mRNA_P-wetherbeei_contig7703.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7703.1.1
Unique NamemRNA_P-wetherbeei_contig7703.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: D8LF20_ECTSI (Non-specific serine/threonine protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF20_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 7.740e-27
Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 1 
Query:   67 LVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            +V IDFGL  +KPLPEDKAVDLYVLERAF+STH  ++PLV E MRAY+A SR A ATL++L+ VR+RGRKR+MFG
Sbjct:  142 VVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 216
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: A0A7S2V229_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V229_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.400e-25
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 1 
Query:   67 LVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            LVVIDFGLG  +PL EDKAVDLYVLERAF+STHAGSEPLV E ++ Y+ATS+ + + L RLA+VRKRGRKR+ FG
Sbjct:  179 LVVIDFGLGSMQPLVEDKAVDLYVLERAFLSTHAGSEPLVEEVLQQYKATSKKSDSVLARLADVRKRGRKRECFG 253
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: A0A6G0XQZ6_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQZ6_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.480e-23
Identity = 50/75 (66.67%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   67 LVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            + VIDFGL  ++PLPEDKAVDLYV+ERAF STH  S+PLVAE +RAY+A SR + AT +RL  VR RGRKR+M G
Sbjct:  148 ITVIDFGLANSQPLPEDKAVDLYVMERAFQSTHVNSDPLVAEILRAYKAKSRRSDATFHRLYQVRSRGRKRNMVG 222
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: W4FZ43_9STRA (Non-specific serine/threonine protein kinase n=3 Tax=Aphanomyces TaxID=100860 RepID=W4FZ43_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.500e-22
Identity = 50/75 (66.67%), Postives = 59/75 (78.67%), Query Frame = 1 
Query:   67 LVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            + VIDFGL  ++PLPEDKAVDLYV+ERAF STH  SEPLVAE +RAY+A SR + AT ++L  VR RGRKR M G
Sbjct:  152 ITVIDFGLANSQPLPEDKAVDLYVMERAFQSTHVHSEPLVAEILRAYKAKSRRSDATFHKLYQVRSRGRKRTMVG 226
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: A0A024TKU5_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKU5_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.500e-22
Identity = 51/83 (61.45%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:   43 MAETDRPPLVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            M + D   + VIDFGL  ++PLPEDKAVDLYV+ERAF STH  SEPLVAE +RAY+A SR + A  ++L  VR RGRKR M G
Sbjct:  144 MKKADTTSITVIDFGLANSQPLPEDKAVDLYVMERAFQSTHVHSEPLVAEILRAYKAKSRRSDAIFHKLYQVRSRGRKRTMVG 226
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: A0A425BXF7_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425BXF7_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.420e-21
Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 1 
Query:   67 LVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            + +IDFGL  ++PLPEDKAVDLYV+ERAF STH  SE LV E +RAY ATSR + +   +L+ VR RGRKR M G
Sbjct:   27 VTMIDFGLANSQPLPEDKAVDLYVMERAFASTHVNSELLVEEVLRAYRATSRRSDSIFQKLSQVRMRGRKRTMVG 101
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: A0A8K1CI69_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI69_PYTOL)

HSP 1 Score: 92.8 bits (229), Expect = 3.020e-21
Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 1 
Query:   67 LVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            + VIDFGL  ++PLPEDKAVDLYV+ERAF STH  SE LVAE +RAY+A SR A +T  +LA VR RGRKR M G
Sbjct:  148 VTVIDFGLANSQPLPEDKAVDLYVMERAFDSTHINSELLVAEVLRAYKACSRRADSTFQKLAAVRLRGRKRTMVG 222
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: A0A5D6XIU3_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIU3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.260e-21
Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 1 
Query:   67 LVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            + +IDFGL  T+PLPEDKAVDLYV+ERAF STH  SE LVAE +RAY+A+SR A +   +L+ VR RGRKR M G
Sbjct:  132 ITMIDFGLANTQPLPEDKAVDLYVMERAFDSTHVQSEALVAEVLRAYKASSRRADSIFQKLSQVRLRGRKRTMVG 206
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: A0A2D4BFR4_PYTIN (Non-specific serine/threonine protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFR4_PYTIN)

