mRNA_P-wetherbeei_contig7693.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: A0A6H5L2U2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2U2_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.480e-33 Identity = 81/178 (45.51%), Postives = 111/178 (62.36%), Query Frame = 1
Query: 1 LQEKVNAMIREEMERMAPRDYLQGRHAAKSRLRSPLLLAEMARLAAGKPMAPMDVARYEVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAARKNLQIAVAIGRMLAEVK 534
++E V+++I EEM P DYL + +R +SPLL +E AR+ A KP+ +D +RY++ PP D W++++ NARAQ EHQ NRLLNLELLQN GA L HN A E A+ ++A+RA E VN+ R+T+QEAA TL+NL R KN+QI +A + AEVK
Sbjct: 35 MKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPLDVIDTSRYDLQPPQGAAAEDEAAWKRALDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAEKTLWNLARKRSEGFDKNVQIQLACEGLRAEVK 212
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: A0A835YMV2_9STRA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV2_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.690e-24 Identity = 74/180 (41.11%), Postives = 99/180 (55.00%), Query Frame = 1
Query: 4 QEKVNAMIREEMERMAPRDYLQGRHAAKSRL---RSPLLLAEMARLAAGKPMAPMDVARYEVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAARKNLQIAVAIGRMLAEVK 534
QE V+ +I EEM R P++YL+ R L + +L AE+AR++ G PMA +D RYEV P DL WR +V NA+AQL HQ NR LNLELL N GA L HN AL + A +R +++N R+ AQ L++L R A KNLQIA+A + ++K
Sbjct: 24 QEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLK 203
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: W7TEH7_9STRA (Breast carcinoma amplified sequence 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEH7_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.390e-23 Identity = 71/178 (39.89%), Postives = 97/178 (54.49%), Query Frame = 1
Query: 10 KVNAMIREEME--RMAPRDYLQGRHAAKSRLRSPLLLA-EMARLAAGKPMAPMDVARYEVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAARKNLQIAVAIGRMLAEVK 534
+V+ +I EEM R RDYL R + +A E+ R+AAGKPMAP+D +RY P GL+ DLQ WR ++ N RAQ EH NR++N+ELLQN LA+N LE L+ + E +N++R+T QE AP L NLT R NL++ A + E+K
Sbjct: 43 RVDQLILEEMRNPRFPKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAELINLSRKTKQEEVAPRLSNLTRKRDETLYTNLELQKACAMLRMEIK 220
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.950e-22 Identity = 71/178 (39.89%), Postives = 98/178 (55.06%), Query Frame = 1
Query: 10 KVNAMIREEME--RMAPRDYLQGRHAAKSRLRSPLLLA-EMARLAAGKPMAPMDVARYEVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAARKNLQIAVAIGRMLAEVK 534
+V+ +I EEM R + RDYL R + +A E+ R+AAGKPMAP+D +RY P GL+ DLQ WR ++ N RAQ EH NR++N+ELLQN LA+N LE L+ + E +N++R+T QE AP L NLT R NL++ A + E+K
Sbjct: 27 RVDQLILEEMRNPRFSKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAECINLSRKTKQEEVAPRLSNLTRKRDEILYTNLELQKACAMLRMEIK 204
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: A0A5J4YGH3_9CHLO (Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGH3_9CHLO) HSP 1 Score: 87.4 bits (215), Expect = 1.020e-17 Identity = 56/143 (39.16%), Postives = 78/143 (54.55%), Query Frame = 1
Query: 103 PLLLAEMARLAAGKPMAPMDVARYEVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAARKNLQIAVAIGRMLAEV 531
P+L E AR+ AGK M MD +R+ + PP A +ND WR + NA +QLEHQ NRLLNLELL G R HN +LE LE ++ +S+N R+ +QE+ L + A KN++I +A + +EV
Sbjct: 71 PILQHEFARVKAGKQMEAMDTSRFHLTPPPASKQNDFSAWRAATDNAHSQLEHQYNRLLNLELLLRFGPNARRVHNKSLEGQVHRLEKEIEQLQQQKDSINRQRKLSQESDGRALQQMEQQYTALVAKNMEINMACQELESEV 213
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: A0A0M0JYG4_9EUKA (Pre-mRNA-splicing factor spf27-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYG4_9EUKA) HSP 1 Score: 82.8 bits (203), Expect = 3.490e-16 Identity = 66/176 (37.50%), Postives = 98/176 (55.68%), Query Frame = 1
Query: 10 KVNAMIREEMERMAPRDYLQGRHAAKSRLRSP---LLLAEMARLAAGKPMAPMDVARYEVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAARKNLQIAVAIGRMLAE 528
+V+++++ EM P +YL H + + P +L E R+ +PM+ MD RY++ PP +ND + W+++V NA AQLEHQS RL NLEL+Q GA A L+ A+ L+ A+ E VN R+T Q AAAP L L A ++ +KNL+I A ++ AE
