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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2810 |
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Cds size | 1932 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186996.2965586-UTR-P-wetherbeei_contig771:4833..4911 | 1683186996.2965586-UTR-P-wetherbeei_contig771:4833..4911 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig771 4834..4911 + |
| 1683186996.3261755-UTR-P-wetherbeei_contig771:7079..7879 | 1683186996.3261755-UTR-P-wetherbeei_contig771:7079..7879 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig771 7080..7879 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186996.306222-CDS-P-wetherbeei_contig771:4911..5087 | 1683186996.306222-CDS-P-wetherbeei_contig771:4911..5087 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig771 4912..5087 + |
| 1683186996.3163178-CDS-P-wetherbeei_contig771:5323..7079 | 1683186996.3163178-CDS-P-wetherbeei_contig771:5323..7079 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig771 5324..7079 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig771.3.1 >prot_P-wetherbeei_contig771.3.1 ID=prot_P-wetherbeei_contig771.3.1|Name=mRNA_P-wetherbeei_contig771.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=644bp
MKRSVPCGCCVVLAFLGAATLVADGALVQARARELLKEDIPERLNAFAHA
AKRLTIPERDWWSVSSSTASHGLKKFLQLVAHLMDALKETVCRSFAAADH
SARVFRAVAAAIHANFRRWYHYKAAPWMRRCRQSSHTFLTEAWRQFEVET
TQFRREVAPAGRSLRADAAREWRDTALPRLRRAGLKLREYGELGRELMRQ
RLSYGFYDSYGDGYDAEEEDECGDDDWYGEKGYDDSYDDGEEEVEHSDVG
SEEEDKTTAAAGTSEGLTERGNEDVLGEACAETSPAGAAAAATATVDNVH
GGLGGQTAHLSPQGLSHGSSGAGEDGGAASSRASEVSAGGWLLEGSEQKQ
RWERTARILRLRKETGNTPPWYWMPDAVGPADVAYVSVQGAEGVVELSEA
ITARPPSIPTAPASAAATAAAAGEGGGAGSRGCGGAIGTLDGGYCICPAP
APAAPACPASLLSGIAAATAFLTLLVAGTWRRATGGGRGLALTFRAASGG
ASAFASAASGKRSTAAPAADAAAGTLLSWQPGCCCGKDDDGEGGDKGGDD
WWFGSEFKLHGLNGSGDAAAGGGTPAAAAVTAAAAAVAAVADAKWSPSCS
EPVLVSPIGSGSVGSCGSGERFEKSWVDVSRDTGGDGCCAPNN* back to topmRNA from alignment at P-wetherbeei_contig771:4834..7879+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig771.3.1 ID=mRNA_P-wetherbeei_contig771.3.1|Name=mRNA_P-wetherbeei_contig771.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3046bp|location=Sequence derived from alignment at P-wetherbeei_contig771:4834..7879+ (Phaeothamnion wetherbeei SAG_119_79)
ATTAGACTTGGGAAGCAACTGCCGAACTCTTTTCACGCGCAACAATCTTT
TCATCCTTTCCCATTTCACCAGCAAATTATGAAGCGGAGCGTGCCCTGTG
GGTGCTGCGTGGTTCTGGCGTTCCTCGGCGCCGCCACTCTCGTCGCTGAT
GGCGCGCTGGTACAAGCTCGCGCCCGTGAGCTACTCAAAGAGGACATCCC
GGAGCGTCTGAACGCGTTTGCTCACGCTGCAAAGAGACTAACGATCCCCG
AGAGGTAACTCTTGATTGAAAAGAATGACGGACGCTTCCTTTATACTAAC