HSP 1 Score: 90.5 bits (223), Expect = 2.410e-20
Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 1 
Query:   43 MAETDRPPLVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            ++  D   + +IDFGL  ++PLPEDKAVDLYV+ERAF STH  SE LV E +RAY+A SR + AT  +LA VR RGRKR M G
Sbjct:  141 LSSPDAVNVTIIDFGLANSQPLPEDKAVDLYVMERAFNSTHINSEILVDEVLRAYKACSRRSDATFQKLAAVRLRGRKRTMVG 223
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BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Match: A0A484DWU1_BRELC (Non-specific serine/threonine protein kinase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWU1_BRELC)

HSP 1 Score: 90.5 bits (223), Expect = 2.930e-20
Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 1 
Query:   67 LVVIDFGLGLTKPLPEDKAVDLYVLERAFVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG 291
            + +IDFGL  ++PLPEDKAVDLYV+ERAF STH  SE LVA  +RAY A SR A A   +L+ VR RGRKR M G
Sbjct:  159 VTLIDFGLATSQPLPEDKAVDLYVMERAFASTHVNSEILVANVLRAYRAKSRRADAIFQKLSQVRLRGRKRTMIG 233
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7703.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF20_ECTSI7.740e-2770.67Non-specific serine/threonine protein kinase n=2 T... [more]
A0A7S2V229_9STRA1.400e-2572.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6G0XQZ6_9STRA3.480e-2366.67Non-specific serine/threonine protein kinase n=1 T... [more]
W4FZ43_9STRA1.500e-2266.67Non-specific serine/threonine protein kinase n=3 T... [more]
A0A024TKU5_9STRA1.500e-2261.45Non-specific serine/threonine protein kinase n=1 T... [more]
A0A425BXF7_9STRA2.420e-2161.33Non-specific serine/threonine protein kinase n=2 T... [more]
A0A8K1CI69_PYTOL3.020e-2166.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XIU3_9STRA4.260e-2164.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A2D4BFR4_PYTIN2.410e-2059.04Non-specific serine/threonine protein kinase n=1 T... [more]
A0A484DWU1_BRELC2.930e-2062.67Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7703contigP-wetherbeei_contig7703:1901..2870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog157072.XP_008876715.1
Preferred nameTP53RK
PFAMsKdo,Pkinase
Model size294
Max annot lvl2759|Eukaryota
KEGG koko:K02154,ko:K08851,ko:K09140
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko04721,ko04966,ko05110,ko05120,ko05152,ko05165,ko05323,map00190,map01100,map04142,map04145,map04721,map04966,map05110,map05120,map05152,map05165,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000278,GO:0000281,GO:0000282,GO:0000408,GO:0000722,GO:0000723,GO:0000910,GO:0001558,GO:0002039,GO:0002949,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006312,GO:0006355,GO:0006357,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007049,GO:0007163,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0016043,GO:0016070,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019954,GO:0022402,GO:0023051,GO:0023056,GO:0030010,GO:0030154,GO:0030307,GO:0030435,GO:0030436,GO:0030447,GO:0030448,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032200,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0036211,GO:0040007,GO:0040008,GO:0040014,GO:0040018,GO:0042592,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043934,GO:0043936,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045927,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048638,GO:0048639,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051276,GO:0051301,GO:0060249,GO:0060255,GO:0061640,GO:0065007,GO:0065008,GO:0070013,GO:0070525,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901796,GO:1902531,GO:1902533,GO:1902680,GO:1903047,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons3
Evalue2.45e-23
EggNOG OGsCOG3642@1|root,KOG3087@2759|Eukaryota
Ec32 ortholog descriptionSerine/threonine protein kinase
Ec32 orthologEc-21_006400.1
EC2.7.11.1
DescriptiontRNA threonylcarbamoyladenosine metabolic process
Cds size294
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03009,ko03016,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186995.837259-CDS-P-wetherbeei_contig7703:1900..19841683186995.837259-CDS-P-wetherbeei_contig7703:1900..1984Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7703 1901..1984 -
1683186995.847656-CDS-P-wetherbeei_contig7703:2328..24181683186995.847656-CDS-P-wetherbeei_contig7703:2328..2418Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7703 2329..2418 -
1683186995.8557737-CDS-P-wetherbeei_contig7703:2750..28701683186995.8557737-CDS-P-wetherbeei_contig7703:2750..2870Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7703 2751..2870 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7703.1.1prot_P-wetherbeei_contig7703.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7703 1901..2870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7703.1.1

