTGTATCATGCG
TACATGTGACAAGGTGTCCCAACTCCTTGACAGCGGACCCCCCCCCGGCG
TTCCTCCTCACCTTCCCTTCCTCCCCTACCCCGCCTCTGCCTGGCCGGCC
CTGATCCGACTCGTTGTCCCCGGCTACCCCTCTCCCCAGCTGGACGGGTT
CGAGGCAGACGTGGAGCGGCTGACAGGCGGCAAGAAGAAAAAGTCGGATG
TGGCGCGCGTCGAGGTGCTCGAGAACGGCATCGCGCAGCACCGCTTCCAC
ATCGGCAAGCTCGAGCAGATCATGCGACTGCTCGATAACGAGGACCTCTC
GCCCTCTGAGGTCAACGCCATCCAGGAGAACATCGAGTACTACGTCTCCC
AGGTTAGTGAGGTTTCTTCTGTAACGGTCTTTTTGTACGCTTGTAGAGTT
TGAGCGCAGTTGCTTTGATCTAGGGAAAGCGCGCGGTTAACGCCAGATAT
GGGGTGTACGGTAAAATCTTCGGGTGATTACTTACCATCTTTTAACCTTG
CGGGCTTTGTTATGGCAACTTTTCACAATTCATTCTGGTTGTTGTTTGCT
TGCGCTCTACCGAACACTCTTTTCTTTTCCTTTCTCGCCCTTTCACACAG
GGCAACGACGTGGAGAGCATCGACAAGTTTGGAGAGGACACGTACGACCA
CTTCTACGAAGACCTTTCCCTCGACGAGTTCCCCGTTGGCGGGCCCGGCG
TGCTGCTCGGCAAGGGCCGCCGCCTGCCCACCATGAACGAAGAAGACGAG
GAGGGGGATGGCGACGACGAGAGCAGCAAAGAGGCGGCTCCGACGCCGGC
GGCTAAGGAGAACAAGGGCGGCAAGGCGGCCAAGCGCGGGGCAAAGGCGG
CAGCGGCGGCTGCGGCCGCGGCGGCGGCGACCGTGGCGGCGCCCGCGGCG
TCGGCGGCGCCGGCGGCCATGGGGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7717:189..2815+

>mRNA_P-wetherbeei_contig7717.1.1 ID=mRNA_P-wetherbeei_contig7717.1.1|Name=mRNA_P-wetherbeei_contig7717.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig7717:189..2815+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGCCAATAGAAAGGTTCAGGCCGAAATTGACCGTACGATGAAGAA
GGTGGACGAGGGCGTGGCCCTATTCGACGAGATCTACGAGAAGGTCATGT
CGGCGACGCAGCCCAACCAAAAGGAGAAGTACGAGTCCGACCTCAAGAAG
GAGATCAAGAAGCTGCAGCGCAGCCGCGACACCATCAAATCGTGGATCGC
GAGCAGCGAGATCAAGGACAAGGTCGCTTTAATGGACGCCCGGAAGAGAA
TAGAGGCGAAAATGGAGCAGTTCAAGGTGTGCGAGAAGGAGACCAAGACG
AAGGCCTTTTCGAAGGAGGGGCTGGCCAAGGCGGTGGAGAAGGACCCCGA
CGAGGTGGAGCGTGAGAGCAGCCGCGCCTGGCTCCAGGAAGGCCTCGACA
AACTCCAGGAGCAGCTGGACGGGTTCGAGGCAGACGTGGAGCGGCTGACA
GGCGGCAAGAAGAAAAAGTCGGATGTGGCGCGCGTCGAGGTGCTCGAGAA
CGGCATCGCGCAGCACCGCTTCCACATCGGCAAGCTCGAGCAGATCATGC
GACTGCTCGATAACGAGGACCTCTCGCCCTCTGAGGTCAACGCCATCCAG
GAGAACATCGAGTACTACGTCTCCCAGGTTAGTGAGGGCAACGACGTGGA
GAGCATCGACAAGTTTGGAGAGGACACGTACGACCACTTCTACGAAGACC
TTTCCCTCGACGAGTTCCCCGTTGGCGGGCCCGGCGTGCTGCTCGGCAAG
GGCCGCCGCCTGCCCACCATGAACGAAGAAGACGAGGAGGGGGATGGCGA
CGACGAGAGCAGCAAAGAGGCGGCTCCGACGCCGGCGGCTAAGGAGAACA
AGGGCGGCAAGGCGGCCAAGCGCGGGGCAAAGGCGGCAGCGGCGGCTGCG
GCCGCGGCGGCGGCGACCGTGGCGGCGCCCGCGGCGTCGGCGGCGCCGGC
GGCCATGGGGCGC
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