GAGACGAATGATTTCTCCTCTCTTCTTTCTTGTACCTGCCGTGGTTTCCG
AGATTGACGCAGACAACCTACTCCATACCTTCCCTCATCTTCCCTCGTGC
GCTTTCCCGCCCATGTACGCCTGTTCCCGTGCTCTTTACTTCCCCTGCGT
GTGTTGTCTTGGTCGGGCTGAAACCCGAACCCCGACGCAGGGATTGGTGG
AGCGTATCTTCGAGCACCGCCTCCCATGGCCTGAAGAAGTTCCTCCAGCT
CGTCGCGCATCTCATGGACGCCCTGAAAGAGACCGTTTGCCGCTCCTTCG
CGGCCGCCGACCACTCCGCACGTGTGTTCCGCGCCGTGGCGGCCGCCATA
CATGCCAACTTCCGGCGCTGGTATCACTACAAAGCGGCGCCGTGGATGCG
GCGCTGCCGGCAATCGTCGCACACCTTCCTTACGGAGGCGTGGCGGCAGT
TCGAGGTGGAGACTACTCAGTTCCGTCGCGAGGTGGCGCCCGCCGGTAGG
AGTCTCCGTGCCGACGCCGCGCGAGAGTGGCGCGACACGGCGCTGCCGCG
GCTGCGCCGCGCCGGGCTAAAGCTGCGCGAGTACGGCGAGCTGGGGCGGG
AGCTGATGCGGCAGCGGTTATCCTACGGGTTTTACGACAGTTACGGCGAC
GGTTATGACGCTGAGGAGGAGGACGAATGTGGCGACGACGACTGGTACGG
CGAAAAAGGTTATGACGACAGTTACGATGACGGCGAAGAGGAGGTGGAGC
ACAGCGACGTCGGATCCGAAGAAGAAGATAAGACGACGGCGGCGGCCGGC
ACCAGCGAAGGGCTGACGGAGCGAGGCAACGAAGACGTCTTGGGCGAGGC
GTGTGCTGAGACATCGCCAGCGGGGGCGGCAGCAGCGGCAACCGCCACTG
TAGACAACGTTCATGGCGGCCTCGGCGGCCAGACGGCACATCTCTCGCCG
CAGGGACTTTCGCACGGTTCCTCTGGCGCCGGGGAGGACGGCGGGGCCGC
CAGCAGTCGCGCGTCGGAAGTGTCGGCGGGTGGTTGGCTTCTGGAGGGGT
CGGAGCAAAAGCAGCGGTGGGAACGAACGGCGCGTATCCTTCGGCTTCGC
AAAGAAACCGGCAACACTCCTCCGTGGTATTGGATGCCCGATGCCGTGGG
GCCCGCAGACGTCGCCTATGTTAGCGTGCAGGGTGCGGAAGGCGTGGTTG
AACTGTCCGAAGCTATCACTGCGAGACCTCCCAGCATCCCCACCGCACCC
GCTTCCGCGGCCGCCACTGCTGCCGCTGCAGGCGAGGGCGGCGGCGCCGG
CTCTCGCGGCTGCGGCGGCGCTATCGGCACCCTCGACGGGGGTTACTGCA
TCTGTCCAGCGCCGGCGCCCGCTGCCCCCGCGTGCCCGGCGAGCCTGCTC
TCCGGCATCGCCGCGGCCACCGCGTTCCTGACTCTGCTCGTCGCTGGCAC
ATGGCGACGGGCCACGGGCGGCGGCCGCGGCTTGGCGCTCACCTTCCGCG
CCGCCTCAGGCGGCGCCAGTGCCTTCGCCTCCGCCGCCTCTGGCAAGCGC
TCGACGGCGGCGCCGGCTGCCGATGCGGCGGCCGGGACGCTCCTGTCCTG
GCAGCCGGGCTGTTGCTGCGGCAAAGACGACGACGGCGAAGGCGGCGATA
AAGGCGGCGACGACTGGTGGTTCGGATCCGAGTTCAAGCTGCACGGGCTC
AACGGTTCCGGGGACGCCGCGGCCGGCGGCGGAACGCCGGCGGCGGCGGC
GGTGACAGCGGCGGCGGCGGCGGTGGCGGCTGTAGCGGACGCCAAGTGGT
CACCGTCGTGCAGCGAGCCAGTCCTTGTTTCTCCGATCGGCAGCGGCAGC
GTCGGCAGCTGCGGCAGCGGGGAGAGGTTCGAGAAGAGCTGGGTCGACGT
GAGCCGCGACACCGGCGGCGACGGCTGCTGCGCGCCGAATAACTAAATAC
GGGGGTGCAAAGAGTTTATAGATGTGTGAAAAGATTGATGGGGCTGTCCT
CCGTCGGGGAGCTCGTCAAGTAACGGCTCCGCCCATCGCCTGCGGCTGTG
TTTCTAGTGAAGATGCCGCGACGAGGTGGCGTTGACAAAAGTCAGCTCTG
GAATTAACCAGCTCTGGCAAAAATGCCTCCTCGTTGTGCCGCAGCTGGCC
GAGCCTCGCTCCATGAAGGCGGGGGCGGCGGCTGCGGTGACGGCTGTCAT
TTTGCGCGTAATTCTTTCCCCAACCAGCGCATTACGGCCTGGGCCGTTCA
ATAATGCGCACGCTGCTCCAGGAACCCTTTCGCAGCCGGCCGCGACGCTG
GCGGCGGCTACAGCAGCTACGCGCCGGAGGCGGCTCGAGCCGCCACAACG
GTCCCGACGGGAACAGCGGCTGCGACGCAGCGGCTCCCCGCCGTGCTGGT
GCTGCGATGCTGATAGTGGAAGACCTGCAACACCGGTGGCGGGGCGGCAC
GGCGGCAGCATTTCTCCTGTAGGGCACAAACATCTCCCTCGTCAGTGGCG
CGCTGCCGTTTGGAGGCGGCGGGCGAAGGACGGTTCTGGCCGTTAATGTG