>prot_P-wetherbeei_contig7703.1.1 ID=prot_P-wetherbeei_contig7703.1.1|Name=mRNA_P-wetherbeei_contig7703.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=98bp
SSGTLLPRPAAAAAMAETDRPPLVVIDFGLGLTKPLPEDKAVDLYVLERA
FVSTHAGSEPLVAEAMRAYEATSRDAKATLNRLANVRKRGRKRDMFG*
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mRNA from alignment at P-wetherbeei_contig7703:1901..2870-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7703.1.1 ID=mRNA_P-wetherbeei_contig7703.1.1|Name=mRNA_P-wetherbeei_contig7703.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=970bp|location=Sequence derived from alignment at P-wetherbeei_contig7703:1901..2870- (Phaeothamnion wetherbeei SAG_119_79)
TCGTCTGGGACGCTGCTGCCGCGGCCGGCGGCTGCAGCAGCGATGGCCGA
AACTGACCGACCGCCACTCGTCGTCATTGACTTTGGGCTGGGGTTGACAA
AGCCGCTGCCAGAAGATAAGGTGAGGCCGATTGAACATGTTTGAGCAAAG
CGCTTTTCCCGTAACGGGGACGCGGTCGACCTTGCTTCCGAGAGCCAGCA
GACAATGGAGGTTATTGAAACCGTCTGCTGCTTTGACATGGCGCTTTTCC
GGGCCTGATGGATGGATACTGGCATGCCTTTTATAGTGCACTCCTCAGCA
CAACTGTGTTTTCATGAACTTGCAACGCTAACGGTGCAACTGTGCTGTCT
ACGTGCTTTTGCGTGCCGCCCCTTCCTTGCTTCCGCGCGGAACCGGGTTT
GATTCTCCGAGCTCCTGTTTCTCTCTCACGAATGACTGCCCCATATGCGA
AGGCGGTGGACCTTTACGTGCTGGAGCGGGCGTTCGTCAGCACACATGCC
GGCTCGGAGCCGCTTGTGGCGGAAGCAATGAGGGCATACGAGGTGGGTTG
AGGACTGAAGCCGGAGCAGTCCGTTGAGCCTGAGGTAGATATGGAGGGCA
GTTTGGCAGCTGCTATGTTATGGCGGTATTCGGGATCGGGGTTTCGTATC
GGGTTAGGAGACGTGTCCTGGCGTGGCGGTGCATGCGAAGACGGACAGGT
AGCAAGGAGCCTGATGGAGGCTTTATCATAACGGAACCGTCCTCGCTCAT
TTTAACCACAGCTTGCCACTTGTCGACTTTGCTTATCTTGCCTGCCCGTC
AGTCCGCTTCTGATTGCTTTTGTCTTGGCATTCCTCTTTTCTCCCGCTAT
CCTGCTTTGCTTGTTCCCTGACCGGCTGGTCGGCAGGCGACGTCGCGGGA
CGCCAAGGCCACGCTGAATCGACTGGCGAACGTCCGGAAGCGCGGGCGCA
AGAGGGATATGTTTGGATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7703:1901..2870-

>mRNA_P-wetherbeei_contig7703.1.1 ID=mRNA_P-wetherbeei_contig7703.1.1|Name=mRNA_P-wetherbeei_contig7703.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=294bp|location=Sequence derived from alignment at P-wetherbeei_contig7703:1901..2870- (Phaeothamnion wetherbeei SAG_119_79)
TCGTCTGGGACGCTGCTGCCGCGGCCGGCGGCTGCAGCAGCGATGGCCGA
AACTGACCGACCGCCACTCGTCGTCATTGACTTTGGGCTGGGGTTGACAA
AGCCGCTGCCAGAAGATAAGGCGGTGGACCTTTACGTGCTGGAGCGGGCG
TTCGTCAGCACACATGCCGGCTCGGAGCCGCTTGTGGCGGAAGCAATGAG
GGCATACGAGGCGACGTCGCGGGACGCCAAGGCCACGCTGAATCGACTGG
CGAACGTCCGGAAGCGCGGGCGCAAGAGGGATATGTTTGGATGA
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