Sbjct: 42 RVDSLVQAEMRTFRPGNYLA--HLPEHEVNFPEDSVLQYEWMRVCEQQPMSKMDTKRYQLEPPPPEQRNDPEAWQRAVRNAEAQLEHQSTRLGNLELMQQHGAHQWRAQLNELDVASAQLKRAAEEVDERIELVNRRRKTEQLAAAPRLAALEAEWVSSVKKNLEIESACLQLEAE 215
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: F0YRZ0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRZ0_AURAN) HSP 1 Score: 82.8 bits (203), Expect = 3.680e-16 Identity = 62/131 (47.33%), Postives = 79/131 (60.31%), Query Frame = 1
Query: 97 RSPLLLAEMARLAAGKPMAPMDVARY--EVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAAR 483
RS +L AE+AR A+G +AP++V+RY + PP +G WR + NA AQL HQ+NR++NLEL + G H A L AA DAL A A+ A AA E VN ARR QE AP + L A R+ AAR
Sbjct: 83 RSAVLEAELARAASGADLAPLEVSRYACDAPPDGSGAA----AWRAAADNAAAQLGHQANRVVNLELAEAFGEAAWRRHAADLAAARDALRASARGARAAAERVNAARRADQERLAPEI--LRAERRCAAR 207
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: A0A8H7UHL7_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UHL7_MORIS) HSP 1 Score: 80.1 bits (196), Expect = 2.680e-15 Identity = 59/169 (34.91%), Postives = 90/169 (53.25%), Query Frame = 1
Query: 1 LQEKVNAMIREEMERMAPRDYLQGRHAAKSRLRSPLLLAEMARLAAGKPMAPMDVARYEVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAARKNLQIAVA 507
++EKV+ +I +EM R++ +D +Q P+L +E AR + KPMA +D++RY+V PPA K ++ W+ +V N++AQLE Q+ RL NLELLQ G+ HN LE L+ + +N R+ Q TL NL + + LQ+ VA
Sbjct: 26 MKEKVDLLIEQEMRRISRKDRVQLPKDITLFKDDPVLSSEWARTSKQKPMATLDISRYDVAPPAGKDKQSVEAWQAAVDNSKAQLESQTLRLFNLELLQKYGSNAWKVHNFQLEGQLKQLKYNVEEKKKEISELNKQRKFEQTEGGTTLRNLESKWSDLVSQTLQVEVA 194
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: A0A8J5XLH5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XLH5_DIALT) HSP 1 Score: 79.7 bits (195), Expect = 3.540e-15 Identity = 65/178 (36.52%), Postives = 95/178 (53.37%), Query Frame = 1
Query: 1 LQEKVNAMIREEMERMAP-RDYLQGRHAAKSRLR-SPLLLAEMARLAAGKPMAPMDVARYEVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAARKNLQIAVAIGRMLAE 528
++E+V MI EEM+ P RDY+ + L + LL +EM R++ G+ M +D++R ++ PA +ND WR++V NA++QLEHQ+NRL N+EL Q GA AH LE L+ + + E +N R+ Q AA L L AA +KN I A R A+
Sbjct: 21 MRERVRRMIEEEMQTFRPTRDYVAHIRVPELALEETQLLQSEMLRISEGQRMPALDMSRLQMDVPAHNRQNDPAAWRQAVQNAQSQLEHQANRLDNVELFQQHGASAWRAHLVQLEGMVRNLQQQQEEVRTRTEEINKKRKYEQLEAAKKLLALEDEWLAAVQKNRMIEAATERARAD 198
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Match: M5BQM5_THACB (Pre-mRNA-splicing factor SPF27 n=11 Tax=Rhizoctonia solani TaxID=456999 RepID=M5BQM5_THACB) HSP 1 Score: 79.7 bits (195), Expect = 3.610e-15 Identity = 56/146 (38.36%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 97 RSPLLLAEMARLAAGKPMAPMDVARYEVPPPAAGLKNDLQEWRKSVANARAQLEHQSNRLLNLELLQNLGAQGRLAHNAALEAAADALEARAQRAHAAGESVNVARRTAQEAAAPTLFNLTATRQAAARKNLQIAVAIGRMLAEVK 534
++PLL AE+ R+ G+P+ P+D R+++P PA +EW+ S+ NA+AQLEHQ R +NL LLQ GA HN LE A +E + VN AR+ AQ A L L +NLQI++A + AEV+
Sbjct: 56 KNPLLAAELERVERGEPLPPLDTTRHQLPAPADQANATEEEWKNSLQNAKAQLEHQRRRQVNLSLLQTYGANSWKVHNFLLEEDAKNIEKLVETTKEQSTEVNRARKNAQLTAGAQLTALENKWTELISRNLQISMANLALEAEVE 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7693.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7693.1.1 >prot_P-wetherbeei_contig7693.1.1 ID=prot_P-wetherbeei_contig7693.1.1|Name=mRNA_P-wetherbeei_contig7693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp MIREEMERMAPRDYLQGRHAAKSRLRSPLLLAEMARLAAGKPMAPMDVARback to top mRNA from alignment at P-wetherbeei_contig7693:989..1854- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7693.1.1 ID=mRNA_P-wetherbeei_contig7693.1.1|Name=mRNA_P-wetherbeei_contig7693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=866bp|location=Sequence derived from alignment at P-wetherbeei_contig7693:989..1854- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7693:989..1854- >mRNA_P-wetherbeei_contig7693.1.1 ID=mRNA_P-wetherbeei_contig7693.1.1|Name=mRNA_P-wetherbeei_contig7693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig7693:989..1854- (Phaeothamnion wetherbeei SAG_119_79)back to top |