TGAATAGCAGGGGGGAGGGTGGGAGAGAAAGACAGGGCGAGGAAAGGGTT
GTCGAAAGGCGGACGTGGTGCGGTGCGCAAAAGGACACCTGCAACTGCTG
TGCATTGGGGGATTGGCAAAGAGGGAAGAAGGGGACTGGGGGAGCGGGGA
ATACGGTACAGCACGGGGCAGGGAGCGGACTGGAAGCTTTTGGGGG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig771:4834..7879+ >mRNA_P-wetherbeei_contig771.3.1 ID=mRNA_P-wetherbeei_contig771.3.1|Name=mRNA_P-wetherbeei_contig771.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1932bp|location=Sequence derived from alignment at P-wetherbeei_contig771:4834..7879+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGCGGAGCGTGCCCTGTGGGTGCTGCGTGGTTCTGGCGTTCCTCGG
CGCCGCCACTCTCGTCGCTGATGGCGCGCTGGTACAAGCTCGCGCCCGTG
AGCTACTCAAAGAGGACATCCCGGAGCGTCTGAACGCGTTTGCTCACGCT
GCAAAGAGACTAACGATCCCCGAGAGGGATTGGTGGAGCGTATCTTCGAG
CACCGCCTCCCATGGCCTGAAGAAGTTCCTCCAGCTCGTCGCGCATCTCA
TGGACGCCCTGAAAGAGACCGTTTGCCGCTCCTTCGCGGCCGCCGACCAC
TCCGCACGTGTGTTCCGCGCCGTGGCGGCCGCCATACATGCCAACTTCCG
GCGCTGGTATCACTACAAAGCGGCGCCGTGGATGCGGCGCTGCCGGCAAT
CGTCGCACACCTTCCTTACGGAGGCGTGGCGGCAGTTCGAGGTGGAGACT
ACTCAGTTCCGTCGCGAGGTGGCGCCCGCCGGTAGGAGTCTCCGTGCCGA
CGCCGCGCGAGAGTGGCGCGACACGGCGCTGCCGCGGCTGCGCCGCGCCG
GGCTAAAGCTGCGCGAGTACGGCGAGCTGGGGCGGGAGCTGATGCGGCAG
CGGTTATCCTACGGGTTTTACGACAGTTACGGCGACGGTTATGACGCTGA
GGAGGAGGACGAATGTGGCGACGACGACTGGTACGGCGAAAAAGGTTATG
ACGACAGTTACGATGACGGCGAAGAGGAGGTGGAGCACAGCGACGTCGGA
TCCGAAGAAGAAGATAAGACGACGGCGGCGGCCGGCACCAGCGAAGGGCT
GACGGAGCGAGGCAACGAAGACGTCTTGGGCGAGGCGTGTGCTGAGACAT
CGCCAGCGGGGGCGGCAGCAGCGGCAACCGCCACTGTAGACAACGTTCAT
GGCGGCCTCGGCGGCCAGACGGCACATCTCTCGCCGCAGGGACTTTCGCA
CGGTTCCTCTGGCGCCGGGGAGGACGGCGGGGCCGCCAGCAGTCGCGCGT
CGGAAGTGTCGGCGGGTGGTTGGCTTCTGGAGGGGTCGGAGCAAAAGCAG
CGGTGGGAACGAACGGCGCGTATCCTTCGGCTTCGCAAAGAAACCGGCAA
CACTCCTCCGTGGTATTGGATGCCCGATGCCGTGGGGCCCGCAGACGTCG
CCTATGTTAGCGTGCAGGGTGCGGAAGGCGTGGTTGAACTGTCCGAAGCT
ATCACTGCGAGACCTCCCAGCATCCCCACCGCACCCGCTTCCGCGGCCGC
CACTGCTGCCGCTGCAGGCGAGGGCGGCGGCGCCGGCTCTCGCGGCTGCG
GCGGCGCTATCGGCACCCTCGACGGGGGTTACTGCATCTGTCCAGCGCCG
GCGCCCGCTGCCCCCGCGTGCCCGGCGAGCCTGCTCTCCGGCATCGCCGC
GGCCACCGCGTTCCTGACTCTGCTCGTCGCTGGCACATGGCGACGGGCCA
CGGGCGGCGGCCGCGGCTTGGCGCTCACCTTCCGCGCCGCCTCAGGCGGC
GCCAGTGCCTTCGCCTCCGCCGCCTCTGGCAAGCGCTCGACGGCGGCGCC
GGCTGCCGATGCGGCGGCCGGGACGCTCCTGTCCTGGCAGCCGGGCTGTT
GCTGCGGCAAAGACGACGACGGCGAAGGCGGCGATAAAGGCGGCGACGAC
TGGTGGTTCGGATCCGAGTTCAAGCTGCACGGGCTCAACGGTTCCGGGGA
CGCCGCGGCCGGCGGCGGAACGCCGGCGGCGGCGGCGGTGACAGCGGCGG
CGGCGGCGGTGGCGGCTGTAGCGGACGCCAAGTGGTCACCGTCGTGCAGC
GAGCCAGTCCTTGTTTCTCCGATCGGCAGCGGCAGCGTCGGCAGCTGCGG
CAGCGGGGAGAGGTTCGAGAAGAGCTGGGTCGACGTGAGCCGCGACACCG
GCGGCGACGGCTGCTGCGCGCCGAATAACTAA back to top
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